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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P09950_001 Banana nucleus 66.11 61.18
GSMUA_Achr6P01420_001 Banana nucleus 61.74 58.23
GSMUA_AchrUn_... Banana nucleus 72.48 57.75
GSMUA_Achr1P21250_001 Banana nucleus 56.71 57.48
CDX97996 Canola nucleus 57.72 52.92
CDY61361 Canola nucleus 57.72 52.6
AT1G13260.1 Thale cress nucleus 59.73 51.74
CDY72302 Canola nucleus 56.38 51.53
CDY58354 Canola nucleus 56.04 51.23
CDY40973 Canola nucleus 54.03 51.11
Bra019821.1-P Field mustard nucleus 58.05 50.73
AT1G68840.1 Thale cress nucleus 59.73 50.57
GSMUA_Achr2P22560_001 Banana nucleus 52.35 50.32
CDY24391 Canola nucleus 56.71 50.0
Bra026917.1-P Field mustard nucleus 57.05 50.0
CDY36099 Canola nucleus 58.39 49.71
AT1G25560.1 Thale cress nucleus 60.07 49.58
Bra026509.1-P Field mustard nucleus 53.69 49.08
CDX84999 Canola nucleus 58.05 48.87
Bra011002.1-P Field mustard nucleus 58.72 48.75
CDX81561 Canola nucleus 55.7 48.4
AT3G25730.1 Thale cress nucleus 54.03 48.35
CDY16133 Canola nucleus 58.05 48.32
GSMUA_Achr10P... Banana nucleus 46.98 47.95
GSMUA_Achr3P29380_001 Banana nucleus 42.28 47.91
CDX99755 Canola nucleus 54.36 47.65
KRH34761 Soybean nucleus 56.04 47.58
CDY45849 Canola nucleus, plastid 55.37 47.14
Bra038346.1-P Field mustard nucleus, plastid 55.37 47.14
Bra024735.1-P Field mustard nucleus 58.72 47.04
VIT_01s0011g03070.t01 Wine grape nucleus 59.4 46.83
GSMUA_Achr6P09880_001 Banana nucleus 45.3 46.71
GSMUA_Achr4P03670_001 Banana nucleus 45.97 46.6
KRH75484 Soybean nucleus 59.73 46.35
KRG92025 Soybean nucleus 56.04 46.13
CDX83547 Canola nucleus 49.66 45.68
GSMUA_Achr4P06710_001 Banana nucleus 53.02 45.14
KRH70603 Soybean nucleus 60.74 45.14
Solyc05g009790.1.1 Tomato nucleus 58.05 43.8
PGSC0003DMT400002125 Potato nucleus 58.05 43.47
GSMUA_Achr9P21470_001 Banana nucleus 44.63 42.9
GSMUA_Achr9P02600_001 Banana nucleus 26.17 40.41
GSMUA_Achr3P19210_001 Banana nucleus 26.85 39.8
GSMUA_Achr3P21100_001 Banana nucleus 52.35 37.86
GSMUA_Achr4P26430_001 Banana nucleus 29.87 35.6
GSMUA_Achr9P08980_001 Banana nucleus 19.13 35.19
GSMUA_Achr6P35600_001 Banana nucleus 27.52 33.88
GSMUA_Achr4P30170_001 Banana nucleus 27.85 33.33
GSMUA_Achr5P12850_001 Banana nucleus 22.82 32.23
GSMUA_Achr11P... Banana nucleus 19.8 31.89
GSMUA_Achr6P13140_001 Banana nucleus 25.84 31.17
GSMUA_Achr7P04630_001 Banana nucleus 21.14 30.58
GSMUA_Achr4P24970_001 Banana nucleus 23.15 29.36
GSMUA_AchrUn_... Banana cytosol 23.49 29.05
GSMUA_Achr1P03600_001 Banana nucleus 30.87 27.88
GSMUA_Achr4P12210_001 Banana nucleus 20.81 27.68
GSMUA_Achr5P10220_001 Banana nucleus 23.15 25.37
GSMUA_Achr5P20340_001 Banana nucleus 27.52 24.33
GSMUA_Achr2P00400_001 Banana nucleus 23.49 24.31
GSMUA_Achr9P18780_001 Banana nucleus 23.15 24.13
GSMUA_Achr2P10230_001 Banana nucleus 24.5 24.01
GSMUA_Achr6P18320_001 Banana nucleus 25.84 22.65
GSMUA_Achr11P... Banana nucleus 25.17 22.32
GSMUA_Achr8P14650_001 Banana nucleus 30.54 21.98
Protein Annotations
MapMan:15.5.5.3MapMan:15.5.7.5Gene3D:2.40.330.10Gene3D:3.30.730.10InterPro:AP2/ERF_domInterPro:AP2/ERF_dom_sf
InterPro:B3_DNA-bdInterPro:DNA-bd_dom_sfInterPro:DNA-bd_pseudobarrel_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987EnsemblPlantsGene:GSMUA_Achr1G05400_001EnsemblPlants:GSMUA_Achr1P05400_001EnsemblPlants:GSMUA_Achr1T05400_001InterPro:IPR001471InterPro:IPR003340
InterPro:IPR015300InterPro:IPR036955UniProt:M0RX98PFAM:PF00847PFAM:PF02362PRINTS:PR00367
PFscan:PS50863PFscan:PS51032PANTHER:PTHR31140PANTHER:PTHR31140:SF21SMART:SM00380SMART:SM01019
SUPFAM:SSF101936SUPFAM:SSF54171UniParc:UPI000296710BSEG:seg::
Description
AP2/ERF and B3 domain-containing transcription factor RAV1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G05400_001]
Coordinates
chr1:-:4429933..4430946
Molecular Weight (calculated)
33646.8 Da
IEP (calculated)
10.151
GRAVY (calculated)
-0.730
Length
298 amino acids
Sequence
(BLAST)
001: METSSVEDES SEVERRSSPP RPPTLPATEG LQRLGSGASV VLDPEVGAES RKLPSSRYKG VVPQPNGRWG AQIYDKHQRV WLGTFNEEDE AARAYDIVDM
101: LRKHIYHDEM RQSRQSSGAE GRRTYPSRGG SMGWFGGPHR EHLFDKAVTP SDVGKLNRLV IPKQHAEKHF PQPQTGAAAC KAVLLNFEDA CGKVWRFRYS
201: YWNSSQSYVL TKGWRRFVKE EGLRAGDVVT FHRSTGPERQ LFIGRKTRPA VEVVRLFGVN IADVSGVVRR NAKRTCRDME STVSSSCELL KRRCREGL
Best Arabidopsis Sequence Match ( AT1G13260.1 )
(BLAST)
001: MESSSVDEST TSTGSICETP AITPAKKSSV GNLYRMGSGS SVVLDSENGV EAESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS
Arabidopsis Description
RAV1AP2/ERF and B3 domain-containing transcription factor RAV1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWM9]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.