Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07445 | Sorghum | nucleus | 91.71 | 89.17 |
| Zm00001d051471_P001 | Maize | nucleus | 82.46 | 82.86 |
| Zm00001d035982_P001 | Maize | nucleus | 14.93 | 71.59 |
| Zm00001d002562_P001 | Maize | nucleus | 63.27 | 65.28 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 62.09 | 64.85 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 62.56 | 64.55 |
| Zm00001d026005_P001 | Maize | nucleus | 61.61 | 64.36 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 62.32 | 64.3 |
| Os04t0581400-01 | Rice | nucleus | 41.0 | 59.04 |
| Zm00001d048815_P001 | Maize | nucleus | 28.44 | 51.72 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 29.86 | 50.6 |
| Zm00001d029749_P001 | Maize | nucleus | 32.7 | 50.55 |
| Zm00001d047359_P001 | Maize | nucleus | 33.18 | 50.54 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 29.62 | 50.0 |
| Zm00001d010077_P001 | Maize | nucleus | 30.33 | 49.42 |
| Zm00001d027409_P001 | Maize | nucleus | 36.97 | 47.71 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 23.46 | 46.92 |
| Bra004501.1-P | Field mustard | nucleus | 32.94 | 46.8 |
| CDX80053 | Canola | nucleus | 32.94 | 46.8 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 36.49 | 46.67 |
| CDY41564 | Canola | nucleus | 32.46 | 46.13 |
| CDY67348 | Canola | nucleus | 16.11 | 45.33 |
| Bra040478.1-P | Field mustard | nucleus | 31.28 | 45.05 |
| CDY27515 | Canola | nucleus | 31.99 | 44.41 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 28.44 | 44.12 |
| CDY48008 | Canola | nucleus | 31.75 | 44.08 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 24.41 | 43.83 |
| Zm00001d035903_P001 | Maize | nucleus | 23.22 | 43.75 |
| Solyc08g013700.1.1 | Tomato | nucleus | 30.33 | 43.54 |
| CDY50908 | Canola | nucleus | 32.46 | 43.49 |
| AT2G46870.1 | Thale cress | nucleus | 31.75 | 43.23 |
| Zm00001d024103_P001 | Maize | nucleus | 22.51 | 42.41 |
| Bra000434.1-P | Field mustard | nucleus | 31.04 | 42.26 |
| PGSC0003DMT400015010 | Potato | nucleus | 29.86 | 42.0 |
| Solyc08g013690.1.1 | Tomato | nucleus | 32.23 | 41.98 |
| CDX83351 | Canola | nucleus | 30.57 | 41.88 |
| Bra003482.1-P | Field mustard | nucleus | 27.96 | 41.26 |
| PGSC0003DMT400015011 | Potato | nucleus | 30.57 | 41.21 |
| CDX67872 | Canola | nucleus | 27.73 | 41.05 |
| Solyc08g083400.2.1 | Tomato | nucleus | 32.46 | 41.02 |
| CDY69432 | Canola | nucleus | 27.01 | 41.01 |
| CDY43060 | Canola | cytosol | 15.64 | 40.49 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 29.15 | 40.46 |
| CDX76605 | Canola | nucleus | 27.96 | 40.41 |
| Bra007646.1-P | Field mustard | nucleus | 27.96 | 40.41 |
| CDY11388 | Canola | nucleus | 27.96 | 40.41 |
| AT3G61970.1 | Thale cress | nucleus | 28.2 | 39.8 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 26.3 | 38.81 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 26.07 | 38.19 |
| CDY58764 | Canola | nucleus | 28.91 | 38.12 |
| Bra014415.1-P | Field mustard | nucleus | 28.91 | 38.12 |
| CDY58763 | Canola | nucleus | 28.67 | 38.05 |
| CDX90001 | Canola | nucleus | 30.33 | 37.21 |
| CDY15208 | Canola | nucleus | 27.96 | 36.65 |
| Bra033294.1-P | Field mustard | nucleus | 29.86 | 36.63 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 29.15 | 36.5 |
| PGSC0003DMT400031863 | Potato | nucleus | 34.36 | 35.71 |
| KRG97268 | Soybean | nucleus | 34.83 | 35.59 |
| KRH68988 | Soybean | nucleus | 34.83 | 35.0 |
| AT1G01030.1 | Thale cress | nucleus | 29.62 | 34.92 |
| Bra030497.1-P | Field mustard | nucleus | 28.91 | 34.46 |
| Zm00001d023446_P001 | Maize | nucleus | 22.75 | 33.92 |
| Zm00001d024545_P001 | Maize | nucleus | 19.43 | 32.93 |
| KRH47753 | Soybean | nucleus | 38.86 | 32.8 |
| Zm00001d052591_P001 | Maize | nucleus | 22.99 | 31.6 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 33.41 | 30.92 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 32.7 | 29.93 |
| Zm00001d043782_P001 | Maize | nucleus | 27.01 | 29.31 |
| Zm00001d009468_P001 | Maize | nucleus, plastid | 25.59 | 28.8 |
| KRH06334 | Soybean | nucleus | 39.57 | 28.69 |
| Zm00001d038907_P001 | Maize | nucleus, plastid | 27.49 | 28.57 |
| AT4G01500.1 | Thale cress | nucleus | 22.51 | 28.53 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 19.19 | 28.42 |
| Zm00001d011639_P001 | Maize | nucleus | 27.25 | 28.4 |
| CDX97251 | Canola | nucleus | 22.27 | 27.73 |
| Bra008552.1-P | Field mustard | nucleus | 22.04 | 27.51 |
| CDY07140 | Canola | nucleus | 18.72 | 25.82 |
| Bra037417.1-P | Field mustard | nucleus | 18.72 | 25.48 |
| CDY49614 | Canola | nucleus | 18.72 | 25.48 |
| Zm00001d039907_P001 | Maize | nucleus | 22.75 | 25.4 |
Protein Annotations
| EntrezGene:100502511 | MapMan:15.5.5.3 | Gene3D:2.40.330.10 | ProteinID:AQK73569.1 | InterPro:B3_DNA-bd | EMBL:BT088401 |
| UniProt:C4JC54 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 |
| InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF39 | SMART:SM01019 |
| SUPFAM:SSF101936 | UniParc:UPI0001A4C0B1 | EnsemblPlantsGene:Zm00001d017618 | EnsemblPlants:Zm00001d017618_P001 | EnsemblPlants:Zm00001d017618_T001 | SEG:seg |
Description
ABI3-VP1-transcription factor 16B3 domain-containing transcription factor NGA2
Coordinates
chr5:-:201875376..201876644
Molecular Weight (calculated)
44972.2 Da
IEP (calculated)
7.929
GRAVY (calculated)
-0.483
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQFAASGRF SREEEADEEQ EDASNSMREI SFMPPAAASS SSAAASASAS ASTSASACAS GSSSAPFRSA SASGDAAGAS GSGGPADADA EAEAVEKEHM
101: FDKVVTPSDV GKLNRLVIPK QYAEKYFPLD AAANEKGLLL SFEDSAGKHW RFRYSYWNSS QSYVMTKGWS RFVKEKRLVA GDTVSFSRAA AEDARHRLFI
201: DWKRRVDTRG PLRFSGLALP MPLPSSHYGG PHHYSPWGFG GGGGGGGGFF MPPSPPATLY EHRLRQGLDF RSMTTTYPAP TVGRQLLFFG SARMPPHHAP
301: PPQPRPFSLP LHHYTVQPSA AGVTAASRPV LLDSVPVIES PTTAAKRVRL FGVNLDNNPD GGGEASHQGD ALSLQMPGWQ QRTPTLRLLE LPRHGGESSA
401: ASSPSSSSSS KREARSALDL DL
101: FDKVVTPSDV GKLNRLVIPK QYAEKYFPLD AAANEKGLLL SFEDSAGKHW RFRYSYWNSS QSYVMTKGWS RFVKEKRLVA GDTVSFSRAA AEDARHRLFI
201: DWKRRVDTRG PLRFSGLALP MPLPSSHYGG PHHYSPWGFG GGGGGGGGFF MPPSPPATLY EHRLRQGLDF RSMTTTYPAP TVGRQLLFFG SARMPPHHAP
301: PPQPRPFSLP LHHYTVQPSA AGVTAASRPV LLDSVPVIES PTTAAKRVRL FGVNLDNNPD GGGEASHQGD ALSLQMPGWQ QRTPTLRLLE LPRHGGESSA
401: ASSPSSSSSS KREARSALDL DL
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.