Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008552.1-P | Field mustard | nucleus | 99.41 | 99.7 |
| CDY67348 | Canola | nucleus | 34.51 | 78.0 |
| CDY07140 | Canola | nucleus | 64.9 | 71.9 |
| CDY49614 | Canola | nucleus | 65.19 | 71.29 |
| AT4G01500.1 | Thale cress | nucleus | 69.91 | 71.17 |
| CDY43060 | Canola | cytosol | 31.86 | 66.26 |
| Zm00001d035982_P001 | Maize | nucleus | 14.45 | 55.68 |
| Os06t0107800-02 | Rice | nucleus | 23.01 | 39.2 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 23.01 | 39.0 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 22.42 | 38.97 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 22.71 | 38.89 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 22.42 | 38.78 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 22.42 | 38.78 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 23.3 | 36.41 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 23.01 | 36.28 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 23.01 | 35.94 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 23.3 | 35.91 |
| Zm00001d048815_P001 | Maize | nucleus | 24.48 | 35.78 |
| KXG19112 | Sorghum | nucleus | 21.24 | 35.12 |
| Zm00001d010077_P001 | Maize | nucleus | 26.55 | 34.75 |
| CDY69432 | Canola | nucleus | 28.02 | 34.17 |
| EES13386 | Sorghum | nucleus | 25.37 | 33.99 |
| Zm00001d024545_P001 | Maize | nucleus | 24.78 | 33.73 |
| CDX67872 | Canola | nucleus | 28.32 | 33.68 |
| Zm00001d035903_P001 | Maize | nucleus | 22.12 | 33.48 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 27.14 | 33.45 |
| CDY43751 | Canola | nucleus | 23.89 | 33.33 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 24.48 | 33.33 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 24.48 | 33.2 |
| CDY08512 | Canola | nucleus | 24.19 | 33.06 |
| Zm00001d024103_P001 | Maize | nucleus | 21.83 | 33.04 |
| CDX80053 | Canola | nucleus | 28.91 | 33.0 |
| CDY62470 | Canola | nucleus | 22.12 | 32.89 |
| CDX76605 | Canola | nucleus | 28.32 | 32.88 |
| CDY11388 | Canola | nucleus | 28.32 | 32.88 |
| CDY41564 | Canola | nucleus | 28.61 | 32.66 |
| CDY27515 | Canola | nucleus | 29.2 | 32.57 |
| CDY48008 | Canola | nucleus | 29.2 | 32.57 |
| CDX84162 | Canola | nucleus | 23.3 | 32.51 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 26.55 | 32.37 |
| CDX75073 | Canola | nucleus | 23.6 | 32.26 |
| KXG19111 | Sorghum | nucleus | 22.42 | 31.93 |
| CDY01036 | Canola | nucleus | 24.19 | 31.91 |
| Zm00001d029749_P001 | Maize | nucleus | 25.66 | 31.87 |
| CDX83351 | Canola | nucleus | 28.91 | 31.82 |
| CDX73868 | Canola | nucleus | 22.12 | 31.78 |
| EER92015 | Sorghum | nucleus | 25.66 | 31.75 |
| CDY50908 | Canola | nucleus | 29.5 | 31.75 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 27.43 | 31.74 |
| CDY15208 | Canola | nucleus | 30.09 | 31.68 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 27.14 | 31.62 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 25.07 | 31.02 |
| Os03t0120900-01 | Rice | nucleus | 28.32 | 30.87 |
| Zm00001d047359_P001 | Maize | nucleus | 25.07 | 30.69 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 18.58 | 30.58 |
| CDX90001 | Canola | nucleus | 30.97 | 30.52 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 18.88 | 30.33 |
| CDY58763 | Canola | nucleus | 28.32 | 30.19 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 28.32 | 30.09 |
| CDY58764 | Canola | nucleus | 28.32 | 30.0 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 28.02 | 29.97 |
| OQU93364 | Sorghum | nucleus | 28.91 | 29.7 |
| Os04t0581400-01 | Rice | nucleus | 25.66 | 29.69 |
| CDY47260 | Canola | nucleus | 23.3 | 29.59 |
| Zm00001d027409_P001 | Maize | nucleus | 28.32 | 29.36 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 18.88 | 28.57 |
| Os08t0157700-00 | Rice | nucleus | 24.19 | 28.57 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 28.32 | 28.49 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.06 | 28.22 |
| Os10t0537100-00 | Rice | nucleus | 25.96 | 28.21 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 28.32 | 28.15 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 27.14 | 27.88 |
| CDX97996 | Canola | nucleus | 26.55 | 27.69 |
| CDY61361 | Canola | nucleus | 26.55 | 27.52 |
| CDY58354 | Canola | nucleus | 26.25 | 27.3 |
| CDX80996 | Canola | nucleus | 22.12 | 27.27 |
| CDY72302 | Canola | nucleus | 25.96 | 26.99 |
| CDX99755 | Canola | nucleus | 26.84 | 26.76 |
| CDY40973 | Canola | nucleus | 24.78 | 26.67 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 18.29 | 26.38 |
| CDX81561 | Canola | nucleus | 26.55 | 26.24 |
| CDY45849 | Canola | nucleus, plastid | 26.84 | 26.0 |
| CDY24391 | Canola | nucleus | 24.78 | 24.85 |
| CDY36099 | Canola | nucleus | 25.07 | 24.29 |
| CDX84999 | Canola | nucleus | 25.07 | 24.01 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 28.32 | 23.76 |
| Zm00001d026005_P001 | Maize | nucleus | 28.32 | 23.76 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 28.61 | 23.72 |
| Zm00001d002562_P001 | Maize | nucleus | 28.61 | 23.72 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 21.24 | 23.68 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 18.88 | 23.53 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 28.32 | 23.47 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 28.32 | 23.47 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 28.32 | 23.47 |
| CDY16133 | Canola | nucleus | 24.78 | 23.46 |
| Os02t0683500-01 | Rice | nucleus | 28.32 | 23.3 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 19.76 | 23.26 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 28.32 | 23.19 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 28.32 | 23.19 |
| EES12712 | Sorghum | nucleus | 28.61 | 23.1 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 19.47 | 23.08 |
| Zm00001d017618_P001 | Maize | nucleus | 27.73 | 22.27 |
| Zm00001d051471_P001 | Maize | nucleus | 27.14 | 21.9 |
| EES07445 | Sorghum | nucleus | 28.02 | 21.89 |
| CDX83547 | Canola | nucleus | 20.65 | 21.6 |
| CDX98911 | Canola | nucleus | 14.16 | 20.08 |
| CDY70080 | Canola | nucleus | 14.16 | 20.08 |
| CDY29599 | Canola | nucleus | 17.4 | 18.15 |
| CDY37109 | Canola | nucleus | 17.7 | 18.02 |
| CDY22814 | Canola | nucleus | 17.7 | 17.8 |
| CDY65812 | Canola | nucleus | 14.75 | 17.79 |
| CDY22826 | Canola | nucleus | 17.7 | 17.75 |
| CDY29620 | Canola | nucleus | 17.4 | 17.15 |
| CDY46564 | Canola | nucleus | 17.11 | 17.11 |
| CDY51249 | Canola | nucleus | 17.11 | 17.11 |
| CDY35575 | Canola | nucleus | 17.4 | 17.1 |
| CDY37130 | Canola | nucleus | 16.81 | 16.81 |
| CDY22801 | Canola | nucleus | 16.81 | 16.38 |
| CDY25209 | Canola | nucleus | 16.81 | 16.06 |
| CDY37108 | Canola | nucleus, plastid | 15.34 | 15.16 |
Protein Annotations
| EnsemblPlants:CDX97251 | EnsemblPlantsGene:GSBRNA2T00104268001 | Gene3D:2.40.330.10 | GO:A0A078E7R1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | InterPro:IPR003340 | InterPro:IPR015300 |
| PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | PFAM:PF02362 | PFscan:PS50863 | ProteinID:CDX97251 | ProteinID:CDX97251.1 |
| SEG:seg | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EDF76F | MapMan:15.5.5.3 | : |
Description
BnaA02g20420D
Coordinates
chrLK031898:+:196554..198097
Molecular Weight (calculated)
38555.6 Da
IEP (calculated)
8.359
GRAVY (calculated)
-0.909
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTRASTHQE PAENGASGSD NNNNNNFNSA MREPMFQKVL TPSDVGKLNR LVIPKQHAEN YFPLEDNQTG TLLDFQDKNG KMWRFRYSYW NSSQSYVMTK
101: GWSRFVKEKK LNNGDTVSFH RGYVPDDNEP EQRRNILFID WRNRPDTNLL HNINHHHYPI LGPPPYPTAS YYPVTEYSMP HYGRFPSLYH NQFLGYGYGP
201: YGKTVTGGRY YAGSPLDHHH RWNLGRSEPF FYDSCPVFPT TRLTSSLAML PSSPPSQPPQ EGTAKKLRLF GFDVEESSSS GEARAEMGVA GHSSSSPVVI
301: RDNESSWRSP RGEMGGLSSS VVNLSDDEDY KRKGKSLEF
101: GWSRFVKEKK LNNGDTVSFH RGYVPDDNEP EQRRNILFID WRNRPDTNLL HNINHHHYPI LGPPPYPTAS YYPVTEYSMP HYGRFPSLYH NQFLGYGYGP
201: YGKTVTGGRY YAGSPLDHHH RWNLGRSEPF FYDSCPVFPT TRLTSSLAML PSSPPSQPPQ EGTAKKLRLF GFDVEESSSS GEARAEMGVA GHSSSSPVVI
301: RDNESSWRSP RGEMGGLSSS VVNLSDDEDY KRKGKSLEF
001: MNISTMNLDQ ELAEIRASSS DHTNYFYSSE RREHMFDKVL TPSDVGKLNR LVIPKQHAEN FFPLEDNQNG TVLDFQDKNG KMWRFRYSYW NSSQSYVMTK
101: GWSRFVKEKK LFAGDTVSFY RGYIPDDNAQ PERRRKIMFI DWRPRAEINF VHNINNHNFV FGSPTYPTAR FYPVTPEYSM PYRSFPPFYQ NQFQEREYLG
201: YGYGRVVNGN GVRYYAGSPL DQHHQWNLGR SEPLVYDSVP VFPAGRVPPS APPQPSTTKK LRLFGVDVEE SSSSGDTRGE MGVAGYSSSS PVVIRDDDQS
301: FWRSPRGEMA SSSSAMQLSD DEEYKRKGKS LEL
101: GWSRFVKEKK LFAGDTVSFY RGYIPDDNAQ PERRRKIMFI DWRPRAEINF VHNINNHNFV FGSPTYPTAR FYPVTPEYSM PYRSFPPFYQ NQFQEREYLG
201: YGYGRVVNGN GVRYYAGSPL DQHHQWNLGR SEPLVYDSVP VFPAGRVPPS APPQPSTTKK LRLFGVDVEE SSSSGDTRGE MGVAGYSSSS PVVIRDDDQS
301: FWRSPRGEMA SSSSAMQLSD DEEYKRKGKS LEL
Arabidopsis Description
NGA4NGA4 [Source:UniProtKB/TrEMBL;Acc:A0A178V2Z9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.