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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 4
  • nucleus 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026509.1-P Field mustard nucleus 98.1 94.79
CDX99755 Canola nucleus 95.24 88.24
CDX83547 Canola nucleus 78.73 76.54
AT3G25730.1 Thale cress nucleus 80.32 75.98
CDX97996 Canola nucleus 73.02 70.77
CDY61361 Canola nucleus 72.7 70.03
CDY72302 Canola nucleus 72.38 69.94
CDY58354 Canola nucleus 71.11 68.71
CDY24391 Canola nucleus 61.59 57.4
CDX81561 Canola nucleus 61.9 56.85
CDX84999 Canola nucleus 63.81 56.78
CDY36099 Canola nucleus 62.54 56.29
CDY16133 Canola nucleus 63.49 55.87
CDY45849 Canola nucleus, plastid 61.59 55.43
GSMUA_Achr5P09950_001 Banana nucleus 55.24 54.04
GSMUA_Achr1P05400_001 Banana nucleus 51.11 54.03
KRH34761 Soybean nucleus 60.0 53.85
VIT_01s0011g03070.t01 Wine grape nucleus 63.49 52.91
KRG92025 Soybean nucleus 60.32 52.49
GSMUA_Achr10P... Banana nucleus 48.57 52.4
Solyc05g009790.1.1 Tomato nucleus 63.17 50.38
GSMUA_Achr4P03670_001 Banana nucleus 46.98 50.34
KRH75484 Soybean nucleus 61.27 50.26
PGSC0003DMT400002125 Potato nucleus 63.49 50.25
GSMUA_Achr6P09880_001 Banana nucleus 46.03 50.17
GSMUA_Achr2P22560_001 Banana nucleus 49.21 50.0
KRH70603 Soybean nucleus 62.54 49.13
GSMUA_Achr3P29380_001 Banana nucleus 40.95 49.05
TraesCS3D01G260100.1 Wheat nucleus 57.46 48.4
TraesCS3A01G259900.1 Wheat nucleus 56.83 47.73
TraesCS3B01G293000.1 Wheat nucleus 57.78 47.52
HORVU4Hr1G074300.4 Barley nucleus 22.54 47.33
Zm00001d009468_P001 Maize nucleus, plastid 55.56 46.67
HORVU3Hr1G064640.4 Barley nucleus 56.19 46.58
Os01t0693400-01 Rice nucleus 57.14 45.8
Os05t0549800-01 Rice nucleus 49.84 45.77
Zm00001d043782_P001 Maize nucleus 56.51 45.76
TraesCS1B01G392300.1 Wheat nucleus 56.51 45.52
TraesCS1A01G372300.1 Wheat nucleus 56.19 45.15
TraesCS1D01G378900.1 Wheat nucleus 56.19 45.15
GSMUA_Achr4P06710_001 Banana nucleus 50.16 45.14
GSMUA_Achr9P21470_001 Banana nucleus 43.81 44.52
HORVU1Hr1G082670.6 Barley nucleus 54.92 44.02
Zm00001d038907_P001 Maize nucleus, plastid 56.51 43.84
KXG22484 Sorghum nucleus, plastid 56.51 43.63
EES03472 Sorghum nucleus, plastid 57.14 43.58
TraesCS1B01G392000.1 Wheat nucleus 55.87 42.82
HORVU3Hr1G064590.1 Barley nucleus 26.35 42.78
TraesCS1D01G378400.1 Wheat nucleus 55.87 42.72
Zm00001d011639_P001 Maize nucleus 54.92 42.72
TraesCS1A01G372200.1 Wheat nucleus 55.87 42.62
TraesCS1B01G392200.1 Wheat nucleus, plastid 56.19 42.55
GSMUA_AchrUn_... Banana nucleus 50.16 42.25
CDY67348 Canola nucleus 20.0 42.0
TraesCS1D01G378500.1 Wheat nucleus 55.56 41.77
TraesCS1D01G378800.1 Wheat nucleus 54.92 41.69
TraesCS1A01G372100.1 Wheat nucleus 55.24 39.37
GSMUA_Achr3P21100_001 Banana nucleus 48.57 37.14
CDX84162 Canola nucleus 25.71 33.33
CDY43751 Canola nucleus 25.71 33.33
CDX73868 Canola nucleus 24.76 33.05
CDX75073 Canola nucleus 25.71 32.66
CDY62470 Canola nucleus 23.17 32.02
CDY43060 Canola cytosol 16.51 31.9
CDY08512 Canola nucleus 23.81 30.24
CDY01036 Canola nucleus 24.13 29.57
CDY65812 Canola nucleus 26.35 29.54
CDY37109 Canola nucleus 31.11 29.43
CDY22826 Canola nucleus 31.43 29.29
CDY47260 Canola nucleus 24.76 29.21
CDY37130 Canola nucleus 31.43 29.2
CDY22814 Canola nucleus 31.11 29.08
CDY29599 Canola nucleus 29.84 28.92
CDY46564 Canola nucleus 30.48 28.32
CDY51249 Canola nucleus 30.48 28.32
CDY29620 Canola nucleus 30.79 28.2
CDY35575 Canola nucleus 30.79 28.12
CDX80053 Canola nucleus 26.03 27.61
CDY25209 Canola nucleus 31.11 27.61
CDX80996 Canola nucleus 23.81 27.27
CDY41564 Canola nucleus 25.71 27.27
CDY22801 Canola nucleus 29.84 27.01
CDY69432 Canola nucleus 23.81 26.98
CDY37108 Canola nucleus, plastid 29.21 26.82
CDX67872 Canola nucleus 24.13 26.67
CDY15208 Canola nucleus 26.67 26.09
CDY11388 Canola nucleus 24.13 26.03
CDX76605 Canola nucleus 24.13 26.03
CDY27515 Canola nucleus 25.08 25.99
CDX83351 Canola nucleus 25.4 25.97
CDY48008 Canola nucleus 24.76 25.66
CDY50908 Canola nucleus 25.4 25.4
CDX97251 Canola nucleus 26.67 24.78
CDX90001 Canola nucleus 26.98 24.71
CDY58763 Canola nucleus 24.44 24.21
CDY58764 Canola nucleus 24.44 24.06
CDY07140 Canola nucleus 22.86 23.53
CDY49614 Canola nucleus 22.54 22.9
CDX98911 Canola nucleus 15.56 20.5
CDY70080 Canola nucleus 15.56 20.5
Protein Annotations
MapMan:15.5.5.3MapMan:15.5.7.5Gene3D:2.40.330.10Gene3D:3.30.730.10GO:A0A078HW04UniProt:A0A078HW04
InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sfInterPro:B3_DNA-bdEnsemblPlants:CDY40973ProteinID:CDY40973ProteinID:CDY40973.1
InterPro:DNA-bd_dom_sfInterPro:DNA-bd_pseudobarrel_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00072242001InterPro:IPR001471InterPro:IPR003340InterPro:IPR015300InterPro:IPR036955PFAM:PF00847
PFAM:PF02362PFscan:PS50863PFscan:PS51032PANTHER:PTHR31140PANTHER:PTHR31140:SF9SMART:SM00380
SMART:SM01019SUPFAM:SSF101936SUPFAM:SSF54171UniParc:UPI0004EF27D0SEG:seg:
Description
BnaA02g27630DBnaA02g27630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HW04]
Coordinates
chrLK032487:+:18769..19743
Molecular Weight (calculated)
35391.9 Da
IEP (calculated)
9.959
GRAVY (calculated)
-0.550
Length
315 amino acids
Sequence
(BLAST)
001: MEAVSSVDES STSTVSIHTS AKIIPPPTTA KLSSPASLYR MGSGSSVVLD SENGVEAESR KLPSSKFKGV VPQPNGRWGA QIYEKHKRVW LGTFNEEEEA
101: ARVYDVAAHR FRGPDAVTNF KPDATFRNGD GEEVEFLNAH SKYEIVDMLR KHTYKEELEQ RKRKQTAFAN VTVATGFKTA ECLFEKTVTP SDVGKLNRLV
201: IPKHQAEKHF PLPLTGDVSV RGTLLNFEDV NGKVWRFRYS YWNSSQSYVL TKGWSRFVKE KRLCAGDLIS FKRSNGQDQQ LYIGWKSGLE QDTGRVVVRL
301: FGVDIASIKS RKTMS
Best Arabidopsis Sequence Match ( AT3G25730.1 )
(BLAST)
001: MDAMSSVDES STTTDSIPAR KSSSPASLLY RMGSGTSVVL DSENGVEVEV EAESRKLPSS RFKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAAHRFRGRD AVTNFKDTTF EEEVEFLNAH SKSEIVDMLR KHTYKEELDQ RKRNRDGNGK ETTAFALASM VVMTGFKTAE LLFEKTVTPS DVGKLNRLVI
201: PKHQAEKHFP LPLGNNNVSV KGMLLNFEDV NGKVWRFRYS YWNSSQSYVL TKGWSRFVKE KRLCAGDLIS FKRSNDQDQK FFIGWKSKSG LDLETGRVMR
301: LFGVDISLNA VVVVKETTEV LMSSLRCKKQ RVL
Arabidopsis Description
ARF14AP2/ERF and B3 domain-containing transcription factor ARF14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS06]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.