Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr5P09950_001 | Banana | nucleus | 66.11 | 61.18 |
GSMUA_Achr6P01420_001 | Banana | nucleus | 61.74 | 58.23 |
GSMUA_AchrUn_... | Banana | nucleus | 72.48 | 57.75 |
GSMUA_Achr1P21250_001 | Banana | nucleus | 56.71 | 57.48 |
CDX97996 | Canola | nucleus | 57.72 | 52.92 |
CDY61361 | Canola | nucleus | 57.72 | 52.6 |
AT1G13260.1 | Thale cress | nucleus | 59.73 | 51.74 |
CDY72302 | Canola | nucleus | 56.38 | 51.53 |
CDY58354 | Canola | nucleus | 56.04 | 51.23 |
CDY40973 | Canola | nucleus | 54.03 | 51.11 |
Bra019821.1-P | Field mustard | nucleus | 58.05 | 50.73 |
AT1G68840.1 | Thale cress | nucleus | 59.73 | 50.57 |
GSMUA_Achr2P22560_001 | Banana | nucleus | 52.35 | 50.32 |
CDY24391 | Canola | nucleus | 56.71 | 50.0 |
Bra026917.1-P | Field mustard | nucleus | 57.05 | 50.0 |
CDY36099 | Canola | nucleus | 58.39 | 49.71 |
AT1G25560.1 | Thale cress | nucleus | 60.07 | 49.58 |
Bra026509.1-P | Field mustard | nucleus | 53.69 | 49.08 |
CDX84999 | Canola | nucleus | 58.05 | 48.87 |
Bra011002.1-P | Field mustard | nucleus | 58.72 | 48.75 |
CDX81561 | Canola | nucleus | 55.7 | 48.4 |
AT3G25730.1 | Thale cress | nucleus | 54.03 | 48.35 |
CDY16133 | Canola | nucleus | 58.05 | 48.32 |
GSMUA_Achr10P... | Banana | nucleus | 46.98 | 47.95 |
GSMUA_Achr3P29380_001 | Banana | nucleus | 42.28 | 47.91 |
CDX99755 | Canola | nucleus | 54.36 | 47.65 |
KRH34761 | Soybean | nucleus | 56.04 | 47.58 |
CDY45849 | Canola | nucleus, plastid | 55.37 | 47.14 |
Bra038346.1-P | Field mustard | nucleus, plastid | 55.37 | 47.14 |
Bra024735.1-P | Field mustard | nucleus | 58.72 | 47.04 |
VIT_01s0011g03070.t01 | Wine grape | nucleus | 59.4 | 46.83 |
GSMUA_Achr6P09880_001 | Banana | nucleus | 45.3 | 46.71 |
GSMUA_Achr4P03670_001 | Banana | nucleus | 45.97 | 46.6 |
KRH75484 | Soybean | nucleus | 59.73 | 46.35 |
KRG92025 | Soybean | nucleus | 56.04 | 46.13 |
CDX83547 | Canola | nucleus | 49.66 | 45.68 |
GSMUA_Achr4P06710_001 | Banana | nucleus | 53.02 | 45.14 |
KRH70603 | Soybean | nucleus | 60.74 | 45.14 |
Solyc05g009790.1.1 | Tomato | nucleus | 58.05 | 43.8 |
PGSC0003DMT400002125 | Potato | nucleus | 58.05 | 43.47 |
GSMUA_Achr9P21470_001 | Banana | nucleus | 44.63 | 42.9 |
GSMUA_Achr9P02600_001 | Banana | nucleus | 26.17 | 40.41 |
GSMUA_Achr3P19210_001 | Banana | nucleus | 26.85 | 39.8 |
GSMUA_Achr3P21100_001 | Banana | nucleus | 52.35 | 37.86 |
GSMUA_Achr4P26430_001 | Banana | nucleus | 29.87 | 35.6 |
GSMUA_Achr9P08980_001 | Banana | nucleus | 19.13 | 35.19 |
GSMUA_Achr6P35600_001 | Banana | nucleus | 27.52 | 33.88 |
GSMUA_Achr4P30170_001 | Banana | nucleus | 27.85 | 33.33 |
GSMUA_Achr5P12850_001 | Banana | nucleus | 22.82 | 32.23 |
GSMUA_Achr11P... | Banana | nucleus | 19.8 | 31.89 |
GSMUA_Achr6P13140_001 | Banana | nucleus | 25.84 | 31.17 |
GSMUA_Achr7P04630_001 | Banana | nucleus | 21.14 | 30.58 |
GSMUA_Achr4P24970_001 | Banana | nucleus | 23.15 | 29.36 |
GSMUA_AchrUn_... | Banana | cytosol | 23.49 | 29.05 |
GSMUA_Achr1P03600_001 | Banana | nucleus | 30.87 | 27.88 |
GSMUA_Achr4P12210_001 | Banana | nucleus | 20.81 | 27.68 |
GSMUA_Achr5P10220_001 | Banana | nucleus | 23.15 | 25.37 |
GSMUA_Achr5P20340_001 | Banana | nucleus | 27.52 | 24.33 |
GSMUA_Achr2P00400_001 | Banana | nucleus | 23.49 | 24.31 |
GSMUA_Achr9P18780_001 | Banana | nucleus | 23.15 | 24.13 |
GSMUA_Achr2P10230_001 | Banana | nucleus | 24.5 | 24.01 |
GSMUA_Achr6P18320_001 | Banana | nucleus | 25.84 | 22.65 |
GSMUA_Achr11P... | Banana | nucleus | 25.17 | 22.32 |
GSMUA_Achr8P14650_001 | Banana | nucleus | 30.54 | 21.98 |
Protein Annotations
MapMan:15.5.5.3 | MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
InterPro:B3_DNA-bd | InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr1G05400_001 | EnsemblPlants:GSMUA_Achr1P05400_001 | EnsemblPlants:GSMUA_Achr1T05400_001 | InterPro:IPR001471 | InterPro:IPR003340 |
InterPro:IPR015300 | InterPro:IPR036955 | UniProt:M0RX98 | PFAM:PF00847 | PFAM:PF02362 | PRINTS:PR00367 |
PFscan:PS50863 | PFscan:PS51032 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF21 | SMART:SM00380 | SMART:SM01019 |
SUPFAM:SSF101936 | SUPFAM:SSF54171 | UniParc:UPI000296710B | SEG:seg | : | : |
Description
AP2/ERF and B3 domain-containing transcription factor RAV1 [Source:GMGC_GENE;Acc:GSMUA_Achr1G05400_001]
Coordinates
chr1:-:4429933..4430946
Molecular Weight (calculated)
33646.8 Da
IEP (calculated)
10.151
GRAVY (calculated)
-0.730
Length
298 amino acids
Sequence
(BLAST)
(BLAST)
001: METSSVEDES SEVERRSSPP RPPTLPATEG LQRLGSGASV VLDPEVGAES RKLPSSRYKG VVPQPNGRWG AQIYDKHQRV WLGTFNEEDE AARAYDIVDM
101: LRKHIYHDEM RQSRQSSGAE GRRTYPSRGG SMGWFGGPHR EHLFDKAVTP SDVGKLNRLV IPKQHAEKHF PQPQTGAAAC KAVLLNFEDA CGKVWRFRYS
201: YWNSSQSYVL TKGWRRFVKE EGLRAGDVVT FHRSTGPERQ LFIGRKTRPA VEVVRLFGVN IADVSGVVRR NAKRTCRDME STVSSSCELL KRRCREGL
101: LRKHIYHDEM RQSRQSSGAE GRRTYPSRGG SMGWFGGPHR EHLFDKAVTP SDVGKLNRLV IPKQHAEKHF PQPQTGAAAC KAVLLNFEDA CGKVWRFRYS
201: YWNSSQSYVL TKGWRRFVKE EGLRAGDVVT FHRSTGPERQ LFIGRKTRPA VEVVRLFGVN IADVSGVVRR NAKRTCRDME STVSSSCELL KRRCREGL
001: MESSSVDEST TSTGSICETP AITPAKKSSV GNLYRMGSGS SVVLDSENGV EAESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS
Arabidopsis Description
RAV1AP2/ERF and B3 domain-containing transcription factor RAV1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWM9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.