Factsheet for GSMUA_Achr6P35600_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P19210_001	Banana	nucleus	50.41	60.7
GSMUA_Achr9P02600_001	Banana	nucleus	47.52	59.59
TraesCS5D01G134700.1	Wheat	nucleus	55.37	50.38
TraesCS5B01G126200.1	Wheat	nucleus	54.96	50.19
TraesCS5A01G127100.1	Wheat	nucleus	54.96	50.0
TraesCS2B01G482400.1	Wheat	nucleus	54.55	49.44
GSMUA_Achr9P08980_001	Banana	nucleus	33.06	49.38
TraesCS2D01G460900.1	Wheat	nucleus	53.72	48.69
TraesCS2A01G460700.1	Wheat	nucleus	53.31	48.5
Os11t0156000-01	Rice	nucleus	55.79	48.39
GSMUA_Achr6P13140_001	Banana	nucleus	49.17	48.18
KXG27771	Sorghum	nucleus	54.13	47.81
TraesCS4A01G198300.2	Wheat	nucleus	54.55	47.31
TraesCS4B01G117100.1	Wheat	nucleus	54.55	47.31
TraesCS4D01G114900.1	Wheat	nucleus	54.13	46.45
Zm00001d023446_P001	Maize	nucleus	52.48	44.88
HORVU5Hr1G040620.4	Barley	nucleus	49.59	43.8
HORVU4Hr1G021650.22	Barley	nucleus	50.0	43.37
GSMUA_Achr11P...	Banana	nucleus	33.06	43.24
CDX73868	Canola	nucleus	41.74	42.8
Bra001411.1-P	Field mustard	nucleus	41.74	42.8
CDX84162	Canola	nucleus	42.15	41.98
AT2G36080.1	Thale cress	nucleus	42.15	41.8
CDY43751	Canola	nucleus	41.74	41.56
Bra017262.1-P	Field mustard	nucleus	41.74	41.22
CDY62470	Canola	nucleus	38.43	40.79
Bra005301.1-P	Field mustard	nucleus	41.74	40.73
CDX75073	Canola	nucleus	41.74	40.73
KXG22988	Sorghum	plastid	53.72	40.62
Zm00001d052591_P001	Maize	nucleus	50.41	39.74
CDY08512	Canola	nucleus	40.5	39.52
Bra041023.1-P	Field mustard	nucleus	42.56	39.02
Bra034828.1-P	Field mustard	nucleus	41.32	38.76
CDY01036	Canola	nucleus	40.91	38.52
Bra005886.1-P	Field mustard	nucleus	41.32	37.45
CDY47260	Canola	nucleus	41.32	37.45
VIT_08s0007g02810.t01	Wine grape	nucleus	43.8	37.19
AT5G06250.4	Thale cress	nucleus	42.98	36.62
KRH67965	Soybean	nucleus	42.15	35.42
GSMUA_Achr4P26430_001	Banana	nucleus	36.36	35.2
KRG96220	Soybean	nucleus	43.39	35.12
GSMUA_Achr4P30170_001	Banana	nucleus	35.95	34.94
PGSC0003DMT400072354	Potato	nucleus	41.32	34.72
KRH32791	Soybean	nucleus	46.69	33.53
CDX80996	Canola	nucleus	38.02	33.45
Solyc10g083210.1.1	Tomato	nucleus	42.56	33.44
KRH72242	Soybean	nucleus	47.52	33.43
GSMUA_Achr7P04630_001	Banana	nucleus	27.27	32.04
Os12t0157000-01	Rice	cytosol, nucleus	27.69	31.9
GSMUA_Achr5P12850_001	Banana	nucleus	27.69	31.75
PGSC0003DMT400023077	Potato	nucleus	42.56	30.75
Solyc09g010230.1.1	Tomato	nucleus	43.8	30.72
Bra009171.1-P	Field mustard	nucleus	29.34	29.71
CDX98911	Canola	nucleus	29.34	29.71
CDY70080	Canola	nucleus	29.34	29.71
GSMUA_Achr1P03600_001	Banana	nucleus	40.5	29.7
GSMUA_Achr4P24970_001	Banana	nucleus	27.69	28.51
GSMUA_Achr6P01420_001	Banana	nucleus	37.19	28.48
GSMUA_Achr5P09950_001	Banana	nucleus	36.78	27.64
GSMUA_Achr1P05400_001	Banana	nucleus	33.88	27.52
AT3G11580.3	Thale cress	cytosol, endoplasmic reticulum, nucleus	42.15	27.49
GSMUA_Achr4P12210_001	Banana	nucleus	25.21	27.23
GSMUA_Achr1P21250_001	Banana	nucleus	33.06	27.21
GSMUA_AchrUn_...	Banana	cytosol	26.86	26.97
GSMUA_Achr2P22560_001	Banana	nucleus	33.88	26.45
GSMUA_Achr5P20340_001	Banana	nucleus	35.95	25.82
GSMUA_Achr6P18320_001	Banana	nucleus	35.95	25.59
GSMUA_Achr5P10220_001	Banana	nucleus	28.51	25.37
GSMUA_Achr9P18780_001	Banana	nucleus	29.75	25.17
GSMUA_Achr2P00400_001	Banana	nucleus	28.93	24.31
GSMUA_Achr2P10230_001	Banana	nucleus	28.93	23.03
GSMUA_AchrUn_...	Banana	nucleus	35.54	22.99
GSMUA_Achr6P09880_001	Banana	nucleus	26.45	22.15
GSMUA_Achr4P06710_001	Banana	nucleus	30.99	21.43
GSMUA_Achr3P29380_001	Banana	nucleus	22.31	20.53
GSMUA_Achr3P21100_001	Banana	nucleus	34.3	20.15
GSMUA_Achr4P03670_001	Banana	nucleus	24.38	20.07
GSMUA_Achr9P21470_001	Banana	nucleus	24.38	19.03
GSMUA_Achr10P...	Banana	nucleus	22.31	18.49
GSMUA_Achr8P14650_001	Banana	nucleus	28.51	16.67
GSMUA_Achr11P...	Banana	nucleus	21.07	15.18

Protein Annotations

MapMan:15.5.5.3	Gene3D:2.40.330.10	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr6G35600_001	EnsemblPlants:GSMUA_Achr6P35600_001	EnsemblPlants:GSMUA_Achr6T35600_001	InterPro:IPR003340	InterPro:IPR015300
UniProt:M0TD03	PFAM:PF02362	PFscan:PS50863	PANTHER:PTHR31140	PANTHER:PTHR31140:SF2	SMART:SM01019
SUPFAM:SSF101936	UniParc:UPI000295DAC7	SEG:seg	:	:	:

Description

B3 domain-containing protein Os11g0156000 [Source:GMGC_GENE;Acc:GSMUA_Achr6G35600_001]

Coordinates

chr6:+:33759607..33760421

Molecular Weight (calculated)

27952.1 Da

IEP (calculated)

8.333

GRAVY (calculated)

-0.692

Length

242 amino acids

Sequence
(BLAST)

001: MSMNPLARHH PQAWTWEESP MINPRQYFHY TYRVGQEGVE HEREHMFEKP LTPSDVGKLN RLVIPKQHAE KYFPLDGDSG EKGHLLSFED ESGKPWRFRY
101: SYWTSSQSYV LTKGWSGFVK EKRLDAGDVV FFERLRHRGD RFYISCRRRS EDESPPAACT LTMANAAAPW IPMCYTARAS STTRLALRAD DEVDVVRSKA
201: MGRPTHSKRL RLFGVNLDCV PELETQLVLA PETGQVHAHQ NL

Best Arabidopsis Sequence Match ( AT2G36080.1 )
(BLAST)

001: MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL NRLVIPKQHA ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS

Arabidopsis Description

ARF31B3 domain-containing protein At2g36080 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.