Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018894.1-P | Field mustard | nucleus | 99.11 | 99.11 |
| CDY25209 | Canola | nucleus | 96.45 | 91.83 |
| CDY51249 | Canola | nucleus | 73.37 | 73.16 |
| CDY46564 | Canola | nucleus | 73.37 | 73.16 |
| CDY29620 | Canola | nucleus | 73.67 | 72.38 |
| CDY35575 | Canola | nucleus | 73.37 | 71.88 |
| AT1G51120.1 | Thale cress | nucleus | 72.19 | 69.32 |
| AT1G50680.1 | Thale cress | nucleus | 64.2 | 64.39 |
| CDY37130 | Canola | nucleus | 63.31 | 63.13 |
| CDY22814 | Canola | nucleus | 61.83 | 62.02 |
| CDY37109 | Canola | nucleus | 60.65 | 61.56 |
| CDY29599 | Canola | nucleus | 56.51 | 58.77 |
| CDY65812 | Canola | nucleus | 48.82 | 58.72 |
| CDY37108 | Canola | nucleus, plastid | 57.99 | 57.14 |
| CDY22801 | Canola | nucleus | 58.28 | 56.61 |
| PGSC0003DMT400085602 | Potato | nucleus | 16.86 | 44.53 |
| KRG93082 | Soybean | nucleus | 42.01 | 44.51 |
| Solyc03g083110.1.1 | Tomato | nucleus | 41.72 | 42.09 |
| VIT_11s0037g00010.t01 | Wine grape | nucleus | 44.38 | 42.02 |
| CDY67348 | Canola | nucleus | 14.2 | 32.0 |
| PGSC0003DMT400092316 | Potato | nucleus | 12.43 | 31.58 |
| CDY40973 | Canola | nucleus | 29.29 | 31.43 |
| CDX97996 | Canola | nucleus | 29.59 | 30.77 |
| CDY61361 | Canola | nucleus | 29.59 | 30.58 |
| CDY24391 | Canola | nucleus | 30.47 | 30.47 |
| CDY72302 | Canola | nucleus | 29.29 | 30.37 |
| CDY58354 | Canola | nucleus | 28.99 | 30.06 |
| CDX81561 | Canola | nucleus | 30.47 | 30.03 |
| GSMUA_Achr11P... | Banana | nucleus | 29.59 | 29.76 |
| CDY36099 | Canola | nucleus | 30.47 | 29.43 |
| CDX99755 | Canola | nucleus | 29.59 | 29.41 |
| CDX84999 | Canola | nucleus | 30.77 | 29.38 |
| CDY45849 | Canola | nucleus, plastid | 30.18 | 29.14 |
| CDY16133 | Canola | nucleus | 30.77 | 29.05 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 35.21 | 28.74 |
| Solyc12g098460.1.1 | Tomato | nucleus | 17.46 | 28.23 |
| CDX83547 | Canola | nucleus | 24.56 | 25.62 |
| CDX73868 | Canola | nucleus | 17.16 | 24.58 |
| CDX84162 | Canola | nucleus | 17.46 | 24.28 |
| CDY43060 | Canola | cytosol | 11.54 | 23.93 |
| CDY43751 | Canola | nucleus | 17.16 | 23.87 |
| CDX75073 | Canola | nucleus | 17.46 | 23.79 |
| CDY62470 | Canola | nucleus | 15.98 | 23.68 |
| CDY08512 | Canola | nucleus | 17.16 | 23.39 |
| CDY01036 | Canola | nucleus | 16.86 | 22.18 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 18.34 | 21.75 |
| CDY47260 | Canola | nucleus | 16.57 | 20.97 |
| EES14747 | Sorghum | plastid | 16.86 | 20.43 |
| CDY69432 | Canola | nucleus | 16.27 | 19.78 |
| CDX80996 | Canola | nucleus | 15.98 | 19.64 |
| Os02t0455800-01 | Rice | nucleus | 15.38 | 19.48 |
| CDX67872 | Canola | nucleus | 16.27 | 19.3 |
| CDX76605 | Canola | nucleus | 16.57 | 19.18 |
| CDY11388 | Canola | nucleus | 16.57 | 19.18 |
| CDX80053 | Canola | nucleus | 16.57 | 18.86 |
| PGSC0003DMT400040900 | Potato | nucleus | 8.28 | 18.3 |
| CDY41564 | Canola | nucleus | 15.98 | 18.18 |
| CDY07140 | Canola | nucleus | 16.27 | 17.97 |
| KXG24821 | Sorghum | nucleus | 15.09 | 17.89 |
| CDY50908 | Canola | nucleus | 16.57 | 17.78 |
| CDY48008 | Canola | nucleus | 15.98 | 17.76 |
| CDX97251 | Canola | nucleus | 17.75 | 17.7 |
| CDX83351 | Canola | nucleus | 15.98 | 17.53 |
| CDY27515 | Canola | nucleus | 15.68 | 17.43 |
| CDY49614 | Canola | nucleus | 15.98 | 17.42 |
| CDY15208 | Canola | nucleus | 16.57 | 17.39 |
| CDY58763 | Canola | nucleus | 16.27 | 17.3 |
| Os02t0455900-00 | Rice | nucleus | 13.91 | 17.28 |
| CDY58764 | Canola | nucleus | 16.27 | 17.19 |
| CDX90001 | Canola | nucleus | 17.16 | 16.86 |
| CDY70080 | Canola | nucleus | 11.24 | 15.9 |
| CDX98911 | Canola | nucleus | 11.24 | 15.9 |
Protein Annotations
| MapMan:15.5.5.3 | MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | GO:A0A078GBS0 | UniProt:A0A078GBS0 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:B3_DNA-bd | EnsemblPlants:CDY22826 | ProteinID:CDY22826 | ProteinID:CDY22826.1 |
| InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00021173001 | InterPro:IPR001471 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:IPR036955 | PFAM:PF00847 |
| PFAM:PF02362 | PFscan:PS50863 | PFscan:PS51032 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF13 | SMART:SM00380 |
| SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54171 | UniParc:UPI0004EEEDF8 | SEG:seg | : |
Description
BnaA06g02510DBnaA06g02510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBS0]
Coordinates
chrLK032136:+:354273..355289
Molecular Weight (calculated)
38581.8 Da
IEP (calculated)
8.546
GRAVY (calculated)
-0.526
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSLNEAKTM TETSGSSNSV LCLANPMEQP HVSTTTRSVL SNTKYKGVVQ QPNGHWGAQI YSEHRRIWLG TFKSAAEAAA SYDSASIKLR GIDANSYRNF
101: PWCEITTHEP AFQANYTTEA VLNMIKDCSY QHKFMEYLRR RSQLVDFANI NIVAAASKQS RGGRGVQEPF SCTPLFSKEL TPSDVGKLNR LVIPKKHAVK
201: HLPFISDGQK EREEGEIGEA VDDVEVVFYD RAMRQWKFRY CYWRSSQSFV FTRGWNGFVR EKRLKEKDVI VFYHCDVPTN VMTLQGQNNS FLMIDVDYFT
301: DKGPVAPKEV DKMVHNTSEE EMKTETKGGF MLFGVRIQ
101: PWCEITTHEP AFQANYTTEA VLNMIKDCSY QHKFMEYLRR RSQLVDFANI NIVAAASKQS RGGRGVQEPF SCTPLFSKEL TPSDVGKLNR LVIPKKHAVK
201: HLPFISDGQK EREEGEIGEA VDDVEVVFYD RAMRQWKFRY CYWRSSQSFV FTRGWNGFVR EKRLKEKDVI VFYHCDVPTN VMTLQGQNNS FLMIDVDYFT
301: DKGPVAPKEV DKMVHNTSEE EMKTETKGGF MLFGVRIQ
001: MDEMSNVAKT TTETSGLTDS VLSLTKRMKP TEVTTTTKPA LSNTTKFKGV VQQQNGHWGA QIYADHRRIW LGTFKSAHEA AAAYDSASIK LRSFDANSHR
101: NFPWSDFTLH EPDFQECYTT EAVLNMIRDG SYQHKFRDFL RIRSQIVANI NIVGSKQVLG GGEGGQESNK CFSCTQLFQK ELTPSDVGKL NRLVIPKKYA
201: VKYMPFISDD QSEKETSEGV EDVEVVFYDR AMRQWKFRYC YWRSSQSFVF TRGWNGFVKE KNLKEKDIIV FYTCDVPNNV KTLEGQSKTF LMIDVHHFSG
301: NGFVVPEEVN KTVHEISDEE MKTETLFTSK VEEETKSEEK KGGFMLFGVR IQ
101: NFPWSDFTLH EPDFQECYTT EAVLNMIRDG SYQHKFRDFL RIRSQIVANI NIVGSKQVLG GGEGGQESNK CFSCTQLFQK ELTPSDVGKL NRLVIPKKYA
201: VKYMPFISDD QSEKETSEGV EDVEVVFYDR AMRQWKFRYC YWRSSQSFVF TRGWNGFVKE KNLKEKDIIV FYTCDVPNNV KTLEGQSKTF LMIDVHHFSG
301: NGFVVPEEVN KTVHEISDEE MKTETLFTSK VEEETKSEEK KGGFMLFGVR IQ
Arabidopsis Description
AP2/ERF and B3 domain-containing transcription factor At1g51120 [Source:UniProtKB/Swiss-Prot;Acc:Q9C688]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.