Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G126200.1 | Wheat | nucleus | 97.74 | 98.11 |
| TraesCS2D01G460900.1 | Wheat | nucleus | 93.98 | 93.63 |
| TraesCS2A01G460700.1 | Wheat | nucleus | 92.48 | 92.48 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 79.32 | 74.82 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 75.94 | 73.72 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 46.62 | 61.69 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 42.48 | 58.55 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 53.01 | 57.09 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 50.38 | 55.37 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 28.95 | 47.53 |
| Bra017262.1-P | Field mustard | nucleus | 43.61 | 47.35 |
| CDY43751 | Canola | nucleus | 43.23 | 47.33 |
| AT2G36080.1 | Thale cress | nucleus | 42.86 | 46.72 |
| CDX84162 | Canola | nucleus | 42.48 | 46.5 |
| CDX75073 | Canola | nucleus | 43.23 | 46.37 |
| Bra005301.1-P | Field mustard | nucleus | 43.23 | 46.37 |
| Bra001411.1-P | Field mustard | nucleus | 40.23 | 45.34 |
| CDX73868 | Canola | nucleus | 40.23 | 45.34 |
| CDY01036 | Canola | nucleus | 42.86 | 44.36 |
| CDY08512 | Canola | nucleus | 41.35 | 44.35 |
| CDY62470 | Canola | nucleus | 37.97 | 44.3 |
| GSMUA_Achr11P... | Banana | nucleus | 30.45 | 43.78 |
| Bra034828.1-P | Field mustard | nucleus | 42.11 | 43.41 |
| Bra041023.1-P | Field mustard | nucleus | 42.11 | 42.42 |
| AT5G06250.4 | Thale cress | nucleus | 43.23 | 40.49 |
| Bra005886.1-P | Field mustard | nucleus | 40.6 | 40.45 |
| CDY47260 | Canola | nucleus | 40.6 | 40.45 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 42.86 | 40.0 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 29.32 | 39.8 |
| PGSC0003DMT400072354 | Potato | nucleus | 40.6 | 37.5 |
| KRH67965 | Soybean | nucleus | 39.85 | 36.81 |
| KRG96220 | Soybean | nucleus | 41.35 | 36.79 |
| KRH32791 | Soybean | nucleus | 46.24 | 36.5 |
| CDX80996 | Canola | nucleus | 37.22 | 36.0 |
| Solyc10g083210.1.1 | Tomato | nucleus | 41.35 | 35.71 |
| KRH72242 | Soybean | nucleus | 45.86 | 35.47 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 27.82 | 34.1 |
| PGSC0003DMT400023077 | Potato | nucleus | 42.48 | 33.73 |
| Solyc09g010230.1.1 | Tomato | nucleus | 43.61 | 33.62 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 36.09 | 32.99 |
| CDY70080 | Canola | nucleus | 28.95 | 32.22 |
| Bra009171.1-P | Field mustard | nucleus | 28.95 | 32.22 |
| CDX98911 | Canola | nucleus | 28.95 | 32.22 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 43.23 | 31.0 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 34.96 | 27.35 |
| TraesCS4D01G322500.1 | Wheat | nucleus | 30.83 | 26.89 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 39.1 | 25.43 |
| TraesCS3D01G260100.1 | Wheat | nucleus | 35.34 | 25.13 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 37.59 | 24.15 |
| TraesCS1D01G378900.1 | Wheat | nucleus | 35.34 | 23.98 |
| TraesCS3D01G052300.1 | Wheat | nucleus | 31.58 | 23.6 |
| TraesCS1D01G378400.1 | Wheat | nucleus | 36.09 | 23.3 |
| TraesCS3D01G052400.1 | Wheat | nucleus | 30.83 | 23.23 |
| TraesCS1D01G378800.1 | Wheat | nucleus | 35.71 | 22.89 |
| TraesCS1D01G378500.1 | Wheat | nucleus | 35.71 | 22.67 |
| TraesCS4D01G322600.1 | Wheat | nucleus | 30.45 | 22.38 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G134700.1 | EnsemblPlantsGene:TraesCS5D01G134700 | Gene3D:2.40.330.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | InterPro:IPR003340 | InterPro:IPR015300 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF19 | PFAM:PF02362 | PFscan:PS50863 | SEG:seg | SMART:SM01019 | SUPFAM:SSF101936 |
| TIGR:cd10017 | MapMan:15.5.5.3 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:214918641..214919674
Molecular Weight (calculated)
29907.9 Da
IEP (calculated)
7.746
GRAVY (calculated)
-0.752
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMHPLSQGH PQAWPWGVAM YTNLHYHHQY EREHLFEKPL TPSDVGKLNR LVIPKQHAER YFPLNGGDSP GEKDLLLSFE DEAGKPWRFR YSYWTSSQSY
101: VLTKGWSRYV KEKQLDAGDI VHFERVRGLG TGDRLFIGCR RRGESAPPPP VRVPPPALNA GEHQPWSPMC YSTSGSYPSS PANSYAYRRS VEQDHSDMLH
201: AGESQREADA KSSTASAPPS RRLRLFGVNL DCGPEPEAEA ITPMYGYTHQ SPYAAVATVP SYWGSS
101: VLTKGWSRYV KEKQLDAGDI VHFERVRGLG TGDRLFIGCR RRGESAPPPP VRVPPPALNA GEHQPWSPMC YSTSGSYPSS PANSYAYRRS VEQDHSDMLH
201: AGESQREADA KSSTASAPPS RRLRLFGVNL DCGPEPEAEA ITPMYGYTHQ SPYAAVATVP SYWGSS
001: MSVNHYSTDH HHTLLWQQQQ HRHTTDTSET TTTATWLHDD LKESLFEKSL TPSDVGKLNR LVIPKQHAEK YFPLNAVLVS SAAADTSSSE KGMLLSFEDE
101: SGKSWRFRYS YWNSSQSYVL TKGWSRFVKD KQLDPGDVVF FQRHRSDSRR LFIGWRRRGQ GSSSSVAATN SAVNTSSMGA LSYHQIHATS NYSNPPSHSE
201: YSHYGAAVAT AAETHSTPSS SVVGSSRTVR LFGVNLECQM DENDGDDSVA VATTVESPDG YYGQNII
101: SGKSWRFRYS YWNSSQSYVL TKGWSRFVKD KQLDPGDVVF FQRHRSDSRR LFIGWRRRGQ GSSSSVAATN SAVNTSSMGA LSYHQIHATS NYSNPPSHSE
201: YSHYGAAVAT AAETHSTPSS SVVGSSRTVR LFGVNLECQM DENDGDDSVA VATTVESPDG YYGQNII
Arabidopsis Description
AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BF34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.