Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22826 | Canola | nucleus | 91.83 | 96.45 |
| CDY29620 | Canola | nucleus | 71.27 | 73.55 |
| CDY35575 | Canola | nucleus | 71.27 | 73.33 |
| CDY51249 | Canola | nucleus | 69.86 | 73.16 |
| CDY46564 | Canola | nucleus | 69.86 | 73.16 |
| AT1G51120.1 | Thale cress | nucleus | 68.73 | 69.32 |
| AT1G50680.1 | Thale cress | nucleus | 61.13 | 64.39 |
| CDY37130 | Canola | nucleus | 60.28 | 63.13 |
| CDY37109 | Canola | nucleus | 58.87 | 62.76 |
| CDY22814 | Canola | nucleus | 58.59 | 61.72 |
| CDY29599 | Canola | nucleus | 53.52 | 58.46 |
| CDY65812 | Canola | nucleus | 45.92 | 58.01 |
| CDY37108 | Canola | nucleus, plastid | 55.21 | 57.14 |
| CDY22801 | Canola | nucleus | 55.77 | 56.9 |
| KRG93082 | Soybean | nucleus | 40.56 | 45.14 |
| PGSC0003DMT400085602 | Potato | nucleus | 16.06 | 44.53 |
| VIT_11s0037g00010.t01 | Wine grape | nucleus | 43.1 | 42.86 |
| Solyc03g083110.1.1 | Tomato | nucleus | 39.72 | 42.09 |
| PGSC0003DMT400092316 | Potato | nucleus | 11.83 | 31.58 |
| CDY67348 | Canola | nucleus | 13.24 | 31.33 |
| CDY40973 | Canola | nucleus | 27.61 | 31.11 |
| CDY24391 | Canola | nucleus | 29.01 | 30.47 |
| CDX97996 | Canola | nucleus | 27.89 | 30.46 |
| CDY72302 | Canola | nucleus | 27.89 | 30.37 |
| GSMUA_Achr11P... | Banana | nucleus | 28.73 | 30.36 |
| CDY61361 | Canola | nucleus | 27.89 | 30.28 |
| CDY58354 | Canola | nucleus | 27.61 | 30.06 |
| CDX81561 | Canola | nucleus | 29.01 | 30.03 |
| CDY36099 | Canola | nucleus | 29.01 | 29.43 |
| CDX84999 | Canola | nucleus | 29.3 | 29.38 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 34.08 | 29.23 |
| CDY45849 | Canola | nucleus, plastid | 28.73 | 29.14 |
| CDY16133 | Canola | nucleus | 29.3 | 29.05 |
| CDX99755 | Canola | nucleus | 27.61 | 28.82 |
| Solyc12g098460.1.1 | Tomato | nucleus | 16.9 | 28.71 |
| CDX83547 | Canola | nucleus | 23.38 | 25.62 |
| CDX73868 | Canola | nucleus | 16.06 | 24.15 |
| CDY43060 | Canola | cytosol | 10.99 | 23.93 |
| CDX84162 | Canola | nucleus | 16.34 | 23.87 |
| CDY43751 | Canola | nucleus | 16.34 | 23.87 |
| CDX75073 | Canola | nucleus | 16.34 | 23.39 |
| CDY62470 | Canola | nucleus | 14.93 | 23.25 |
| CDY08512 | Canola | nucleus | 16.06 | 22.98 |
| CDY01036 | Canola | nucleus | 15.77 | 21.79 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 17.18 | 21.4 |
| CDY47260 | Canola | nucleus | 15.49 | 20.6 |
| EES14747 | Sorghum | plastid | 15.49 | 19.71 |
| CDY69432 | Canola | nucleus | 15.21 | 19.42 |
| CDX80996 | Canola | nucleus | 14.93 | 19.27 |
| Os02t0455800-01 | Rice | nucleus | 14.37 | 19.1 |
| CDX67872 | Canola | nucleus | 15.21 | 18.95 |
| CDX80053 | Canola | nucleus | 15.77 | 18.86 |
| CDY11388 | Canola | nucleus | 15.49 | 18.84 |
| CDX76605 | Canola | nucleus | 15.49 | 18.84 |
| CDY41564 | Canola | nucleus | 15.49 | 18.52 |
| PGSC0003DMT400040900 | Potato | nucleus | 7.89 | 18.3 |
| CDY07140 | Canola | nucleus | 15.49 | 17.97 |
| CDY50908 | Canola | nucleus | 15.77 | 17.78 |
| CDY48008 | Canola | nucleus | 15.21 | 17.76 |
| CDX83351 | Canola | nucleus | 15.21 | 17.53 |
| CDY27515 | Canola | nucleus | 14.93 | 17.43 |
| CDY49614 | Canola | nucleus | 15.21 | 17.42 |
| Os02t0455900-00 | Rice | nucleus | 13.24 | 17.28 |
| CDY15208 | Canola | nucleus | 15.49 | 17.08 |
| CDY58763 | Canola | nucleus | 15.21 | 16.98 |
| CDY58764 | Canola | nucleus | 15.21 | 16.88 |
| KXG24821 | Sorghum | nucleus | 13.52 | 16.84 |
| CDX97251 | Canola | nucleus | 16.06 | 16.81 |
| CDX90001 | Canola | nucleus | 16.06 | 16.57 |
| CDY70080 | Canola | nucleus | 10.42 | 15.48 |
| CDX98911 | Canola | nucleus | 10.42 | 15.48 |
Protein Annotations
| MapMan:15.5.5.3 | MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | GO:A0A078GIV9 | UniProt:A0A078GIV9 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:B3_DNA-bd | EnsemblPlants:CDY25209 | ProteinID:CDY25209 | ProteinID:CDY25209.1 |
| InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00029169001 | InterPro:IPR001471 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:IPR036955 | PFAM:PF02362 |
| PFscan:PS50863 | PFscan:PS51032 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF13 | SMART:SM00380 | SMART:SM01019 |
| SUPFAM:SSF101936 | SUPFAM:SSF54171 | UniParc:UPI0004EE6FB0 | SEG:seg | : | : |
Description
BnaC06g04340DBnaC06g04340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIV9]
Coordinates
chrLK032170:+:419897..421804
Molecular Weight (calculated)
40243.8 Da
IEP (calculated)
8.625
GRAVY (calculated)
-0.455
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MITLSSCISE RLAANGGMNS LNEAKTMTET SGSSNSVLCL ANPMEQPHVP TTTRSVLSDT KYKGVVQQPN GHWGAQIYAE HRRIWLGTFK SAAEAAASYD
101: SASIKLRGID ANSYRNFPWC EITTHEPAFQ ANYTTEAVLN MIKDCSYQHK FMEYLRRRSQ MVDFANINIV AAASKQSRAG RGVQDPFSCT PLFSKELTPS
201: DVGKLNRLVI PKKHAVKHLP FISDVQKERE EGEIGGALDD VEVVFYDRAM RQWKFRYCYW RSSQSFVFTR GWNGFVREKR LKEKDVIVFY HCDVPTNVKT
301: LQGQSNSFLM IDVDYFTDKG SVAPKEVDKM VHNTSEEEMK TETKGGFMLF GVRIQ
101: SASIKLRGID ANSYRNFPWC EITTHEPAFQ ANYTTEAVLN MIKDCSYQHK FMEYLRRRSQ MVDFANINIV AAASKQSRAG RGVQDPFSCT PLFSKELTPS
201: DVGKLNRLVI PKKHAVKHLP FISDVQKERE EGEIGGALDD VEVVFYDRAM RQWKFRYCYW RSSQSFVFTR GWNGFVREKR LKEKDVIVFY HCDVPTNVKT
301: LQGQSNSFLM IDVDYFTDKG SVAPKEVDKM VHNTSEEEMK TETKGGFMLF GVRIQ
001: MESSSVDEST TSTGSICETP AITPAKKSSV GNLYRMGSGS SVVLDSENGV EAESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS
Arabidopsis Description
RAV1AP2/ERF and B3 domain-containing transcription factor RAV1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.