Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67348 | Canola | nucleus | 69.94 | 76.0 |
| Zm00001d035982_P001 | Maize | nucleus | 23.31 | 43.18 |
| CDX97251 | Canola | nucleus | 66.26 | 31.86 |
| CDY07140 | Canola | nucleus | 57.06 | 30.39 |
| CDY49614 | Canola | nucleus | 57.06 | 30.0 |
| AT4G01500.1 | Thale cress | nucleus | 60.12 | 29.43 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 34.97 | 29.23 |
| Os06t0107800-02 | Rice | nucleus | 35.58 | 29.15 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 34.36 | 28.57 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 34.36 | 28.57 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 34.97 | 28.5 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 34.36 | 28.28 |
| Zm00001d048815_P001 | Maize | nucleus | 39.26 | 27.59 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 34.97 | 26.27 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 34.36 | 26.05 |
| Zm00001d010077_P001 | Maize | nucleus | 41.1 | 25.87 |
| KXG19112 | Sorghum | nucleus | 32.52 | 25.85 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 33.74 | 25.35 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 38.04 | 24.9 |
| CDY43751 | Canola | nucleus | 36.81 | 24.69 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 33.13 | 24.55 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 37.42 | 24.4 |
| CDX84162 | Canola | nucleus | 36.2 | 24.28 |
| Zm00001d029749_P001 | Maize | nucleus | 40.49 | 24.18 |
| CDY62470 | Canola | nucleus | 33.74 | 24.12 |
| Zm00001d024103_P001 | Maize | nucleus | 33.13 | 24.11 |
| CDY69432 | Canola | nucleus | 41.1 | 24.1 |
| EER92015 | Sorghum | nucleus | 40.49 | 24.09 |
| Zm00001d047359_P001 | Maize | nucleus | 40.49 | 23.83 |
| CDX75073 | Canola | nucleus | 36.2 | 23.79 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 30.06 | 23.79 |
| Zm00001d035903_P001 | Maize | nucleus | 32.52 | 23.66 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 39.88 | 23.64 |
| CDX76605 | Canola | nucleus | 42.33 | 23.63 |
| CDY11388 | Canola | nucleus | 42.33 | 23.63 |
| CDY41564 | Canola | nucleus | 42.94 | 23.57 |
| CDX67872 | Canola | nucleus | 41.1 | 23.51 |
| CDX80053 | Canola | nucleus | 42.33 | 23.23 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 30.06 | 23.22 |
| KXG19111 | Sorghum | nucleus | 33.74 | 23.11 |
| CDY27515 | Canola | nucleus | 42.94 | 23.03 |
| CDY48008 | Canola | nucleus | 42.94 | 23.03 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 39.26 | 23.02 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 38.65 | 22.99 |
| CDY08512 | Canola | nucleus | 34.97 | 22.98 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 33.13 | 22.98 |
| CDX73868 | Canola | nucleus | 33.13 | 22.88 |
| CDX83351 | Canola | nucleus | 42.94 | 22.73 |
| CDY50908 | Canola | nucleus | 43.56 | 22.54 |
| Os03t0120900-01 | Rice | nucleus | 42.94 | 22.51 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 39.88 | 22.34 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 30.67 | 22.32 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 39.88 | 22.18 |
| Os04t0581400-01 | Rice | nucleus | 39.88 | 22.18 |
| CDY01036 | Canola | nucleus | 34.97 | 22.18 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.52 | 21.99 |
| CDY15208 | Canola | nucleus | 42.94 | 21.74 |
| EES13386 | Sorghum | nucleus | 33.74 | 21.74 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 42.33 | 21.63 |
| OQU93364 | Sorghum | nucleus | 43.56 | 21.52 |
| Os10t0537100-00 | Rice | nucleus | 41.1 | 21.47 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 41.72 | 21.45 |
| CDY58763 | Canola | nucleus | 41.72 | 21.38 |
| CDY47260 | Canola | nucleus | 34.97 | 21.35 |
| Zm00001d024545_P001 | Maize | nucleus | 32.52 | 21.29 |
| CDY58764 | Canola | nucleus | 41.72 | 21.25 |
| Zm00001d027409_P001 | Maize | nucleus | 41.72 | 20.8 |
| CDX80996 | Canola | nucleus | 34.97 | 20.73 |
| CDX90001 | Canola | nucleus | 42.94 | 20.35 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 41.1 | 20.3 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 42.33 | 20.23 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 34.36 | 19.58 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 32.52 | 19.49 |
| Os08t0157700-00 | Rice | nucleus | 33.74 | 19.16 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 33.13 | 18.75 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 34.97 | 18.75 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 38.65 | 18.69 |
| CDX97996 | Canola | nucleus | 34.36 | 17.23 |
| CDY58354 | Canola | nucleus | 34.36 | 17.18 |
| CDY72302 | Canola | nucleus | 34.36 | 17.18 |
| CDY61361 | Canola | nucleus | 34.36 | 17.13 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 42.33 | 17.08 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 42.33 | 16.87 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 42.33 | 16.87 |
| Zm00001d026005_P001 | Maize | nucleus | 41.72 | 16.83 |
| Os02t0683500-01 | Rice | nucleus | 42.33 | 16.75 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 41.72 | 16.63 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 41.72 | 16.63 |
| Zm00001d002562_P001 | Maize | nucleus | 41.72 | 16.63 |
| CDX81561 | Canola | nucleus | 34.97 | 16.62 |
| CDY45849 | Canola | nucleus, plastid | 35.58 | 16.57 |
| CDY40973 | Canola | nucleus | 31.9 | 16.51 |
| EES12712 | Sorghum | nucleus | 42.33 | 16.43 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 41.72 | 16.43 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 41.72 | 16.43 |
| CDY36099 | Canola | nucleus | 34.97 | 16.29 |
| CDY24391 | Canola | nucleus | 33.74 | 16.27 |
| Zm00001d051471_P001 | Maize | nucleus | 41.1 | 15.95 |
| Zm00001d017618_P001 | Maize | nucleus | 40.49 | 15.64 |
| CDX84999 | Canola | nucleus | 33.74 | 15.54 |
| CDX99755 | Canola | nucleus | 31.9 | 15.29 |
| EES07445 | Sorghum | nucleus | 40.49 | 15.21 |
| CDY16133 | Canola | nucleus | 33.13 | 15.08 |
| CDX98911 | Canola | nucleus | 22.09 | 15.06 |
| CDY70080 | Canola | nucleus | 22.09 | 15.06 |
| CDY29599 | Canola | nucleus | 25.15 | 12.62 |
| CDY65812 | Canola | nucleus | 20.86 | 12.1 |
| CDY37109 | Canola | nucleus | 24.54 | 12.01 |
| CDY29620 | Canola | nucleus | 25.15 | 11.92 |
| CDY35575 | Canola | nucleus | 25.15 | 11.88 |
| CDY22814 | Canola | nucleus | 24.54 | 11.87 |
| CDY22826 | Canola | nucleus | 23.93 | 11.54 |
| CDY46564 | Canola | nucleus | 23.93 | 11.5 |
| CDY51249 | Canola | nucleus | 23.93 | 11.5 |
| CDY22801 | Canola | nucleus | 24.54 | 11.49 |
| CDY37130 | Canola | nucleus | 23.31 | 11.21 |
| CDY25209 | Canola | nucleus | 23.93 | 10.99 |
| CDX83547 | Canola | nucleus | 20.86 | 10.49 |
| CDY37108 | Canola | nucleus, plastid | 21.47 | 10.2 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | GO:A0A078HX73 | UniProt:A0A078HX73 | InterPro:B3_DNA-bd | EnsemblPlants:CDY43060 |
| ProteinID:CDY43060 | ProteinID:CDY43060.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00075893001 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 |
| SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EE0EEA | : | : | : |
Description
BnaA03g12070DBnaA03g12070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HX73]
Coordinates
chrLK032543:-:252539..253060
Molecular Weight (calculated)
19260.0 Da
IEP (calculated)
8.622
GRAVY (calculated)
-0.521
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MFDKVLTQSD FGKLNRLVIP KQHAENYFPL EDNQTGTVLD FEDRTGKISQ SYVMTKGWCR FVKEMKLESG DIVSFHRGYV PDDNEPEKRK NIFFIDWRPR
101: ANTSLVHNIN YHHYPLLGSI IVPALEYELK NYKYSLYINL SKFKHTIFSQ THMFCNTHAS PYI
101: ANTSLVHNIN YHHYPLLGSI IVPALEYELK NYKYSLYINL SKFKHTIFSQ THMFCNTHAS PYI
001: MNISTMNLDQ ELAEIRASSS DHTNYFYSSE RREHMFDKVL TPSDVGKLNR LVIPKQHAEN FFPLEDNQNG TVLDFQDKNG KMWRFRYSYW NSSQSYVMTK
101: GWSRFVKEKK LFAGDTVSFY RGYIPDDNAQ PERRRKIMFI DWRPRAEINF VHNINNHNFV FGSPTYPTAR FYPVTPEYSM PYRSFPPFYQ NQFQEREYLG
201: YGYGRVVNGN GVRYYAGSPL DQHHQWNLGR SEPLVYDSVP VFPAGRVPPS APPQPSTTKK LRLFGVDVEE SSSSGDTRGE MGVAGYSSSS PVVIRDDDQS
301: FWRSPRGEMA SSSSAMQLSD DEEYKRKGKS LEL
101: GWSRFVKEKK LFAGDTVSFY RGYIPDDNAQ PERRRKIMFI DWRPRAEINF VHNINNHNFV FGSPTYPTAR FYPVTPEYSM PYRSFPPFYQ NQFQEREYLG
201: YGYGRVVNGN GVRYYAGSPL DQHHQWNLGR SEPLVYDSVP VFPAGRVPPS APPQPSTTKK LRLFGVDVEE SSSSGDTRGE MGVAGYSSSS PVVIRDDDQS
301: FWRSPRGEMA SSSSAMQLSD DEEYKRKGKS LEL
Arabidopsis Description
NGA4NGA4 [Source:UniProtKB/TrEMBL;Acc:A0A178V2Z9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.