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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017262.1-P Field mustard nucleus 98.35 97.55
AT2G36080.1 Thale cress nucleus 88.48 88.11
CDX75073 Canola nucleus 89.3 87.5
CDX84162 Canola nucleus 84.77 84.77
CDY08512 Canola nucleus 53.5 52.42
CDX73868 Canola nucleus 48.97 50.42
CDY01036 Canola nucleus 53.09 50.19
CDY62470 Canola nucleus 45.68 48.68
CDY47260 Canola nucleus 51.44 46.82
GSMUA_Achr3P19210_001 Banana nucleus 38.68 46.77
GSMUA_Achr9P02600_001 Banana nucleus 36.63 46.11
TraesCS5A01G127100.1 Wheat nucleus 47.74 43.61
TraesCS5B01G126200.1 Wheat nucleus 47.33 43.4
CDX80996 Canola nucleus 48.97 43.27
TraesCS5D01G134700.1 Wheat nucleus 47.33 43.23
GSMUA_Achr6P13140_001 Banana nucleus 43.62 42.91
CDY67348 Canola nucleus 26.34 42.67
Os11t0156000-01 Rice nucleus 48.56 42.29
GSMUA_Achr6P35600_001 Banana nucleus 41.56 41.74
TraesCS2D01G460900.1 Wheat nucleus 45.27 41.2
TraesCS2B01G482400.1 Wheat nucleus 45.27 41.2
TraesCS2A01G460700.1 Wheat nucleus 44.86 40.98
KXG27771 Sorghum nucleus 46.09 40.88
KRH67965 Soybean nucleus 48.15 40.62
CDX98911 Canola nucleus 39.92 40.59
CDY70080 Canola nucleus 39.92 40.59
TraesCS4A01G198300.2 Wheat nucleus 46.09 40.14
VIT_08s0007g02810.t01 Wine grape nucleus 46.91 40.0
KRG96220 Soybean nucleus 48.97 39.8
TraesCS4B01G117100.1 Wheat nucleus 45.68 39.78
TraesCS4D01G114900.1 Wheat nucleus 45.68 39.36
Zm00001d023446_P001 Maize nucleus 44.86 38.52
GSMUA_Achr11P... Banana nucleus 29.22 38.38
GSMUA_Achr9P08980_001 Banana nucleus 25.51 38.27
HORVU4Hr1G021650.22 Barley nucleus 43.21 37.63
HORVU5Hr1G040620.4 Barley nucleus 42.39 37.59
CDY43060 Canola cytosol 24.69 36.81
KRH32791 Soybean nucleus 51.03 36.8
Zm00001d052591_P001 Maize nucleus 45.68 36.16
KRH72242 Soybean nucleus 50.21 35.47
Solyc09g010230.1.1 Tomato nucleus 50.21 35.36
KXG22988 Sorghum plastid 46.09 35.0
PGSC0003DMT400023077 Potato nucleus 47.33 34.33
CDY69432 Canola nucleus 36.21 31.65
CDX67872 Canola nucleus 37.04 31.58
CDY48008 Canola nucleus 39.09 31.25
CDY41564 Canola nucleus 37.86 30.98
CDX80053 Canola nucleus 37.86 30.98
CDY27515 Canola nucleus 38.68 30.92
CDX83351 Canola nucleus 38.27 30.19
CDY50908 Canola nucleus 39.09 30.16
CDY11388 Canola nucleus 35.8 29.79
CDX76605 Canola nucleus 35.8 29.79
CDX97996 Canola nucleus 37.45 28.0
CDY58763 Canola nucleus 36.63 27.99
CDY61361 Canola nucleus 37.45 27.83
CDY58764 Canola nucleus 36.63 27.81
CDY72302 Canola nucleus 36.63 27.3
CDY58354 Canola nucleus 36.63 27.3
CDX90001 Canola nucleus 37.45 26.45
Os12t0157000-01 Rice cytosol, nucleus 22.63 26.19
CDY15208 Canola nucleus 34.57 26.09
CDY40973 Canola nucleus 33.33 25.71
CDY24391 Canola nucleus 35.39 25.44
CDX81561 Canola nucleus 34.98 24.78
CDY45849 Canola nucleus, plastid 35.39 24.57
CDY36099 Canola nucleus 34.98 24.29
CDX84999 Canola nucleus 34.98 24.01
CDX97251 Canola nucleus 33.33 23.89
CDX99755 Canola nucleus 33.33 23.82
CDY16133 Canola nucleus 34.57 23.46
CDY07140 Canola nucleus 29.22 23.2
CDY49614 Canola nucleus 29.22 22.9
GSMUA_Achr6P18320_001 Banana nucleus 30.86 22.06
CDX83547 Canola nucleus 25.93 19.44
CDY29599 Canola nucleus 25.93 19.38
CDY65812 Canola nucleus 22.22 19.22
CDY22814 Canola nucleus 25.1 18.1
CDY37109 Canola nucleus 24.69 18.02
CDY37130 Canola nucleus 24.69 17.7
CDY22826 Canola nucleus 23.87 17.16
CDY29620 Canola nucleus 24.28 17.15
CDY51249 Canola nucleus 23.87 17.11
CDY46564 Canola nucleus 23.87 17.11
CDY35575 Canola nucleus 23.87 16.81
CDY25209 Canola nucleus 23.87 16.34
CDY22801 Canola nucleus 22.63 15.8
CDY37108 Canola nucleus, plastid 22.22 15.74
Protein Annotations
MapMan:15.5.5.3Gene3D:2.40.330.10GO:A0A078I1R3UniProt:A0A078I1R3InterPro:B3_DNA-bdEnsemblPlants:CDY43751
ProteinID:CDY43751ProteinID:CDY43751.1InterPro:DNA-bd_pseudobarrel_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00077247001InterPro:IPR003340InterPro:IPR015300PFAM:PF02362PFscan:PS50863PANTHER:PTHR31140
PANTHER:PTHR31140:SF2SMART:SM01019SUPFAM:SSF101936UniParc:UPI0004EE31A0SEG:seg:
Description
BnaAnng07660DBnaAnng07660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1R3]
Coordinates
chrLK032567:+:215364..218260
Molecular Weight (calculated)
28256.6 Da
IEP (calculated)
6.344
GRAVY (calculated)
-0.847
Length
243 amino acids
Sequence
(BLAST)
001: MSINQYSSEF YYHSLMWQQQ QQHHHQNEVV EEKEALFEKP LTPSDVGKLN RLVIPKQHAE RYFPLAAAAV DAVEKGLLLC FEDEEGKPWR FRYSYWNSSQ
101: SYVLTKGWSR YVKEKQLDAG DVVLFHRHRA DGGRFFIGWR RRGDSSSSSD SYRYLQSNAS LQYYPHAGAQ AVENQRGNSK TLRLFGVNME CQIDSDWSEP
201: STPDGFTTCP TNQDQFPIYP EHYPPPYYMD VSFTGDVHQS QQG
Best Arabidopsis Sequence Match ( AT2G36080.1 )
(BLAST)
001: MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL NRLVIPKQHA ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS
Arabidopsis Description
ARF31B3 domain-containing protein At2g36080 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.