Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra017262.1-P | Field mustard | nucleus | 98.35 | 97.55 |
AT2G36080.1 | Thale cress | nucleus | 88.48 | 88.11 |
CDX75073 | Canola | nucleus | 89.3 | 87.5 |
CDX84162 | Canola | nucleus | 84.77 | 84.77 |
CDY08512 | Canola | nucleus | 53.5 | 52.42 |
CDX73868 | Canola | nucleus | 48.97 | 50.42 |
CDY01036 | Canola | nucleus | 53.09 | 50.19 |
CDY62470 | Canola | nucleus | 45.68 | 48.68 |
CDY47260 | Canola | nucleus | 51.44 | 46.82 |
GSMUA_Achr3P19210_001 | Banana | nucleus | 38.68 | 46.77 |
GSMUA_Achr9P02600_001 | Banana | nucleus | 36.63 | 46.11 |
TraesCS5A01G127100.1 | Wheat | nucleus | 47.74 | 43.61 |
TraesCS5B01G126200.1 | Wheat | nucleus | 47.33 | 43.4 |
CDX80996 | Canola | nucleus | 48.97 | 43.27 |
TraesCS5D01G134700.1 | Wheat | nucleus | 47.33 | 43.23 |
GSMUA_Achr6P13140_001 | Banana | nucleus | 43.62 | 42.91 |
CDY67348 | Canola | nucleus | 26.34 | 42.67 |
Os11t0156000-01 | Rice | nucleus | 48.56 | 42.29 |
GSMUA_Achr6P35600_001 | Banana | nucleus | 41.56 | 41.74 |
TraesCS2D01G460900.1 | Wheat | nucleus | 45.27 | 41.2 |
TraesCS2B01G482400.1 | Wheat | nucleus | 45.27 | 41.2 |
TraesCS2A01G460700.1 | Wheat | nucleus | 44.86 | 40.98 |
KXG27771 | Sorghum | nucleus | 46.09 | 40.88 |
KRH67965 | Soybean | nucleus | 48.15 | 40.62 |
CDX98911 | Canola | nucleus | 39.92 | 40.59 |
CDY70080 | Canola | nucleus | 39.92 | 40.59 |
TraesCS4A01G198300.2 | Wheat | nucleus | 46.09 | 40.14 |
VIT_08s0007g02810.t01 | Wine grape | nucleus | 46.91 | 40.0 |
KRG96220 | Soybean | nucleus | 48.97 | 39.8 |
TraesCS4B01G117100.1 | Wheat | nucleus | 45.68 | 39.78 |
TraesCS4D01G114900.1 | Wheat | nucleus | 45.68 | 39.36 |
Zm00001d023446_P001 | Maize | nucleus | 44.86 | 38.52 |
GSMUA_Achr11P... | Banana | nucleus | 29.22 | 38.38 |
GSMUA_Achr9P08980_001 | Banana | nucleus | 25.51 | 38.27 |
HORVU4Hr1G021650.22 | Barley | nucleus | 43.21 | 37.63 |
HORVU5Hr1G040620.4 | Barley | nucleus | 42.39 | 37.59 |
CDY43060 | Canola | cytosol | 24.69 | 36.81 |
KRH32791 | Soybean | nucleus | 51.03 | 36.8 |
Zm00001d052591_P001 | Maize | nucleus | 45.68 | 36.16 |
KRH72242 | Soybean | nucleus | 50.21 | 35.47 |
Solyc09g010230.1.1 | Tomato | nucleus | 50.21 | 35.36 |
KXG22988 | Sorghum | plastid | 46.09 | 35.0 |
PGSC0003DMT400023077 | Potato | nucleus | 47.33 | 34.33 |
CDY69432 | Canola | nucleus | 36.21 | 31.65 |
CDX67872 | Canola | nucleus | 37.04 | 31.58 |
CDY48008 | Canola | nucleus | 39.09 | 31.25 |
CDY41564 | Canola | nucleus | 37.86 | 30.98 |
CDX80053 | Canola | nucleus | 37.86 | 30.98 |
CDY27515 | Canola | nucleus | 38.68 | 30.92 |
CDX83351 | Canola | nucleus | 38.27 | 30.19 |
CDY50908 | Canola | nucleus | 39.09 | 30.16 |
CDY11388 | Canola | nucleus | 35.8 | 29.79 |
CDX76605 | Canola | nucleus | 35.8 | 29.79 |
CDX97996 | Canola | nucleus | 37.45 | 28.0 |
CDY58763 | Canola | nucleus | 36.63 | 27.99 |
CDY61361 | Canola | nucleus | 37.45 | 27.83 |
CDY58764 | Canola | nucleus | 36.63 | 27.81 |
CDY72302 | Canola | nucleus | 36.63 | 27.3 |
CDY58354 | Canola | nucleus | 36.63 | 27.3 |
CDX90001 | Canola | nucleus | 37.45 | 26.45 |
Os12t0157000-01 | Rice | cytosol, nucleus | 22.63 | 26.19 |
CDY15208 | Canola | nucleus | 34.57 | 26.09 |
CDY40973 | Canola | nucleus | 33.33 | 25.71 |
CDY24391 | Canola | nucleus | 35.39 | 25.44 |
CDX81561 | Canola | nucleus | 34.98 | 24.78 |
CDY45849 | Canola | nucleus, plastid | 35.39 | 24.57 |
CDY36099 | Canola | nucleus | 34.98 | 24.29 |
CDX84999 | Canola | nucleus | 34.98 | 24.01 |
CDX97251 | Canola | nucleus | 33.33 | 23.89 |
CDX99755 | Canola | nucleus | 33.33 | 23.82 |
CDY16133 | Canola | nucleus | 34.57 | 23.46 |
CDY07140 | Canola | nucleus | 29.22 | 23.2 |
CDY49614 | Canola | nucleus | 29.22 | 22.9 |
GSMUA_Achr6P18320_001 | Banana | nucleus | 30.86 | 22.06 |
CDX83547 | Canola | nucleus | 25.93 | 19.44 |
CDY29599 | Canola | nucleus | 25.93 | 19.38 |
CDY65812 | Canola | nucleus | 22.22 | 19.22 |
CDY22814 | Canola | nucleus | 25.1 | 18.1 |
CDY37109 | Canola | nucleus | 24.69 | 18.02 |
CDY37130 | Canola | nucleus | 24.69 | 17.7 |
CDY22826 | Canola | nucleus | 23.87 | 17.16 |
CDY29620 | Canola | nucleus | 24.28 | 17.15 |
CDY51249 | Canola | nucleus | 23.87 | 17.11 |
CDY46564 | Canola | nucleus | 23.87 | 17.11 |
CDY35575 | Canola | nucleus | 23.87 | 16.81 |
CDY25209 | Canola | nucleus | 23.87 | 16.34 |
CDY22801 | Canola | nucleus | 22.63 | 15.8 |
CDY37108 | Canola | nucleus, plastid | 22.22 | 15.74 |
Protein Annotations
MapMan:15.5.5.3 | Gene3D:2.40.330.10 | GO:A0A078I1R3 | UniProt:A0A078I1R3 | InterPro:B3_DNA-bd | EnsemblPlants:CDY43751 |
ProteinID:CDY43751 | ProteinID:CDY43751.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
EnsemblPlantsGene:GSBRNA2T00077247001 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 |
PANTHER:PTHR31140:SF2 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EE31A0 | SEG:seg | : |
Description
BnaAnng07660DBnaAnng07660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1R3]
Coordinates
chrLK032567:+:215364..218260
Molecular Weight (calculated)
28256.6 Da
IEP (calculated)
6.344
GRAVY (calculated)
-0.847
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MSINQYSSEF YYHSLMWQQQ QQHHHQNEVV EEKEALFEKP LTPSDVGKLN RLVIPKQHAE RYFPLAAAAV DAVEKGLLLC FEDEEGKPWR FRYSYWNSSQ
101: SYVLTKGWSR YVKEKQLDAG DVVLFHRHRA DGGRFFIGWR RRGDSSSSSD SYRYLQSNAS LQYYPHAGAQ AVENQRGNSK TLRLFGVNME CQIDSDWSEP
201: STPDGFTTCP TNQDQFPIYP EHYPPPYYMD VSFTGDVHQS QQG
101: SYVLTKGWSR YVKEKQLDAG DVVLFHRHRA DGGRFFIGWR RRGDSSSSSD SYRYLQSNAS LQYYPHAGAQ AVENQRGNSK TLRLFGVNME CQIDSDWSEP
201: STPDGFTTCP TNQDQFPIYP EHYPPPYYMD VSFTGDVHQS QQG
001: MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL NRLVIPKQHA ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS
Arabidopsis Description
ARF31B3 domain-containing protein At2g36080 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.