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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra011002.1-P Field mustard nucleus 99.71 97.21
CDY24391 Canola nucleus 89.43 92.6
CDX84999 Canola nucleus 84.29 83.33
CDY16133 Canola nucleus 84.29 82.4
AT1G25560.1 Thale cress nucleus 80.29 77.84
CDX81561 Canola nucleus 69.43 70.85
CDY45849 Canola nucleus, plastid 68.86 68.86
CDX97996 Canola nucleus 60.86 65.54
CDY61361 Canola nucleus 60.86 65.14
CDY72302 Canola nucleus 59.71 64.11
CDY58354 Canola nucleus 59.14 63.5
CDY40973 Canola nucleus 56.29 62.54
KRH34761 Soybean nucleus 61.71 61.54
GSMUA_Achr5P09950_001 Banana nucleus 56.57 61.49
VIT_01s0011g03070.t01 Wine grape nucleus 65.14 60.32
CDX99755 Canola nucleus 58.29 60.0
GSMUA_Achr1P05400_001 Banana nucleus 49.71 58.39
KRG92025 Soybean nucleus 60.29 58.29
KRH75484 Soybean nucleus 62.86 57.29
CDX83547 Canola nucleus 52.86 57.1
KRH70603 Soybean nucleus 63.71 55.61
Solyc05g009790.1.1 Tomato nucleus 61.71 54.68
PGSC0003DMT400002125 Potato nucleus 61.43 54.02
GSMUA_Achr3P29380_001 Banana nucleus 40.57 53.99
TraesCS3D01G260100.1 Wheat nucleus 57.14 53.48
GSMUA_Achr6P09880_001 Banana nucleus 44.0 53.29
TraesCS3A01G259900.1 Wheat nucleus 56.86 53.07
TraesCS3B01G293000.1 Wheat nucleus 57.71 52.74
GSMUA_Achr10P... Banana nucleus 44.0 52.74
GSMUA_Achr4P03670_001 Banana nucleus 44.29 52.72
GSMUA_Achr2P22560_001 Banana nucleus 46.0 51.94
HORVU3Hr1G064640.4 Barley nucleus 55.43 51.05
Zm00001d043782_P001 Maize nucleus 56.29 50.64
Zm00001d009468_P001 Maize nucleus, plastid 53.71 50.13
GSMUA_Achr4P06710_001 Banana nucleus 50.0 50.0
HORVU3Hr1G064590.1 Barley nucleus 27.71 50.0
Os01t0693400-01 Rice nucleus 55.71 49.62
Os05t0549800-01 Rice nucleus 48.57 49.56
GSMUA_AchrUn_... Banana nucleus 52.86 49.47
HORVU4Hr1G074300.4 Barley nucleus 21.14 49.33
TraesCS1B01G392300.1 Wheat nucleus 54.29 48.59
TraesCS1D01G378900.1 Wheat nucleus 54.29 48.47
TraesCS1A01G372300.1 Wheat nucleus 54.29 48.47
HORVU1Hr1G082670.6 Barley nucleus 54.29 48.35
KXG22484 Sorghum nucleus, plastid 56.29 48.28
EES03472 Sorghum nucleus, plastid 56.57 47.94
Zm00001d038907_P001 Maize nucleus, plastid 54.57 47.04
Zm00001d011639_P001 Maize nucleus 54.29 46.91
GSMUA_Achr9P21470_001 Banana nucleus 41.43 46.77
TraesCS1B01G392000.1 Wheat nucleus 54.57 46.47
TraesCS1A01G372200.1 Wheat nucleus 54.0 45.76
TraesCS1D01G378400.1 Wheat nucleus 53.71 45.63
TraesCS1D01G378500.1 Wheat nucleus 53.71 44.87
TraesCS1D01G378800.1 Wheat nucleus 53.14 44.82
TraesCS1B01G392200.1 Wheat nucleus, plastid 53.14 44.71
CDY67348 Canola nucleus 18.57 43.33
TraesCS1A01G372100.1 Wheat nucleus 53.14 42.08
GSMUA_Achr3P21100_001 Banana nucleus 46.86 39.81
CDX73868 Canola nucleus 24.0 35.59
CDY43751 Canola nucleus 24.29 34.98
CDY43060 Canola cytosol 16.29 34.97
CDY62470 Canola nucleus 22.57 34.65
CDX84162 Canola nucleus 23.71 34.16
CDX75073 Canola nucleus 23.71 33.47
CDY08512 Canola nucleus 23.71 33.47
CDY01036 Canola nucleus 24.0 32.68
CDY47260 Canola nucleus 23.71 31.09
CDY69432 Canola nucleus 24.57 30.94
CDY37109 Canola nucleus 29.14 30.63
CDY29620 Canola nucleus 30.0 30.52
CDY22826 Canola nucleus 29.43 30.47
CDY29599 Canola nucleus 28.29 30.46
CDY35575 Canola nucleus 30.0 30.43
CDY51249 Canola nucleus 29.43 30.38
CDY46564 Canola nucleus 29.43 30.38
CDY22814 Canola nucleus 29.14 30.27
CDY65812 Canola nucleus 24.29 30.25
CDX67872 Canola nucleus 24.57 30.18
CDY37130 Canola nucleus 28.86 29.79
CDX80996 Canola nucleus 23.14 29.45
CDX76605 Canola nucleus 24.57 29.45
CDY11388 Canola nucleus 24.57 29.45
CDY25209 Canola nucleus 29.43 29.01
CDX80053 Canola nucleus 24.57 28.96
CDY41564 Canola nucleus 24.57 28.96
CDY27515 Canola nucleus 25.14 28.95
CDY48008 Canola nucleus 25.14 28.95
CDX83351 Canola nucleus 25.14 28.57
CDY15208 Canola nucleus 26.0 28.26
CDY50908 Canola nucleus 25.14 27.94
CDY37108 Canola nucleus, plastid 27.14 27.7
CDY22801 Canola nucleus 27.43 27.59
CDY58763 Canola nucleus 24.57 27.04
CDY58764 Canola nucleus 24.57 26.88
CDX90001 Canola nucleus 26.0 26.45
CDX97251 Canola nucleus 24.29 25.07
CDY07140 Canola nucleus 20.86 23.86
CDY49614 Canola nucleus 20.57 23.23
CDY70080 Canola nucleus 15.43 22.59
CDX98911 Canola nucleus 15.43 22.59
Protein Annotations
MapMan:15.5.5.3MapMan:15.5.7.5Gene3D:2.40.330.10Gene3D:3.30.730.10GO:A0A078HFC4UniProt:A0A078HFC4
InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:B3_DNA-bdEnsemblPlants:CDY36099ProteinID:CDY36099ProteinID:CDY36099.1
InterPro:DNA-bd_dom_sfInterPro:DNA-bd_pseudobarrel_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00059936001InterPro:IPR001471InterPro:IPR003340InterPro:IPR015300InterPro:IPR036955PFAM:PF00847
PFAM:PF02362PFscan:PS50863PFscan:PS51032PANTHER:PTHR31140PANTHER:PTHR31140:SF9SMART:SM00380
SMART:SM01019SUPFAM:SSF101936SUPFAM:SSF54171UniParc:UPI0004EEFBF1SEG:seg:
Description
BnaA08g19490DBnaA08g19490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFC4]
Coordinates
chrLK032367:+:107568..108909
Molecular Weight (calculated)
39409.6 Da
IEP (calculated)
9.878
GRAVY (calculated)
-0.599
Length
350 amino acids
Sequence
(BLAST)
001: MDYSCLDDNT SNTSETLSMS KKTPSPPLPL PPAMRLYRMG SGGSSVVLDL ENGVETESSR KLPSSRFKGV VPQPNGRWGA QIYEKHQRVW LGTFNEEEEA
101: AASYDIAARR FRGRDAVTNF KSPASDAESA FLEAHSKAEV VDMLRKHTYA DELRQSERKK RCEFSKTTVT NENDGVSREV LFEKTVTPSD VGKLNRLVIP
201: KQHAEKHFPL PVTVTPSPTK GVLINLEDRT GKVWRFRYSY WNSSQSYVLT KGWSRFVKEK NLRAGDVVCF ERSSGPDRQL YIDWKVRSGI EKITPVQNVV
301: RLFGVNIFNA TTTNANTNDV VGESGSKKRF REVDLFALGC SKKQAIINVL
Best Arabidopsis Sequence Match ( AT1G25560.1 )
(BLAST)
001: MEYSCVDDSS TTSESLSIST TPKPTTTTEK KLSSPPATSM RLYRMGSGGS SVVLDSENGV ETESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN
101: EEEEAASSYD IAVRRFRGRD AVTNFKSQVD GNDAESAFLD AHSKAEIVDM LRKHTYADEF EQSRRKFVNG DGKRSGLETA TYGNDAVLRA REVLFEKTVT
201: PSDVGKLNRL VIPKQHAEKH FPLPAMTTAM GMNPSPTKGV LINLEDRTGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVCFER STGPDRQLYI
301: HWKVRSSPVQ TVVRLFGVNI FNVSNEKPND VAVECVGKKR SREDDLFSLG CSKKQAIINI L
Arabidopsis Description
TEM1AP2/ERF and B3 domain-containing transcription repressor TEM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6M5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.