Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72302 | Canola | nucleus | 98.16 | 98.16 |
| Bra026917.1-P | Field mustard | nucleus | 97.85 | 93.82 |
| CDX97996 | Canola | nucleus | 90.49 | 90.77 |
| CDY61361 | Canola | nucleus | 89.88 | 89.6 |
| AT1G13260.1 | Thale cress | nucleus | 89.26 | 84.59 |
| CDY40973 | Canola | nucleus | 68.71 | 71.11 |
| CDX99755 | Canola | nucleus | 70.25 | 67.35 |
| CDX83547 | Canola | nucleus | 66.26 | 66.67 |
| CDY24391 | Canola | nucleus | 64.72 | 62.43 |
| CDX84999 | Canola | nucleus | 66.26 | 61.02 |
| CDX81561 | Canola | nucleus | 64.11 | 60.93 |
| CDY45849 | Canola | nucleus, plastid | 63.8 | 59.43 |
| CDY16133 | Canola | nucleus | 65.03 | 59.22 |
| CDY36099 | Canola | nucleus | 63.5 | 59.14 |
| GSMUA_Achr5P09950_001 | Banana | nucleus | 57.06 | 57.76 |
| KRH34761 | Soybean | nucleus | 61.04 | 56.7 |
| GSMUA_Achr1P05400_001 | Banana | nucleus | 51.23 | 56.04 |
| GSMUA_Achr4P03670_001 | Banana | nucleus | 50.31 | 55.78 |
| VIT_01s0011g03070.t01 | Wine grape | nucleus | 64.11 | 55.29 |
| KRG92025 | Soybean | nucleus | 61.35 | 55.25 |
| KRH75484 | Soybean | nucleus | 64.11 | 54.43 |
| PGSC0003DMT400002125 | Potato | nucleus | 65.95 | 54.02 |
| Solyc05g009790.1.1 | Tomato | nucleus | 65.34 | 53.92 |
| GSMUA_Achr3P29380_001 | Banana | nucleus | 43.25 | 53.61 |
| KRH70603 | Soybean | nucleus | 64.72 | 52.62 |
| GSMUA_Achr10P... | Banana | nucleus | 46.93 | 52.4 |
| GSMUA_Achr2P22560_001 | Banana | nucleus | 49.39 | 51.94 |
| GSMUA_Achr6P09880_001 | Banana | nucleus | 44.48 | 50.17 |
| TraesCS3D01G260100.1 | Wheat | nucleus | 57.06 | 49.73 |
| TraesCS3B01G293000.1 | Wheat | nucleus | 57.67 | 49.09 |
| TraesCS3A01G259900.1 | Wheat | nucleus | 56.13 | 48.8 |
| Os05t0549800-01 | Rice | nucleus | 51.23 | 48.69 |
| HORVU4Hr1G074300.4 | Barley | nucleus | 22.39 | 48.67 |
| Zm00001d043782_P001 | Maize | nucleus | 57.98 | 48.59 |
| Zm00001d009468_P001 | Maize | nucleus, plastid | 55.83 | 48.53 |
| Os01t0693400-01 | Rice | nucleus | 58.28 | 48.35 |
| GSMUA_Achr4P06710_001 | Banana | nucleus | 51.84 | 48.29 |
| GSMUA_Achr9P21470_001 | Banana | nucleus | 45.71 | 48.06 |
| HORVU3Hr1G064590.1 | Barley | nucleus | 28.22 | 47.42 |
| HORVU3Hr1G064640.4 | Barley | nucleus | 55.21 | 47.37 |
| TraesCS1D01G378900.1 | Wheat | nucleus | 56.44 | 46.94 |
| TraesCS1B01G392300.1 | Wheat | nucleus | 56.13 | 46.8 |
| TraesCS1A01G372300.1 | Wheat | nucleus | 56.13 | 46.68 |
| KXG22484 | Sorghum | nucleus, plastid | 58.28 | 46.57 |
| EES03472 | Sorghum | nucleus, plastid | 58.9 | 46.49 |
| HORVU1Hr1G082670.6 | Barley | nucleus | 55.83 | 46.31 |
| Zm00001d038907_P001 | Maize | nucleus, plastid | 57.67 | 46.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 52.15 | 45.45 |
| Zm00001d011639_P001 | Maize | nucleus | 56.13 | 45.19 |
| TraesCS1B01G392000.1 | Wheat | nucleus | 56.44 | 44.77 |
| TraesCS1D01G378400.1 | Wheat | nucleus | 55.83 | 44.17 |
| TraesCS1A01G372200.1 | Wheat | nucleus | 55.52 | 43.83 |
| TraesCS1D01G378500.1 | Wheat | nucleus | 55.83 | 43.44 |
| TraesCS1D01G378800.1 | Wheat | nucleus | 55.21 | 43.37 |
| CDY67348 | Canola | nucleus | 19.94 | 43.33 |
| TraesCS1B01G392200.1 | Wheat | nucleus, plastid | 55.21 | 43.27 |
| TraesCS1A01G372100.1 | Wheat | nucleus | 55.21 | 40.72 |
| GSMUA_Achr3P21100_001 | Banana | nucleus | 50.0 | 39.56 |
| CDY43751 | Canola | nucleus | 27.3 | 36.63 |
| CDX84162 | Canola | nucleus | 26.99 | 36.21 |
| CDX73868 | Canola | nucleus | 25.46 | 35.17 |
| CDX75073 | Canola | nucleus | 26.69 | 35.08 |
| CDY43060 | Canola | cytosol | 17.18 | 34.36 |
| CDY62470 | Canola | nucleus | 23.93 | 34.21 |
| CDY08512 | Canola | nucleus | 25.77 | 33.87 |
| CDY01036 | Canola | nucleus | 25.77 | 32.68 |
| CDY47260 | Canola | nucleus | 25.77 | 31.46 |
| CDY65812 | Canola | nucleus | 26.99 | 31.32 |
| CDY29599 | Canola | nucleus | 30.67 | 30.77 |
| CDX80053 | Canola | nucleus | 27.61 | 30.3 |
| CDX80996 | Canola | nucleus | 25.15 | 29.82 |
| CDY37130 | Canola | nucleus | 30.98 | 29.79 |
| CDY41564 | Canola | nucleus | 26.99 | 29.63 |
| CDY35575 | Canola | nucleus | 31.29 | 29.57 |
| CDY37109 | Canola | nucleus | 30.06 | 29.43 |
| CDY22814 | Canola | nucleus | 30.06 | 29.08 |
| CDY29620 | Canola | nucleus | 30.67 | 29.07 |
| CDY22826 | Canola | nucleus | 30.06 | 28.99 |
| CDY46564 | Canola | nucleus | 30.06 | 28.91 |
| CDY51249 | Canola | nucleus | 30.06 | 28.91 |
| CDY69432 | Canola | nucleus | 24.54 | 28.78 |
| CDX67872 | Canola | nucleus | 25.15 | 28.77 |
| CDY27515 | Canola | nucleus | 26.69 | 28.62 |
| CDX83351 | Canola | nucleus | 26.99 | 28.57 |
| CDY48008 | Canola | nucleus | 26.38 | 28.29 |
| CDY50908 | Canola | nucleus | 26.99 | 27.94 |
| CDY22801 | Canola | nucleus | 29.75 | 27.87 |
| CDY11388 | Canola | nucleus | 24.85 | 27.74 |
| CDX76605 | Canola | nucleus | 24.85 | 27.74 |
| CDY15208 | Canola | nucleus | 27.3 | 27.64 |
| CDY25209 | Canola | nucleus | 30.06 | 27.61 |
| CDY37108 | Canola | nucleus, plastid | 28.53 | 27.11 |
| CDX90001 | Canola | nucleus | 27.91 | 26.45 |
| CDX97251 | Canola | nucleus | 27.3 | 26.25 |
| CDY58763 | Canola | nucleus | 25.15 | 25.79 |
| CDY58764 | Canola | nucleus | 25.15 | 25.62 |
| CDY07140 | Canola | nucleus | 23.31 | 24.84 |
| CDY49614 | Canola | nucleus | 23.01 | 24.19 |
| CDX98911 | Canola | nucleus | 17.18 | 23.43 |
| CDY70080 | Canola | nucleus | 17.18 | 23.43 |
Protein Annotations
| MapMan:15.5.5.3 | MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | GO:A0A078J025 | UniProt:A0A078J025 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:B3_DNA-bd | EnsemblPlants:CDY58354 | ProteinID:CDY58354 | ProteinID:CDY58354.1 |
| InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00023485001 | InterPro:IPR001471 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:IPR036955 | PFAM:PF00847 |
| PFAM:PF02362 | PFscan:PS50863 | PFscan:PS51032 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF9 | SMART:SM00380 |
| SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54171 | UniParc:UPI0004EE96A1 | SEG:seg | : |
Description
BnaCnng33070DBnaCnng33070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J025]
Coordinates
chrLK033660:-:22617..24008
Molecular Weight (calculated)
36468.8 Da
IEP (calculated)
10.047
GRAVY (calculated)
-0.593
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSSVDEST TSTCSIYETP AITPAKTSVN LHRMGSGSSV VLDAENGAEA ESRKLPSSKY KGVVPQPNGR WGAQIYEKHQ RVWLGTFNEE DEAARSYDVA
101: VHRFRGRDAV TNFKDARLDD GEVEFLSSHS KSGIVDMLRK HTYSEELEQS KRRRNGNGNA VRSAVSLFEK AVTPSDVGKL NRLVIPKHHA EKYFPLPPSS
201: NVSVKGVLLN FEDVAGKVWR FRYSYWNSSQ SYVLTKGWSR FVKEKNLRAG DVVSFSRSDG QDQQLYIGWK SRSGSDVETG RVLRLFGVNV SPAGSRNDVV
301: GNKRVVNDTE MLSLVCSKKR RIFHAL
101: VHRFRGRDAV TNFKDARLDD GEVEFLSSHS KSGIVDMLRK HTYSEELEQS KRRRNGNGNA VRSAVSLFEK AVTPSDVGKL NRLVIPKHHA EKYFPLPPSS
201: NVSVKGVLLN FEDVAGKVWR FRYSYWNSSQ SYVLTKGWSR FVKEKNLRAG DVVSFSRSDG QDQQLYIGWK SRSGSDVETG RVLRLFGVNV SPAGSRNDVV
301: GNKRVVNDTE MLSLVCSKKR RIFHAL
001: MESSSVDEST TSTGSICETP AITPAKKSSV GNLYRMGSGS SVVLDSENGV EAESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS
Arabidopsis Description
RAV1AP2/ERF and B3 domain-containing transcription factor RAV1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.