Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024545_P001 | Maize | nucleus | 81.42 | 82.73 |
| Os08t0157700-00 | Rice | nucleus | 60.87 | 53.66 |
| OQU77426 | Sorghum | nucleus | 28.85 | 45.34 |
| KXG19112 | Sorghum | nucleus | 33.2 | 40.98 |
| CDY67348 | Canola | nucleus | 23.72 | 40.0 |
| KXG19111 | Sorghum | nucleus | 36.36 | 38.66 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 27.67 | 33.98 |
| CDY43060 | Canola | cytosol | 21.74 | 33.74 |
| EER92015 | Sorghum | nucleus | 34.39 | 31.75 |
| Solyc08g013700.1.1 | Tomato | nucleus | 35.18 | 30.27 |
| PGSC0003DMT400015010 | Potato | nucleus | 35.18 | 29.67 |
| CDY69432 | Canola | nucleus | 31.23 | 28.42 |
| CDX67872 | Canola | nucleus | 31.62 | 28.07 |
| Bra003482.1-P | Field mustard | nucleus | 31.62 | 27.97 |
| PGSC0003DMT400015011 | Potato | nucleus | 34.39 | 27.8 |
| Bra040478.1-P | Field mustard | nucleus | 32.02 | 27.65 |
| CDX80053 | Canola | nucleus | 32.41 | 27.61 |
| Bra004501.1-P | Field mustard | nucleus | 32.41 | 27.61 |
| CDY41564 | Canola | nucleus | 32.41 | 27.61 |
| Solyc08g013690.1.1 | Tomato | nucleus | 35.18 | 27.47 |
| KXG27771 | Sorghum | nucleus | 29.64 | 27.37 |
| CDY27515 | Canola | nucleus | 32.81 | 27.3 |
| CDY48008 | Canola | nucleus | 32.81 | 27.3 |
| CDX83351 | Canola | nucleus | 33.2 | 27.27 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 24.11 | 27.23 |
| Bra000434.1-P | Field mustard | nucleus | 33.2 | 27.1 |
| AT2G46870.1 | Thale cress | nucleus | 32.81 | 26.77 |
| GSMUA_AchrUn_... | Banana | cytosol | 25.3 | 26.56 |
| AT4G01500.1 | Thale cress | nucleus | 34.78 | 26.43 |
| Bra007646.1-P | Field mustard | nucleus | 30.43 | 26.37 |
| CDY50908 | Canola | nucleus | 32.81 | 26.35 |
| CDY58763 | Canola | nucleus | 32.81 | 26.1 |
| AT3G61970.1 | Thale cress | nucleus | 30.83 | 26.09 |
| CDX76605 | Canola | nucleus | 30.04 | 26.03 |
| CDY11388 | Canola | nucleus | 30.04 | 26.03 |
| CDY58764 | Canola | nucleus | 32.81 | 25.94 |
| Bra014415.1-P | Field mustard | nucleus | 32.81 | 25.94 |
| CDY15208 | Canola | nucleus | 32.81 | 25.78 |
| OQU93364 | Sorghum | nucleus | 33.2 | 25.45 |
| Bra008552.1-P | Field mustard | nucleus | 33.99 | 25.44 |
| CDX97251 | Canola | nucleus | 33.99 | 25.37 |
| CDY07140 | Canola | nucleus | 30.43 | 25.16 |
| CDX90001 | Canola | nucleus | 33.99 | 25.0 |
| CDY49614 | Canola | nucleus | 30.43 | 24.84 |
| Bra037417.1-P | Field mustard | nucleus | 30.43 | 24.84 |
| Bra033294.1-P | Field mustard | nucleus | 33.2 | 24.42 |
| KXG22988 | Sorghum | plastid | 30.83 | 24.38 |
| AT1G01030.1 | Thale cress | nucleus | 34.39 | 24.3 |
| Bra030497.1-P | Field mustard | nucleus | 33.6 | 24.01 |
| Solyc08g083400.2.1 | Tomato | nucleus | 30.04 | 22.75 |
| EES12712 | Sorghum | nucleus | 37.15 | 22.38 |
| PGSC0003DMT400031863 | Potato | nucleus | 33.99 | 21.18 |
| KRG97268 | Soybean | nucleus | 34.39 | 21.07 |
| KRH68988 | Soybean | nucleus | 34.78 | 20.95 |
| EES14747 | Sorghum | plastid | 22.53 | 20.43 |
| EES07445 | Sorghum | nucleus | 34.78 | 20.28 |
| KXG22484 | Sorghum | nucleus, plastid | 32.41 | 20.1 |
| EES02511 | Sorghum | nucleus | 30.43 | 19.85 |
| EES03472 | Sorghum | nucleus, plastid | 31.62 | 19.37 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 34.78 | 19.3 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 34.78 | 19.09 |
| KRH47753 | Soybean | nucleus | 34.39 | 17.4 |
| KXG24821 | Sorghum | nucleus | 18.97 | 16.84 |
| KRH06334 | Soybean | nucleus | 34.39 | 14.95 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | EntrezGene:8069623 | InterPro:B3_DNA-bd | UniProt:C5YHA5 | InterPro:DNA-bd_pseudobarrel_sf |
| EnsemblPlants:EES13386 | ProteinID:EES13386 | ProteinID:EES13386.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF14 |
| SMART:SM01019 | EnsemblPlantsGene:SORBI_3007G047500 | SUPFAM:SSF101936 | unigene:Sbi.21297 | UniParc:UPI0001A87428 | RefSeq:XP_002443891.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:4761522..4763508
Molecular Weight (calculated)
27306.5 Da
IEP (calculated)
4.669
GRAVY (calculated)
-0.474
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MYMDLSLGTL VQDTQEVQEE DQEDNLDQQR AIGQDLHQQG GGGGGEPSHG VEREHMFDKV LTPSDVGKLN RLVVPKQHAE RFFPAAGAGT QLCFQDCGGA
101: LWQFRYSYWG SSQSYVMTKG WSRFVRAARL AAGDTVTFSR GAGGGGRYFI EHRHCQRRRR RDVDISFGDA ATTMPPWPIA VGVQAMNGGA TMAVETASAA
201: IAGTGHDSEV GPSAARSFRL FGFNVECSGD DAPAAPASAE VEYVDVDGDD DYS
101: LWQFRYSYWG SSQSYVMTKG WSRFVRAARL AAGDTVTFSR GAGGGGRYFI EHRHCQRRRR RDVDISFGDA ATTMPPWPIA VGVQAMNGGA TMAVETASAA
201: IAGTGHDSEV GPSAARSFRL FGFNVECSGD DAPAAPASAE VEYVDVDGDD DYS
001: MNISTMNLDQ ELAEIRASSS DHTNYFYSSE RREHMFDKVL TPSDVGKLNR LVIPKQHAEN FFPLEDNQNG TVLDFQDKNG KMWRFRYSYW NSSQSYVMTK
101: GWSRFVKEKK LFAGDTVSFY RGYIPDDNAQ PERRRKIMFI DWRPRAEINF VHNINNHNFV FGSPTYPTAR FYPVTPEYSM PYRSFPPFYQ NQFQEREYLG
201: YGYGRVVNGN GVRYYAGSPL DQHHQWNLGR SEPLVYDSVP VFPAGRVPPS APPQPSTTKK LRLFGVDVEE SSSSGDTRGE MGVAGYSSSS PVVIRDDDQS
301: FWRSPRGEMA SSSSAMQLSD DEEYKRKGKS LEL
101: GWSRFVKEKK LFAGDTVSFY RGYIPDDNAQ PERRRKIMFI DWRPRAEINF VHNINNHNFV FGSPTYPTAR FYPVTPEYSM PYRSFPPFYQ NQFQEREYLG
201: YGYGRVVNGN GVRYYAGSPL DQHHQWNLGR SEPLVYDSVP VFPAGRVPPS APPQPSTTKK LRLFGVDVEE SSSSGDTRGE MGVAGYSSSS PVVIRDDDQS
301: FWRSPRGEMA SSSSAMQLSD DEEYKRKGKS LEL
Arabidopsis Description
NGA4NGA4 [Source:UniProtKB/TrEMBL;Acc:A0A178V2Z9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.