CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
endoplasmic reticulum 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023446_P001	Maize	nucleus	70.62	79.86
KXG27771	Sorghum	nucleus	61.56	71.9
Os12t0157000-01	Rice	cytosol, nucleus	42.19	64.29
GSMUA_Achr3P19210_001	Banana	nucleus	38.44	61.19
GSMUA_Achr9P02600_001	Banana	nucleus	36.88	61.14
GSMUA_Achr6P35600_001	Banana	nucleus	40.62	53.72
GSMUA_Achr6P13140_001	Banana	nucleus	40.94	53.04
GSMUA_Achr9P08980_001	Banana	nucleus	25.0	49.38
CDY43751	Canola	nucleus	35.0	46.09
AT2G36080.1	Thale cress	nucleus	35.0	45.9
Bra017262.1-P	Field mustard	nucleus	35.0	45.71
CDX84162	Canola	nucleus	34.69	45.68
CDX73868	Canola	nucleus	33.44	45.34
Bra001411.1-P	Field mustard	nucleus	33.44	45.34
CDX75073	Canola	nucleus	35.0	45.16
Bra005301.1-P	Field mustard	nucleus	35.0	45.16
OQU77426	Sorghum	nucleus	22.5	44.72
CDY08512	Canola	nucleus	34.38	44.35
CDY01036	Canola	nucleus	35.31	43.97
GSMUA_Achr11P...	Banana	nucleus	25.31	43.78
Bra034828.1-P	Field mustard	nucleus	34.69	43.02
CDY62470	Canola	nucleus	30.62	42.98
Bra041023.1-P	Field mustard	nucleus	34.38	41.67
VIT_08s0007g02810.t01	Wine grape	nucleus	34.38	38.6
CDY47260	Canola	nucleus	31.88	38.2
Bra005886.1-P	Field mustard	nucleus	31.88	38.2
KXG19112	Sorghum	nucleus	24.38	38.05
AT5G06250.4	Thale cress	nucleus	33.75	38.03
KRG96220	Soybean	nucleus	35.31	37.79
KRH67965	Soybean	nucleus	33.75	37.5
EER92015	Sorghum	nucleus	31.25	36.5
KRH32791	Soybean	nucleus	38.12	36.2
PGSC0003DMT400072354	Potato	nucleus	31.88	35.42
KXG19111	Sorghum	nucleus	26.25	35.29
KRH72242	Soybean	nucleus	37.5	34.88
CDX80996	Canola	nucleus	29.38	34.18
Solyc10g083210.1.1	Tomato	nucleus	32.81	34.09
PGSC0003DMT400023077	Potato	nucleus	35.31	33.73
Solyc09g010230.1.1	Tomato	nucleus	35.94	33.33
OQU93364	Sorghum	nucleus	33.12	32.12
AT3G11580.3	Thale cress	cytosol, endoplasmic reticulum, nucleus	35.94	31.0
EES13386	Sorghum	nucleus	24.38	30.83
CDY70080	Canola	nucleus	21.88	29.29
CDX98911	Canola	nucleus	21.88	29.29
Bra009171.1-P	Field mustard	nucleus	21.88	29.29
GSMUA_Achr6P18320_001	Banana	nucleus	28.75	27.06
EES12712	Sorghum	nucleus	32.5	24.76
EES14747	Sorghum	plastid	21.56	24.73
KXG22484	Sorghum	nucleus, plastid	29.06	22.79
EES07445	Sorghum	nucleus	30.62	22.58
EES03472	Sorghum	nucleus, plastid	28.75	22.28
KXG24821	Sorghum	nucleus	19.38	21.75
EES02511	Sorghum	nucleus	25.31	20.88

Protein Annotations

MapMan:15.5.5.3	Gene3D:2.40.330.10	UniProt:A0A1B6PBE2	InterPro:B3_DNA-bd	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340	InterPro:IPR015300	EnsemblPlants:KXG22988	ProteinID:KXG22988
ProteinID:KXG22988.1	PFAM:PF02362	PFscan:PS50863	PANTHER:PTHR31140	PANTHER:PTHR31140:SF19	SMART:SM01019
EnsemblPlantsGene:SORBI_3008G041100	SUPFAM:SSF101936	UniParc:UPI00081ABB66	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:3974205..3975994

Molecular Weight (calculated)

35315.7 Da

IEP (calculated)

8.719

GRAVY (calculated)

-0.530

Length

320 amino acids

Sequence
(BLAST)

001: MTYACLPLHS TPPLSLPSPR CQSFGKNLSF FLPPLVVSSL LAFLHTTKAG MAMHHLAQGH PQAWPWGMAM YTNLHYHQHH HQYEREHLFE KPLTPSDVGK
101: LNRLVIPKQH AERYFPLGGN GAGDGSDKGL LLAFEDEAGK PWRFRYSYWT SSQSYVLTKG WSRYVKEKRL DAGDVVRFER VRGGLGTGDR LFICCRRRGE
201: SAAPTPTPPL PVRAPAPALN AAGEQQPWSP MCYSTSGSSY PTSPASPYAY HNDTPHAGEA DAKSSGTPTA PSRKLRLFGV NLDCGPEPEP EPETPTAMYS
301: YMHQSPYAAV SAVPSYWGSS

Best Arabidopsis Sequence Match ( AT3G11580.3 )
(BLAST)

001: MSVNHYHNTL SLHHHHQNDV AIAQRESLFE KSLTPSDVGK LNRLVIPKQH AEKYFPLNNN NNNGGSGDDV ATTEKGMLLS FEDESGKCWK FRYSYWNSSQ
101: SYVLTKGWSR YVKDKHLDAG DVVFFQRHRF DLHRLFIGWR RRGEASSSPA VSVVSQEALV NTTAYWSGLT TPYRQVHAST TYPNIHQEYS HYGAVVDHAQ
201: SIPPVVAGSS RTVRLFGVNL ECHGDAVEPP PRPDVYNDQH IYYYSTPHPM VNIFFFYIFV RFKFLLTYDI IIKQMSWLFL ETRQMKISNF KIDLKEIFMF
301: NKLYKGGIRE NNTIHLTVKP HGQFGFYLIT LICFVYSFVS VASFCSLINI SRKYIVSCEN SLYFGFTILI C

Arabidopsis Description

AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LT60]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.