Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92015 | Sorghum | nucleus | 93.14 | 94.16 |
| Zm00001d029749_P001 | Maize | nucleus | 89.17 | 90.48 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 66.43 | 66.91 |
| Os10t0537100-00 | Rice | nucleus | 74.37 | 66.03 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 65.34 | 65.11 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 67.15 | 63.92 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 67.51 | 63.82 |
| Zm00001d035982_P001 | Maize | nucleus | 19.86 | 62.5 |
| Zm00001d048815_P001 | Maize | nucleus | 42.6 | 50.86 |
| Zm00001d010077_P001 | Maize | nucleus | 45.85 | 49.03 |
| Zm00001d027409_P001 | Maize | nucleus | 54.87 | 46.48 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 40.79 | 45.38 |
| CDY67348 | Canola | nucleus | 24.55 | 45.33 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 40.79 | 45.2 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 34.3 | 45.02 |
| Zm00001d035903_P001 | Maize | nucleus | 34.66 | 42.86 |
| Zm00001d024103_P001 | Maize | nucleus | 33.94 | 41.96 |
| CDY43060 | Canola | cytosol | 23.83 | 40.49 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 33.21 | 39.15 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 46.57 | 39.09 |
| Solyc08g013700.1.1 | Tomato | nucleus | 41.16 | 38.78 |
| Bra040478.1-P | Field mustard | nucleus | 40.07 | 37.88 |
| CDY69432 | Canola | nucleus | 37.55 | 37.41 |
| CDX80053 | Canola | nucleus | 40.07 | 37.37 |
| Bra004501.1-P | Field mustard | nucleus | 40.07 | 37.37 |
| CDX67872 | Canola | nucleus | 38.27 | 37.19 |
| Bra003482.1-P | Field mustard | nucleus | 38.27 | 37.06 |
| PGSC0003DMT400015011 | Potato | nucleus | 41.88 | 37.06 |
| CDY41564 | Canola | nucleus | 39.71 | 37.04 |
| PGSC0003DMT400015010 | Potato | nucleus | 40.07 | 37.0 |
| CDY48008 | Canola | nucleus | 40.43 | 36.84 |
| CDY27515 | Canola | nucleus | 40.43 | 36.84 |
| Solyc08g013690.1.1 | Tomato | nucleus | 42.96 | 36.73 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 37.18 | 36.01 |
| CDX83351 | Canola | nucleus | 39.71 | 35.71 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 35.02 | 35.66 |
| Bra007646.1-P | Field mustard | nucleus | 37.55 | 35.62 |
| CDY11388 | Canola | nucleus | 37.55 | 35.62 |
| CDX76605 | Canola | nucleus | 37.55 | 35.62 |
| Bra000434.1-P | Field mustard | nucleus | 39.71 | 35.48 |
| AT3G61970.1 | Thale cress | nucleus | 38.27 | 35.45 |
| CDY50908 | Canola | nucleus | 40.07 | 35.24 |
| Zm00001d002562_P001 | Maize | nucleus | 51.99 | 35.21 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 38.63 | 35.2 |
| AT2G46870.1 | Thale cress | nucleus | 39.35 | 35.16 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 36.1 | 34.72 |
| Zm00001d026005_P001 | Maize | nucleus | 50.54 | 34.65 |
| Zm00001d024545_P001 | Maize | nucleus | 30.69 | 34.14 |
| Zm00001d023446_P001 | Maize | nucleus | 34.66 | 33.92 |
| CDY58763 | Canola | nucleus | 38.63 | 33.65 |
| Bra014415.1-P | Field mustard | nucleus | 38.63 | 33.44 |
| CDY58764 | Canola | nucleus | 38.63 | 33.44 |
| CDX90001 | Canola | nucleus | 41.52 | 33.43 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 40.43 | 33.23 |
| Zm00001d017618_P001 | Maize | nucleus | 50.54 | 33.18 |
| Bra033294.1-P | Field mustard | nucleus | 40.79 | 32.85 |
| CDY15208 | Canola | nucleus | 37.91 | 32.61 |
| Zm00001d051471_P001 | Maize | nucleus | 49.1 | 32.38 |
| Bra030497.1-P | Field mustard | nucleus | 41.16 | 32.2 |
| AT1G01030.1 | Thale cress | nucleus | 41.52 | 32.12 |
| Solyc08g083400.2.1 | Tomato | nucleus | 38.63 | 32.04 |
| Zm00001d052591_P001 | Maize | nucleus | 34.3 | 30.94 |
| PGSC0003DMT400031863 | Potato | nucleus | 44.4 | 30.3 |
| KRG97268 | Soybean | nucleus | 43.68 | 29.3 |
| KRH68988 | Soybean | nucleus | 43.68 | 28.81 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 45.13 | 27.41 |
| AT4G01500.1 | Thale cress | nucleus | 32.49 | 27.03 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 44.77 | 26.9 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 27.08 | 26.32 |
| CDX97251 | Canola | nucleus | 30.69 | 25.07 |
| Bra008552.1-P | Field mustard | nucleus | 30.32 | 24.85 |
| Zm00001d009468_P001 | Maize | nucleus, plastid | 33.57 | 24.8 |
| KRH47753 | Soybean | nucleus | 44.4 | 24.6 |
| CDY07140 | Canola | nucleus | 27.08 | 24.51 |
| Bra037417.1-P | Field mustard | nucleus | 27.08 | 24.19 |
| CDY49614 | Canola | nucleus | 27.08 | 24.19 |
| Zm00001d038907_P001 | Maize | nucleus, plastid | 34.3 | 23.4 |
| Zm00001d043782_P001 | Maize | nucleus | 32.85 | 23.39 |
| Zm00001d011639_P001 | Maize | nucleus | 33.94 | 23.21 |
| Zm00001d039907_P001 | Maize | nucleus | 28.88 | 21.16 |
| KRH06334 | Soybean | nucleus | 44.4 | 21.13 |
Protein Annotations
| EntrezGene:103639087 | MapMan:15.5.5.3 | Gene3D:2.40.330.10 | ProteinID:AIB04457.1 | ProteinID:AQL06238.1 | InterPro:B3_DNA-bd |
| InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 |
| UniProt:K7WD32 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF8 | SMART:SM01019 |
| SUPFAM:SSF101936 | UniParc:UPI000221E95C | EnsemblPlantsGene:Zm00001d047359 | EnsemblPlants:Zm00001d047359_P001 | EnsemblPlants:Zm00001d047359_T001 | SEG:seg |
Description
ABI3-VP1-transcription factor 38B3 domain-containing transcription factor NGA2
Coordinates
chr9:-:127613899..127614732
Molecular Weight (calculated)
29873.7 Da
IEP (calculated)
10.415
GRAVY (calculated)
-0.155
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTPAHAHA RVVEDSERPR GGVAWVEKEH MFEKVVTPSD VGKLNRLVIP KQHAERYFPA LDASSAAAAA AAAAAGGGKG LVLSFEDRAG KAWRFRYSYW
101: NSSQSYVMTK GWSRFVKEKR LGAGDTVLFA RGAGGARGRF FIDFRRRRQD LAFLQPTLAS AQRLLPLPSV PICPWQDYGA SAPAPNRHVL FLRPQVPAAV
201: VLKSVPVHVA ASAVEATMSK RVRLFGVNLD CPPDAEDSAT VPRGRAASTT LLQLPSPSSS TSSSTAGKDV CCLDLGL
101: NSSQSYVMTK GWSRFVKEKR LGAGDTVLFA RGAGGARGRF FIDFRRRRQD LAFLQPTLAS AQRLLPLPSV PICPWQDYGA SAPAPNRHVL FLRPQVPAAV
201: VLKSVPVHVA ASAVEATMSK RVRLFGVNLD CPPDAEDSAT VPRGRAASTT LLQLPSPSSS TSSSTAGKDV CCLDLGL
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.