Factsheet for Os05t0549800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038907_P001	Maize	nucleus, plastid	78.43	66.26
KXG22484	Sorghum	nucleus, plastid	77.26	64.95
TraesCS1D01G378900.1	Wheat	nucleus	71.72	62.76
TraesCS1A01G372300.1	Wheat	nucleus	71.43	62.5
HORVU1Hr1G082670.6	Barley	nucleus	71.14	62.09
TraesCS1B01G392300.1	Wheat	nucleus	70.26	61.64
Os01t0693400-01	Rice	nucleus	69.68	60.81
TraesCS1B01G392000.1	Wheat	nucleus	70.85	59.12
TraesCS1D01G378400.1	Wheat	nucleus	69.1	57.52
TraesCS1D01G378800.1	Wheat	nucleus	69.39	57.35
TraesCS1A01G372200.1	Wheat	nucleus	68.8	57.14
TraesCS1B01G392200.1	Wheat	nucleus, plastid	68.22	56.25
TraesCS1D01G378500.1	Wheat	nucleus	67.64	55.37
HORVU4Hr1G074300.4	Barley	nucleus	23.91	54.67
GSMUA_Achr1P21250_001	Banana	nucleus	45.48	53.06
CDX97996	Canola	nucleus	49.85	52.62
CDY61361	Canola	nucleus	50.15	52.6
TraesCS1A01G372100.1	Wheat	nucleus	67.35	52.26
Os01t0140700-00	Rice	nucleus	47.81	51.73
CDY58354	Canola	nucleus	48.69	51.23
CDY72302	Canola	nucleus	48.69	51.23
KRH34761	Soybean	nucleus	52.19	51.0
Bra019821.1-P	Field mustard	nucleus	50.15	50.44
Bra026917.1-P	Field mustard	nucleus	49.56	50.0
KRG92025	Soybean	nucleus	52.77	50.0
CDY40973	Canola	nucleus	45.77	49.84
AT1G13260.1	Thale cress	nucleus	49.56	49.42
CDY24391	Canola	nucleus	48.69	49.41
CDX81561	Canola	nucleus	48.98	48.98
CDX84999	Canola	nucleus	50.15	48.59
AT1G68840.1	Thale cress	nucleus	49.85	48.58
CDY36099	Canola	nucleus	49.56	48.57
AT3G25730.1	Thale cress	nucleus	46.94	48.35
CDY16133	Canola	nucleus	50.15	48.04
CDY45849	Canola	nucleus, plastid	48.98	48.0
Bra038346.1-P	Field mustard	nucleus, plastid	48.98	48.0
Os01t0141000-01	Rice	nucleus, plastid	51.02	47.95
Bra026509.1-P	Field mustard	nucleus	45.19	47.55
Bra011002.1-P	Field mustard	nucleus	49.56	47.35
CDX99755	Canola	nucleus	46.94	47.35
GSMUA_Achr6P01420_001	Banana	nucleus	43.44	47.15
AT1G25560.1	Thale cress	nucleus	49.56	47.09
KRH75484	Soybean	nucleus	52.48	46.88
VIT_01s0011g03070.t01	Wine grape	nucleus	51.31	46.56
Bra024735.1-P	Field mustard	nucleus	50.44	46.51
Solyc05g009790.1.1	Tomato	nucleus	52.77	45.82
PGSC0003DMT400002125	Potato	nucleus	53.06	45.73
KRH70603	Soybean	nucleus	52.77	45.14
CDX83547	Canola	nucleus	41.11	43.52
Os06t0107800-02	Rice	nucleus	23.91	41.21
Os11t0156000-01	Rice	nucleus	26.82	32.97
Os04t0581400-01	Rice	nucleus	27.7	32.42
Os08t0157700-00	Rice	nucleus	24.78	29.62
Os10t0537100-00	Rice	nucleus	26.82	29.49
Os03t0120900-01	Rice	nucleus	26.24	28.94
Os02t0683500-01	Rice	nucleus	30.9	25.73
Os02t0764100-01	Rice	mitochondrion	18.95	25.69
Os02t0455800-01	Rice	nucleus	18.66	23.97
Os02t0455900-00	Rice	nucleus	16.62	20.96
Os12t0157000-01	Rice	cytosol, nucleus	11.08	18.1

Protein Annotations

MapMan:15.5.5.3	MapMan:15.5.7.5	Gene3D:2.40.330.10	Gene3D:3.30.730.10	UniProt:A0A0P0WPQ8	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:B3_DNA-bd	ProteinID:BAS95202.1	InterPro:DNA-bd_dom_sf	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001471
InterPro:IPR003340	InterPro:IPR015300	InterPro:IPR036955	EnsemblPlantsGene:Os05g0549800	EnsemblPlants:Os05t0549800-01	PFAM:PF00847
PFAM:PF02362	PFscan:PS50863	PFscan:PS51032	PANTHER:PTHR31140	PANTHER:PTHR31140:SF21	SMART:SM00380
SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF54171	UniParc:UPI000393A610	SEG:seg	:

Description

APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 96Similar to DNA-binding protein RAV1. (Os05t0549800-01)

Coordinates

chr5:+:27303137..27304314

Molecular Weight (calculated)

36629.6 Da

IEP (calculated)

10.365

GRAVY (calculated)

-0.305

Length

343 amino acids

Sequence
(BLAST)

001: SGGERRGGGG GKLPSSKYKG VVPQPNGRWG AQIYERHQRV WLGTFTGEAE AARAYDVAAQ RFRGRDAVTN FRPLAESDPE AAVELRFLAS RSKAEVVDML
101: RKHTYLEELT QNKRAFAAIS PPPPKHPASS PTSSSAAREH LFDKTVTPSD VGKLNRLVIP KQHAEKHFPL QLPPPTTTSS VAAAADAAAG GGDCKGVLLN
201: FEDAAGKVWK FRYSYWNSSQ SYVLTKGWSR FVKEKGLHAG DAVGFYRAAG KNAQLFIDCK VRAKPTTAAA AAAFLSAVAA AAAPPPAVKA IRLFGVDLLT
301: AAAPELQDAG GAAMTKSKRA MDAMAESQAH VVFKKQCIEL ALT

Best Arabidopsis Sequence Match ( AT1G68840.2 )
(BLAST)

001: MDSSCIDEIS SSTSESFSAT TAKKLSPPPA AALRLYRMGS GGSSVVLDPE NGLETESRKL PSSKYKGVVP QPNGRWGAQI YEKHQRVWLG TFNEQEEAAR
101: SYDIAACRFR GRDAVVNFKN VLEDGDLAFL EAHSKAEIVD MLRKHTYADE LEQNNKRQLF LSVDANGKRN GSSTTQNDKV LKTREVLFEK AVTPSDVGKL
201: NRLVIPKQHA EKHFPLPSPS PAVTKGVLIN FEDVNGKVWR FRYSYWNSSQ SYVLTKGWSR FVKEKNLRAG DVVTFERSTG LERQLYIDWK VRSGPRENPV
301: QVVVRLFGVD IFNVTTVKPN DVVAVCGGKR SRDVDDMFAL RCSKKQAIIN AL

Arabidopsis Description

RAV2TEM2 [Source:UniProtKB/TrEMBL;Acc:A0A178WNP0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.