Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d035982_P001 | Maize | nucleus | 16.36 | 61.36 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 42.73 | 60.0 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 47.27 | 57.35 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 35.76 | 55.92 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 42.12 | 55.6 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 41.82 | 55.42 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 46.97 | 54.2 |
| EER92015 | Sorghum | nucleus | 40.0 | 48.18 |
| Os03t0120900-01 | Rice | nucleus | 45.15 | 47.91 |
| CDY67348 | Canola | nucleus | 21.52 | 47.33 |
| Zm00001d029749_P001 | Maize | nucleus | 38.79 | 46.89 |
| Zm00001d047359_P001 | Maize | nucleus | 39.09 | 46.57 |
| Zm00001d010077_P001 | Maize | nucleus | 36.06 | 45.95 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 38.18 | 45.82 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 27.88 | 45.77 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 44.24 | 45.77 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 43.94 | 45.74 |
| Zm00001d048815_P001 | Maize | nucleus | 32.12 | 45.69 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 38.48 | 45.68 |
| Os10t0537100-00 | Rice | nucleus | 42.73 | 45.19 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 38.79 | 44.44 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 39.39 | 44.37 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 39.09 | 44.33 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 25.76 | 44.04 |
| OQU93364 | Sorghum | nucleus | 43.94 | 43.94 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 40.3 | 43.75 |
| Zm00001d027409_P001 | Maize | nucleus | 43.03 | 43.43 |
| Bra040478.1-P | Field mustard | nucleus | 36.97 | 41.64 |
| Os04t0581400-01 | Rice | nucleus | 36.97 | 41.64 |
| CDY41564 | Canola | nucleus | 37.27 | 41.41 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 20.3 | 41.36 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 42.73 | 41.35 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 34.24 | 41.24 |
| Solyc08g013700.1.1 | Tomato | nucleus | 36.67 | 41.16 |
| CDY43060 | Canola | cytosol | 20.3 | 41.1 |
| Bra004501.1-P | Field mustard | nucleus | 36.97 | 41.08 |
| CDX80053 | Canola | nucleus | 36.97 | 41.08 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 29.7 | 40.5 |
| CDY48008 | Canola | nucleus | 37.27 | 40.46 |
| Bra007646.1-P | Field mustard | nucleus | 35.76 | 40.41 |
| CDX67872 | Canola | nucleus | 34.85 | 40.35 |
| Bra003482.1-P | Field mustard | nucleus | 34.85 | 40.21 |
| CDY27515 | Canola | nucleus | 36.97 | 40.13 |
| CDX76605 | Canola | nucleus | 35.45 | 40.07 |
| CDY11388 | Canola | nucleus | 35.45 | 40.07 |
| AT2G46870.1 | Thale cress | nucleus | 37.27 | 39.68 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 49.39 | 39.37 |
| CDY50908 | Canola | nucleus | 37.58 | 39.37 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 48.79 | 39.36 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 48.79 | 39.36 |
| PGSC0003DMT400015010 | Potato | nucleus | 35.76 | 39.33 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 24.55 | 39.32 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 29.39 | 39.27 |
| CDY69432 | Canola | nucleus | 33.03 | 39.21 |
| PGSC0003DMT400015011 | Potato | nucleus | 36.97 | 38.98 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 48.79 | 38.89 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 48.18 | 38.88 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 47.58 | 38.86 |
| AT3G61970.1 | Thale cress | nucleus | 35.15 | 38.8 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 47.88 | 38.63 |
| Os02t0683500-01 | Rice | nucleus | 48.18 | 38.59 |
| Solyc08g013690.1.1 | Tomato | nucleus | 37.88 | 38.58 |
| Bra000434.1-P | Field mustard | nucleus | 36.06 | 38.39 |
| Zm00001d002562_P001 | Maize | nucleus | 47.58 | 38.39 |
| CDX83351 | Canola | nucleus | 35.76 | 38.31 |
| EES12712 | Sorghum | nucleus | 48.18 | 37.86 |
| CDY58763 | Canola | nucleus | 36.36 | 37.74 |
| Bra014415.1-P | Field mustard | nucleus | 36.36 | 37.5 |
| CDY58764 | Canola | nucleus | 36.36 | 37.5 |
| GSMUA_Achr11P... | Banana | nucleus | 20.91 | 37.3 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.97 | 36.93 |
| Zm00001d026005_P001 | Maize | nucleus | 45.15 | 36.88 |
| Solyc08g083400.2.1 | Tomato | nucleus | 37.27 | 36.83 |
| Zm00001d017618_P001 | Maize | nucleus | 46.67 | 36.49 |
| CDX90001 | Canola | nucleus | 37.88 | 36.34 |
| CDY15208 | Canola | nucleus | 35.45 | 36.34 |
| Bra033294.1-P | Field mustard | nucleus | 37.27 | 35.76 |
| Zm00001d051471_P001 | Maize | nucleus | 45.45 | 35.71 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 36.36 | 35.61 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 23.94 | 35.27 |
| EES07445 | Sorghum | nucleus | 46.06 | 35.02 |
| PGSC0003DMT400031863 | Potato | nucleus | 43.03 | 34.98 |
| AT1G01030.1 | Thale cress | nucleus | 37.88 | 34.92 |
| Bra030497.1-P | Field mustard | nucleus | 37.27 | 34.75 |
| GSMUA_Achr5P09950_001 | Banana | nucleus | 31.82 | 32.61 |
| GSMUA_Achr6P01420_001 | Banana | nucleus | 30.91 | 32.28 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 44.85 | 32.1 |
| GSMUA_Achr1P21250_001 | Banana | nucleus | 28.48 | 31.97 |
| KRG97268 | Soybean | nucleus | 40.0 | 31.96 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 43.94 | 31.8 |
| KRH68988 | Soybean | nucleus | 40.3 | 31.67 |
| GSMUA_Achr1P05400_001 | Banana | nucleus | 27.88 | 30.87 |
| GSMUA_Achr2P22560_001 | Banana | nucleus | 26.06 | 27.74 |
| AT4G01500.1 | Thale cress | nucleus | 27.88 | 27.63 |
| KRH47753 | Soybean | nucleus | 41.21 | 27.2 |
| CDX97251 | Canola | nucleus | 27.88 | 27.14 |
| Bra008552.1-P | Field mustard | nucleus | 27.58 | 26.92 |
| CDY07140 | Canola | nucleus | 24.85 | 26.8 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.3 | 26.74 |
| Bra037417.1-P | Field mustard | nucleus | 24.85 | 26.45 |
| CDY49614 | Canola | nucleus | 24.85 | 26.45 |
| KRH06334 | Soybean | nucleus | 45.15 | 25.6 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 25.45 | 24.71 |
| GSMUA_Achr4P06710_001 | Banana | nucleus | 26.06 | 24.57 |
| GSMUA_Achr6P09880_001 | Banana | nucleus | 21.52 | 24.57 |
| GSMUA_Achr4P03670_001 | Banana | nucleus | 21.21 | 23.81 |
| GSMUA_Achr10P... | Banana | nucleus | 20.61 | 23.29 |
| GSMUA_Achr3P29380_001 | Banana | nucleus | 18.18 | 22.81 |
| GSMUA_Achr9P21470_001 | Banana | nucleus | 20.91 | 22.26 |
| GSMUA_Achr3P21100_001 | Banana | nucleus | 26.67 | 21.36 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 21.82 | 17.39 |
| GSMUA_Achr11P... | Banana | nucleus | 16.06 | 15.77 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr1G03600_001 | EnsemblPlants:GSMUA_Achr1P03600_001 | EnsemblPlants:GSMUA_Achr1T03600_001 | InterPro:IPR003340 | InterPro:IPR015300 |
| UniProt:M0RWR8 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | SMART:SM01019 |
| SUPFAM:SSF101936 | UniParc:UPI0002954838 | SEG:seg | : | : | : |
Description
B3 domain-containing protein Os03g0120900 [Source:GMGC_GENE;Acc:GSMUA_Achr1G03600_001]
Coordinates
chr1:+:2972671..2973729
Molecular Weight (calculated)
36088.9 Da
IEP (calculated)
8.468
GRAVY (calculated)
-0.588
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTARRSDG FYMTEEEKHE EASQHPSFIP LSSSSSSPST SAAFGWHVGP SDTAGNGAAG DSGNESNFFT EKEHMFDKVV TPSDVGKLNR LVIPKQHAER
101: HFPLDPTANE KGMLLSFDDR TGKSWRFRYS YWNSSQSYVM TKGWSRFVKE KRLDAGDVVS FGRGVGESGR DHLYIDWKRR QENHDLPRAP RAPLTGVSMA
201: RPLGPWGVSR FFIPPAAIYD HHRPGFGYSP MSSGTSSGGQ FLFVGSTSAG PPQFGAQASA KRVRLFGVNL DCPESKGNAQ LPSGLSSASA PQLQSSSTLQ
301: FLPLPHGRTE SSVAPSSTIT DHRLSLDLDL
101: HFPLDPTANE KGMLLSFDDR TGKSWRFRYS YWNSSQSYVM TKGWSRFVKE KRLDAGDVVS FGRGVGESGR DHLYIDWKRR QENHDLPRAP RAPLTGVSMA
201: RPLGPWGVSR FFIPPAAIYD HHRPGFGYSP MSSGTSSGGQ FLFVGSTSAG PPQFGAQASA KRVRLFGVNL DCPESKGNAQ LPSGLSSASA PQLQSSSTLQ
301: FLPLPHGRTE SSVAPSSTIT DHRLSLDLDL
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFEYNSVPIH RGLNIGNHQR SYYNTQRQEF
201: VGYGYGNLAG RCYYTGSPLD HRNIVGSEPL VIDSVPVVPG RLTPVMLPPL PPPPSTAGKR LRLFGVNMEC GNDYNQQEES WLVPRGEIGA SSSSSSALRL
301: NLSTDHDDDN DDGDDGDDDQ FAKKGKSSLS LNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFEYNSVPIH RGLNIGNHQR SYYNTQRQEF
201: VGYGYGNLAG RCYYTGSPLD HRNIVGSEPL VIDSVPVVPG RLTPVMLPPL PPPPSTAGKR LRLFGVNMEC GNDYNQQEES WLVPRGEIGA SSSSSSALRL
301: NLSTDHDDDN DDGDDGDDDQ FAKKGKSSLS LNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.