Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37109 | Canola | nucleus | 76.26 | 77.18 |
| Bra018868.1-P | Field mustard | nucleus | 76.56 | 76.33 |
| CDY37108 | Canola | nucleus, plastid | 76.85 | 75.51 |
| CDY37130 | Canola | nucleus | 74.78 | 74.34 |
| CDY22801 | Canola | nucleus | 70.33 | 68.1 |
| AT1G50680.1 | Thale cress | nucleus | 66.17 | 66.17 |
| AT1G51120.1 | Thale cress | nucleus | 68.55 | 65.62 |
| CDY29620 | Canola | nucleus | 65.88 | 64.53 |
| CDY35575 | Canola | nucleus | 65.58 | 64.06 |
| CDY46564 | Canola | nucleus | 63.8 | 63.42 |
| CDY51249 | Canola | nucleus | 63.5 | 63.13 |
| CDY29599 | Canola | nucleus | 59.94 | 62.15 |
| CDY22826 | Canola | nucleus | 62.02 | 61.83 |
| CDY65812 | Canola | nucleus | 50.74 | 60.85 |
| CDY25209 | Canola | nucleus | 61.72 | 58.59 |
| KRG93082 | Soybean | nucleus | 45.4 | 47.96 |
| PGSC0003DMT400085602 | Potato | nucleus | 16.62 | 43.75 |
| VIT_11s0037g00010.t01 | Wine grape | nucleus | 44.81 | 42.3 |
| Solyc03g083110.1.1 | Tomato | nucleus | 40.95 | 41.19 |
| CDY67348 | Canola | nucleus | 13.95 | 31.33 |
| CDY40973 | Canola | nucleus | 29.08 | 31.11 |
| PGSC0003DMT400092316 | Potato | nucleus | 12.17 | 30.83 |
| CDY72302 | Canola | nucleus | 29.67 | 30.67 |
| CDY58354 | Canola | nucleus | 29.08 | 30.06 |
| GSMUA_Achr11P... | Banana | nucleus | 29.97 | 30.06 |
| CDX81561 | Canola | nucleus | 30.56 | 30.03 |
| CDY24391 | Canola | nucleus | 29.97 | 29.88 |
| CDY16133 | Canola | nucleus | 31.45 | 29.61 |
| CDX97996 | Canola | nucleus | 28.49 | 29.54 |
| CDY45849 | Canola | nucleus, plastid | 30.56 | 29.43 |
| CDX84999 | Canola | nucleus | 30.86 | 29.38 |
| CDY61361 | Canola | nucleus | 28.49 | 29.36 |
| CDY36099 | Canola | nucleus | 30.27 | 29.14 |
| CDX99755 | Canola | nucleus | 29.08 | 28.82 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 35.31 | 28.74 |
| Solyc12g098460.1.1 | Tomato | nucleus | 17.51 | 28.23 |
| CDX83547 | Canola | nucleus | 24.63 | 25.62 |
| CDX84162 | Canola | nucleus | 18.4 | 25.51 |
| CDY43751 | Canola | nucleus | 18.1 | 25.1 |
| CDX75073 | Canola | nucleus | 18.4 | 25.0 |
| CDY43060 | Canola | cytosol | 11.87 | 24.54 |
| CDX73868 | Canola | nucleus | 16.91 | 24.15 |
| CDY08512 | Canola | nucleus | 17.51 | 23.79 |
| CDY62470 | Canola | nucleus | 15.73 | 23.25 |
| CDY01036 | Canola | nucleus | 17.51 | 22.96 |
| CDY47260 | Canola | nucleus | 17.21 | 21.72 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 17.8 | 21.05 |
| CDY69432 | Canola | nucleus | 17.21 | 20.86 |
| CDX67872 | Canola | nucleus | 17.21 | 20.35 |
| CDX80996 | Canola | nucleus | 16.32 | 20.0 |
| CDY11388 | Canola | nucleus | 17.21 | 19.86 |
| CDX76605 | Canola | nucleus | 17.21 | 19.86 |
| EES14747 | Sorghum | plastid | 16.32 | 19.71 |
| PGSC0003DMT400040900 | Potato | nucleus | 8.9 | 19.61 |
| CDX80053 | Canola | nucleus | 17.21 | 19.53 |
| CDY41564 | Canola | nucleus | 16.91 | 19.19 |
| CDY07140 | Canola | nucleus | 17.21 | 18.95 |
| CDY15208 | Canola | nucleus | 18.1 | 18.94 |
| CDY48008 | Canola | nucleus | 16.91 | 18.75 |
| Os02t0455800-01 | Rice | nucleus | 14.84 | 18.73 |
| CDY58763 | Canola | nucleus | 17.51 | 18.55 |
| CDY58764 | Canola | nucleus | 17.51 | 18.44 |
| CDY27515 | Canola | nucleus | 16.62 | 18.42 |
| CDY49614 | Canola | nucleus | 16.91 | 18.39 |
| CDX90001 | Canola | nucleus | 18.69 | 18.31 |
| CDX83351 | Canola | nucleus | 16.62 | 18.18 |
| CDY50908 | Canola | nucleus | 16.91 | 18.1 |
| CDX97251 | Canola | nucleus | 17.8 | 17.7 |
| KXG24821 | Sorghum | nucleus | 14.84 | 17.54 |
| Os02t0455900-00 | Rice | nucleus | 13.35 | 16.54 |
| CDY70080 | Canola | nucleus | 11.57 | 16.32 |
| CDX98911 | Canola | nucleus | 11.57 | 16.32 |
Protein Annotations
| MapMan:15.5.5.3 | MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | GO:A0A078GBU4 | UniProt:A0A078GBU4 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:B3_DNA-bd | EnsemblPlants:CDY22814 | ProteinID:CDY22814 | ProteinID:CDY22814.1 |
| InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00021160001 | InterPro:IPR001471 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:IPR036955 | PFAM:PF02362 |
| PRINTS:PR00367 | PFscan:PS50863 | PFscan:PS51032 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF13 | SMART:SM00380 |
| SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54171 | UniParc:UPI0004EEC3C1 | SEG:seg | : |
Description
BnaA06g02630DBnaA06g02630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBU4]
Coordinates
chrLK032136:-:229574..232804
Molecular Weight (calculated)
38598.7 Da
IEP (calculated)
8.631
GRAVY (calculated)
-0.621
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIAKSKASN TSDSYLPPKK RMRLSEPPTD KAPVSTAIKR VSFSDGTKYK GVVPQPNGRW GAQIYVDHKR IWLGTFSSAA EAAMAFDSAN IKLRSFDTNS
101: ERNFPWSDLT VQEPVFQNGY TTEAVLNMIK DGSYQREFID FLKTRSQVVI GGRYNMVGPK EDQESKKGFS CTELFRKELT PSDVGKLNRL VIPKKYAVRY
201: LPLLRDDQKE REEGEIVEDV EVVFYDRAMR PWKFRYCYWR SSQSFVFTRG WNGFVKEKSL KEKDAIVFYT CDVPTLEGQR KKFLMIDVHC SSDEGYAVCD
301: EEVNETVHNS SEGGVKTEET KSVENKGGFM LFGVRIQ
101: ERNFPWSDLT VQEPVFQNGY TTEAVLNMIK DGSYQREFID FLKTRSQVVI GGRYNMVGPK EDQESKKGFS CTELFRKELT PSDVGKLNRL VIPKKYAVRY
201: LPLLRDDQKE REEGEIVEDV EVVFYDRAMR PWKFRYCYWR SSQSFVFTRG WNGFVKEKSL KEKDAIVFYT CDVPTLEGQR KKFLMIDVHC SSDEGYAVCD
301: EEVNETVHNS SEGGVKTEET KSVENKGGFM LFGVRIQ
001: MRLDDEPENA LVVSSSPKTV VASGNVKYKG VVQQQNGHWG AQIYADHKRI WLGTFKSADE AATAYDSASI KLRSFDANSH RNFPWSTITL NEPDFQNCYT
101: TETVLNMIRD GSYQHKFRDF LRIRSQIVAS INIGGPKQAR GEVNQESDKC FSCTQLFQKE LTPSDVGKLN RLVIPKKYAV KYMPFISADQ SEKEEGEIVG
201: SVEDVEVVFY DRAMRQWKFR YCYWKSSQSF VFTRGWNSFV KEKNLKEKDV IAFYTCDVPN NVKTLEGQRK NFLMIDVHCF SDNGSVVAEE VSMTVHDSSV
301: QVKKTENLVS SMLEDKETKS EENKGGFMLF GVRIECP
101: TETVLNMIRD GSYQHKFRDF LRIRSQIVAS INIGGPKQAR GEVNQESDKC FSCTQLFQKE LTPSDVGKLN RLVIPKKYAV KYMPFISADQ SEKEEGEIVG
201: SVEDVEVVFY DRAMRQWKFR YCYWKSSQSF VFTRGWNSFV KEKNLKEKDV IAFYTCDVPN NVKTLEGQRK NFLMIDVHCF SDNGSVVAEE VSMTVHDSSV
301: QVKKTENLVS SMLEDKETKS EENKGGFMLF GVRIECP
Arabidopsis Description
AP2/ERF and B3 domain-containing transcription factor At1g50680 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6P5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.