Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83351 | Canola | nucleus | 94.92 | 97.08 |
| CDY48008 | Canola | nucleus | 87.94 | 91.12 |
| CDY27515 | Canola | nucleus | 86.98 | 90.13 |
| CDX80053 | Canola | nucleus | 84.76 | 89.9 |
| CDY41564 | Canola | nucleus | 84.76 | 89.9 |
| AT2G46870.1 | Thale cress | nucleus | 81.9 | 83.23 |
| CDX76605 | Canola | nucleus | 59.37 | 64.04 |
| CDY11388 | Canola | nucleus | 59.37 | 64.04 |
| CDY69432 | Canola | nucleus | 55.87 | 63.31 |
| CDX67872 | Canola | nucleus | 57.14 | 63.16 |
| Zm00001d035982_P001 | Maize | nucleus | 17.14 | 61.36 |
| CDY58763 | Canola | nucleus | 59.37 | 58.8 |
| CDY58764 | Canola | nucleus | 59.68 | 58.75 |
| CDY67348 | Canola | nucleus | 23.49 | 49.33 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 27.62 | 43.94 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 34.6 | 43.78 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 26.98 | 43.59 |
| CDY43060 | Canola | cytosol | 22.54 | 43.56 |
| Zm00001d048815_P001 | Maize | nucleus | 32.06 | 43.53 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 34.29 | 43.2 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 26.67 | 42.86 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 26.35 | 42.35 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 42.54 | 42.01 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 26.67 | 42.0 |
| Os03t0120900-01 | Rice | nucleus | 41.27 | 41.8 |
| Os06t0107800-02 | Rice | nucleus | 26.35 | 41.71 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 41.9 | 41.64 |
| CDX90001 | Canola | nucleus | 45.08 | 41.28 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 28.25 | 41.01 |
| CDY15208 | Canola | nucleus | 41.9 | 40.99 |
| Zm00001d010077_P001 | Maize | nucleus | 33.65 | 40.93 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 27.62 | 40.47 |
| Zm00001d029749_P001 | Maize | nucleus | 34.92 | 40.29 |
| EER92015 | Sorghum | nucleus | 34.92 | 40.15 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 27.62 | 40.09 |
| Zm00001d047359_P001 | Maize | nucleus | 35.24 | 40.07 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 34.92 | 40.0 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 34.92 | 39.57 |
| OQU93364 | Sorghum | nucleus | 41.27 | 39.39 |
| Zm00001d035903_P001 | Maize | nucleus | 27.94 | 39.29 |
| Zm00001d027409_P001 | Maize | nucleus | 40.63 | 39.14 |
| CDY43751 | Canola | nucleus | 30.16 | 39.09 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 27.3 | 39.09 |
| KXG19112 | Sorghum | nucleus | 25.4 | 39.02 |
| CDX73868 | Canola | nucleus | 29.21 | 38.98 |
| Zm00001d024103_P001 | Maize | nucleus | 27.62 | 38.84 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 25.71 | 38.39 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 25.08 | 38.35 |
| CDX84162 | Canola | nucleus | 29.52 | 38.27 |
| Os10t0537100-00 | Rice | nucleus | 37.78 | 38.14 |
| CDY08512 | Canola | nucleus | 29.84 | 37.9 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 40.95 | 37.83 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 34.92 | 37.8 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 32.7 | 37.59 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 39.37 | 37.58 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 34.92 | 37.54 |
| CDX75073 | Canola | nucleus | 29.52 | 37.5 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 26.67 | 37.5 |
| CDY62470 | Canola | nucleus | 26.98 | 37.28 |
| Os04t0581400-01 | Rice | nucleus | 34.29 | 36.86 |
| CDY01036 | Canola | nucleus | 29.21 | 35.8 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 26.67 | 35.74 |
| KRG97268 | Soybean | nucleus | 46.67 | 35.59 |
| CDY47260 | Canola | nucleus | 30.16 | 35.58 |
| KRH68988 | Soybean | nucleus | 47.3 | 35.48 |
| KXG19111 | Sorghum | nucleus | 26.67 | 35.29 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 45.71 | 35.21 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 30.16 | 34.93 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 51.11 | 34.92 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 44.76 | 34.9 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.67 | 34.85 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 31.43 | 34.62 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 44.76 | 34.47 |
| Os02t0683500-01 | Rice | nucleus | 44.44 | 33.98 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 32.7 | 33.88 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 30.79 | 33.68 |
| Zm00001d002562_P001 | Maize | nucleus | 43.49 | 33.5 |
| Zm00001d026005_P001 | Maize | nucleus | 42.86 | 33.42 |
| Zm00001d051471_P001 | Maize | nucleus | 44.44 | 33.33 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 43.17 | 33.25 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 43.49 | 33.09 |
| Zm00001d024545_P001 | Maize | nucleus | 26.03 | 32.93 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 43.17 | 32.85 |
| EES13386 | Sorghum | nucleus | 26.35 | 32.81 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 42.54 | 32.76 |
| EES07445 | Sorghum | nucleus | 44.76 | 32.49 |
| Zm00001d017618_P001 | Maize | nucleus | 43.49 | 32.46 |
| EES12712 | Sorghum | nucleus | 43.17 | 32.38 |
| Os08t0157700-00 | Rice | nucleus | 28.25 | 31.01 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 44.13 | 30.48 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 32.38 | 30.27 |
| CDX80996 | Canola | nucleus | 26.35 | 30.18 |
| KRH47753 | Soybean | nucleus | 47.62 | 30.0 |
| CDX97251 | Canola | nucleus | 31.75 | 29.5 |
| CDY07140 | Canola | nucleus | 27.62 | 28.43 |
| CDY49614 | Canola | nucleus | 27.3 | 27.74 |
| CDX81561 | Canola | nucleus | 29.84 | 27.41 |
| CDX97996 | Canola | nucleus | 27.94 | 27.08 |
| CDY58354 | Canola | nucleus | 27.94 | 26.99 |
| CDY72302 | Canola | nucleus | 27.94 | 26.99 |
| CDY61361 | Canola | nucleus | 27.94 | 26.91 |
| CDY45849 | Canola | nucleus, plastid | 29.84 | 26.86 |
| CDX98911 | Canola | nucleus | 20.32 | 26.78 |
| CDY70080 | Canola | nucleus | 20.32 | 26.78 |
| KRH06334 | Soybean | nucleus | 47.62 | 25.77 |
| CDY24391 | Canola | nucleus | 27.3 | 25.44 |
| CDY40973 | Canola | nucleus | 25.4 | 25.4 |
| CDY36099 | Canola | nucleus | 27.94 | 25.14 |
| CDX84999 | Canola | nucleus | 27.3 | 24.29 |
| CDX99755 | Canola | nucleus | 26.03 | 24.12 |
| CDY16133 | Canola | nucleus | 27.3 | 24.02 |
| CDX83547 | Canola | nucleus | 20.0 | 19.44 |
| CDY37109 | Canola | nucleus | 19.05 | 18.02 |
| CDY29599 | Canola | nucleus | 18.1 | 17.54 |
| CDY46564 | Canola | nucleus | 18.41 | 17.11 |
| CDY51249 | Canola | nucleus | 18.41 | 17.11 |
| CDY65812 | Canola | nucleus | 15.24 | 17.08 |
| CDY22814 | Canola | nucleus | 18.1 | 16.91 |
| CDY29620 | Canola | nucleus | 18.41 | 16.86 |
| CDY35575 | Canola | nucleus | 18.41 | 16.81 |
| CDY22826 | Canola | nucleus | 17.78 | 16.57 |
| CDY37130 | Canola | nucleus | 17.78 | 16.52 |
| CDY25209 | Canola | nucleus | 17.78 | 15.77 |
| CDY22801 | Canola | nucleus | 16.83 | 15.23 |
| CDY37108 | Canola | nucleus, plastid | 16.19 | 14.87 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | GO:A0A078IPA9 | UniProt:A0A078IPA9 | InterPro:B3_DNA-bd | EnsemblPlants:CDY50908 |
| ProteinID:CDY50908 | ProteinID:CDY50908.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00097754001 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF38 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EE135E | SEG:seg | : |
Description
BnaC03g72370DBnaC03g72370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPA9]
Coordinates
chrLK032948:+:4611..5922
Molecular Weight (calculated)
35585.5 Da
IEP (calculated)
6.252
GRAVY (calculated)
-0.720
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTNLSLARE GEGEEEEEEE EEAEAKKPTE EVEREHMFDK VVTPSDVGKL NRLVIPKQHA ERYFPLDSSS NEKGLLLNFE DLTGKSWRFR YSYWNSSQSY
101: VMTKGWSRFV KDKKLDAGDI VSFLRCVGDT ERDSRLFIDW RRRPKVPDYP TSTSHFPAGA MFPRFYSFPT ATTSTSYNLY NHQQPRHHHS GYCYPQIPRE
201: FGYGYVVRSV DQRAVVADPL VIESVPVMMH GGARMNQAAV GTAGKRLRLF GVDMECGESG VTNSTEEESS SSGGSLPRGG ASPSSSMFQL RLGNSSEDDH
301: LFKKGKSSLP FNLDQ
101: VMTKGWSRFV KDKKLDAGDI VSFLRCVGDT ERDSRLFIDW RRRPKVPDYP TSTSHFPAGA MFPRFYSFPT ATTSTSYNLY NHQQPRHHHS GYCYPQIPRE
201: FGYGYVVRSV DQRAVVADPL VIESVPVMMH GGARMNQAAV GTAGKRLRLF GVDMECGESG VTNSTEEESS SSGGSLPRGG ASPSSSMFQL RLGNSSEDDH
301: LFKKGKSSLP FNLDQ
001: MMTDLSLTRD EDEEEAKPLA EEEGAREVAD REHMFDKVVT PSDVGKLNRL VIPKQHAERF FPLDSSSNEK GLLLNFEDLT GKSWRFRYSY WNSSQSYVMT
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
Arabidopsis Description
NGA1B3 domain-containing transcription factor NGA1 [Source:UniProtKB/Swiss-Prot;Acc:O82799]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.