Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24821 | Sorghum | nucleus | 70.61 | 69.12 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 68.82 | 67.37 |
| OQU77426 | Sorghum | nucleus | 18.28 | 31.68 |
| EER92015 | Sorghum | nucleus | 25.45 | 25.91 |
| KXG19112 | Sorghum | nucleus | 19.0 | 25.85 |
| KXG27771 | Sorghum | nucleus | 24.73 | 25.18 |
| PGSC0003DMT400085602 | Potato | nucleus | 11.47 | 25.0 |
| PGSC0003DMT400092316 | Potato | nucleus | 11.47 | 24.06 |
| KXG19111 | Sorghum | nucleus | 20.43 | 23.95 |
| OQU93364 | Sorghum | nucleus | 27.6 | 23.33 |
| EES13386 | Sorghum | nucleus | 20.43 | 22.53 |
| KXG22988 | Sorghum | plastid | 24.73 | 21.56 |
| Os02t0455800-01 | Rice | nucleus | 20.07 | 20.97 |
| Os02t0455900-00 | Rice | nucleus | 19.71 | 20.22 |
| Solyc12g098460.1.1 | Tomato | nucleus | 15.05 | 20.1 |
| EES02511 | Sorghum | nucleus | 26.88 | 19.33 |
| Bra030458.1-P | Field mustard | nucleus | 21.15 | 18.67 |
| KXG22484 | Sorghum | nucleus, plastid | 26.88 | 18.38 |
| EES03472 | Sorghum | nucleus, plastid | 26.52 | 17.92 |
| Bra030476.1-P | Field mustard | nucleus | 20.43 | 17.54 |
| CDY29599 | Canola | nucleus | 20.43 | 17.54 |
| AT1G50680.1 | Thale cress | nucleus | 21.15 | 17.51 |
| CDY51249 | Canola | nucleus | 21.15 | 17.4 |
| Bra014282.1-P | Field mustard | nucleus | 21.15 | 17.4 |
| CDY46564 | Canola | nucleus | 21.15 | 17.4 |
| EES12712 | Sorghum | nucleus | 26.16 | 17.38 |
| KRG93082 | Soybean | nucleus | 19.71 | 17.24 |
| CDY29620 | Canola | nucleus | 21.15 | 17.15 |
| CDY35575 | Canola | nucleus | 21.15 | 17.1 |
| Bra018869.1-P | Field mustard | nucleus | 20.43 | 17.07 |
| CDY22826 | Canola | nucleus | 20.43 | 16.86 |
| CDY37130 | Canola | nucleus | 20.43 | 16.81 |
| EES07445 | Sorghum | nucleus | 25.81 | 16.59 |
| Bra018894.1-P | Field mustard | nucleus | 20.07 | 16.57 |
| VIT_11s0037g00010.t01 | Wine grape | nucleus | 21.15 | 16.53 |
| Bra018854.1-P | Field mustard | nucleus | 20.07 | 16.47 |
| CDY37108 | Canola | nucleus, plastid | 20.07 | 16.33 |
| CDY22814 | Canola | nucleus | 19.71 | 16.32 |
| CDY37109 | Canola | nucleus | 19.35 | 16.22 |
| AT1G51120.1 | Thale cress | nucleus | 20.43 | 16.19 |
| Solyc03g083110.1.1 | Tomato | nucleus | 19.0 | 15.82 |
| Bra018868.1-P | Field mustard | nucleus | 19.0 | 15.68 |
| CDY65812 | Canola | nucleus | 15.77 | 15.66 |
| CDY25209 | Canola | nucleus | 19.71 | 15.49 |
| CDY22801 | Canola | nucleus | 18.28 | 14.66 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 21.51 | 14.49 |
| GSMUA_Achr11P... | Banana | nucleus | 16.85 | 13.99 |
| PGSC0003DMT400040900 | Potato | nucleus | 6.45 | 11.76 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | InterPro:B3_DNA-bd | UniProt:C5YJ24 | InterPro:DNA-bd_pseudobarrel_sf | EnsemblPlants:EES14747 |
| ProteinID:EES14747 | ProteinID:EES14747.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 |
| InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF19 | SMART:SM01019 |
| EnsemblPlantsGene:SORBI_3007G083900 | SUPFAM:SSF101936 | UniParc:UPI0001A87EC8 | RefSeq:XP_002445252.1 | : | : |
Description
hypothetical protein
Coordinates
chr7:-:10123341..10124417
Molecular Weight (calculated)
31735.5 Da
IEP (calculated)
8.228
GRAVY (calculated)
-0.224
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFSATTISR EMEVQMGKVP PCLNPFQMVN PPLPSRYVSN WSSKPTLVFQ SSMSNGHGAL DLCEGRQRGR KVVDVEYLFS KILTASDVGK LNRLLIPRQC
101: AEECFPKISK TKSAEDDEDF LNFEDMSTGL IWCFRFCLWN NSKTYVLTKG WHFFIKEKNL KKGDVLSFYR GVGKTRSTDH MFIHIKPHTG TMSLPHHVPC
201: PIFSPSRLMI DDWDHENLGF STCHGIVPAS MPLSIGFGEL MPPTNLMPQQ TTFLESTSLE IVRVEKRLRL FGVDIHPFP
101: AEECFPKISK TKSAEDDEDF LNFEDMSTGL IWCFRFCLWN NSKTYVLTKG WHFFIKEKNL KKGDVLSFYR GVGKTRSTDH MFIHIKPHTG TMSLPHHVPC
201: PIFSPSRLMI DDWDHENLGF STCHGIVPAS MPLSIGFGEL MPPTNLMPQQ TTFLESTSLE IVRVEKRLRL FGVDIHPFP
001: MMTDLSLTRD EDEEEAKPLA EEEGAREVAD REHMFDKVVT PSDVGKLNRL VIPKQHAERF FPLDSSSNEK GLLLNFEDLT GKSWRFRYSY WNSSQSYVMT
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
Arabidopsis Description
NGA1B3 domain-containing transcription factor NGA1 [Source:UniProtKB/Swiss-Prot;Acc:O82799]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.