Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES14747 | Sorghum | plastid | 67.37 | 68.82 |
| KXG24821 | Sorghum | nucleus | 67.37 | 67.37 |
| Zm00001d035982_P001 | Maize | nucleus | 14.04 | 45.45 |
| Zm00001d048815_P001 | Maize | nucleus | 25.26 | 31.03 |
| Zm00001d010077_P001 | Maize | nucleus | 26.67 | 29.34 |
| Zm00001d024103_P001 | Maize | nucleus | 22.11 | 28.12 |
| Zm00001d035903_P001 | Maize | nucleus | 21.75 | 27.68 |
| Zm00001d029749_P001 | Maize | nucleus | 25.96 | 27.11 |
| Zm00001d047359_P001 | Maize | nucleus | 26.32 | 27.08 |
| PGSC0003DMT400085602 | Potato | nucleus | 11.58 | 25.78 |
| Zm00001d023446_P001 | Maize | nucleus | 25.26 | 25.44 |
| Zm00001d052591_P001 | Maize | nucleus | 25.96 | 24.1 |
| PGSC0003DMT400092316 | Potato | nucleus | 11.23 | 24.06 |
| Zm00001d027409_P001 | Maize | nucleus | 27.02 | 23.55 |
| Zm00001d024545_P001 | Maize | nucleus | 19.65 | 22.49 |
| Os02t0455800-01 | Rice | nucleus | 21.05 | 22.47 |
| Os02t0455900-00 | Rice | nucleus | 21.05 | 22.06 |
| Solyc12g098460.1.1 | Tomato | nucleus | 15.79 | 21.53 |
| Zm00001d039907_P001 | Maize | nucleus | 28.42 | 21.43 |
| Zm00001d043782_P001 | Maize | nucleus | 28.77 | 21.08 |
| Zm00001d038907_P001 | Maize | nucleus, plastid | 29.47 | 20.69 |
| Zm00001d009468_P001 | Maize | nucleus, plastid | 27.02 | 20.53 |
| Zm00001d011639_P001 | Maize | nucleus | 28.77 | 20.25 |
| Bra030458.1-P | Field mustard | nucleus | 22.11 | 19.94 |
| CDY29599 | Canola | nucleus | 22.46 | 19.69 |
| Bra030476.1-P | Field mustard | nucleus | 22.46 | 19.69 |
| Zm00001d026005_P001 | Maize | nucleus | 27.72 | 19.55 |
| Zm00001d002562_P001 | Maize | nucleus | 27.72 | 19.32 |
| Zm00001d017618_P001 | Maize | nucleus | 28.42 | 19.19 |
| AT1G50680.1 | Thale cress | nucleus | 22.46 | 18.99 |
| CDY51249 | Canola | nucleus | 22.46 | 18.88 |
| CDY46564 | Canola | nucleus | 22.46 | 18.88 |
| Bra014282.1-P | Field mustard | nucleus | 22.46 | 18.88 |
| Zm00001d051471_P001 | Maize | nucleus | 27.72 | 18.81 |
| KRG93082 | Soybean | nucleus | 20.7 | 18.5 |
| AT1G51120.1 | Thale cress | nucleus | 22.81 | 18.47 |
| CDY22826 | Canola | nucleus | 21.75 | 18.34 |
| Bra018894.1-P | Field mustard | nucleus | 21.75 | 18.34 |
| CDY29620 | Canola | nucleus | 22.11 | 18.31 |
| CDY35575 | Canola | nucleus | 22.11 | 18.26 |
| CDY37109 | Canola | nucleus | 21.05 | 18.02 |
| CDY37130 | Canola | nucleus | 21.4 | 17.99 |
| Bra018854.1-P | Field mustard | nucleus | 21.4 | 17.94 |
| CDY22814 | Canola | nucleus | 21.05 | 17.8 |
| Bra018868.1-P | Field mustard | nucleus | 21.05 | 17.75 |
| VIT_11s0037g00010.t01 | Wine grape | nucleus | 22.11 | 17.65 |
| CDY25209 | Canola | nucleus | 21.4 | 17.18 |
| CDY65812 | Canola | nucleus | 16.84 | 17.08 |
| Bra018869.1-P | Field mustard | nucleus | 19.65 | 16.77 |
| CDY37108 | Canola | nucleus, plastid | 20.0 | 16.62 |
| Solyc03g083110.1.1 | Tomato | nucleus | 18.95 | 16.12 |
| CDY22801 | Canola | nucleus | 19.65 | 16.09 |
| GSMUA_Achr11P... | Banana | nucleus | 17.89 | 15.18 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 21.75 | 14.98 |
| PGSC0003DMT400040900 | Potato | nucleus | 5.96 | 11.11 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | UniProt:A0A1D6IYX3 | ProteinID:AQK41070.1 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 |
| PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF19 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0008430CA4 |
| EnsemblPlantsGene:Zm00001d024354 | EnsemblPlants:Zm00001d024354_P001 | EnsemblPlants:Zm00001d024354_T001 | SEG:seg | : | : |
Description
ABI3-VP1-transcription factor 26AP2/ERF and B3 domain-containing transcription factor
Coordinates
chr10:-:66471477..66472334
Molecular Weight (calculated)
31819.4 Da
IEP (calculated)
8.634
GRAVY (calculated)
-0.225
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVQMGKAPP CLNPFLMVNP LLPPQHVSPW SSKSVPVFQF GMTNGHGALD LCEESKRARK VVHLEYLFSK VLTPSDVGKL NRLLIPRQCA EGFFPMISEV
101: KSGGDDIFLN FEDTSTGLVW RFRFCLWNNS KTYVLTKGWS VFIKEKNLKK GDILSFYRDA SKSIRTNHLF IHIKPHTGTM PLPHHVPSPV FSPSGMVIDD
201: QVHDSLNIGK SHGIAPSWKP LSFGSGELMP STNPTPQQTT FPESTSLANS IVMAEKHLRL FGVDIDIPTH RYGDESSDGF IKNIA
101: KSGGDDIFLN FEDTSTGLVW RFRFCLWNNS KTYVLTKGWS VFIKEKNLKK GDILSFYRDA SKSIRTNHLF IHIKPHTGTM PLPHHVPSPV FSPSGMVIDD
201: QVHDSLNIGK SHGIAPSWKP LSFGSGELMP STNPTPQQTT FPESTSLANS IVMAEKHLRL FGVDIDIPTH RYGDESSDGF IKNIA
001: MMTDLSLTRD EDEEEAKPLA EEEGAREVAD REHMFDKVVT PSDVGKLNRL VIPKQHAERF FPLDSSSNEK GLLLNFEDLT GKSWRFRYSY WNSSQSYVMT
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
Arabidopsis Description
NGA1B3 domain-containing transcription factor NGA1 [Source:UniProtKB/Swiss-Prot;Acc:O82799]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.