Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G286900.1 | Wheat | nucleus | 77.91 | 78.48 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 78.64 | 78.26 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 78.4 | 78.02 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 76.94 | 77.51 |
| Os04t0581400-01 | Rice | nucleus | 44.66 | 62.8 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 32.52 | 53.82 |
| Os03t0120900-01 | Rice | nucleus | 40.53 | 53.7 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 32.28 | 53.2 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 26.21 | 51.18 |
| Os10t0537100-00 | Rice | nucleus | 37.86 | 50.0 |
| Os06t0107800-02 | Rice | nucleus | 23.54 | 48.74 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 38.59 | 48.18 |
| CDY67348 | Canola | nucleus | 17.48 | 48.0 |
| Bra004501.1-P | Field mustard | nucleus | 34.47 | 47.81 |
| CDX80053 | Canola | nucleus | 34.47 | 47.81 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 26.94 | 47.23 |
| CDY41564 | Canola | nucleus | 33.98 | 47.14 |
| Bra040478.1-P | Field mustard | nucleus | 33.01 | 46.42 |
| CDY48008 | Canola | nucleus | 33.5 | 45.39 |
| Solyc08g013700.1.1 | Tomato | nucleus | 32.28 | 45.24 |
| Bra003482.1-P | Field mustard | nucleus | 31.31 | 45.1 |
| CDX67872 | Canola | nucleus | 31.07 | 44.91 |
| CDY27515 | Canola | nucleus | 33.01 | 44.74 |
| CDY69432 | Canola | nucleus | 30.1 | 44.6 |
| AT2G46870.1 | Thale cress | nucleus | 33.5 | 44.52 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 29.37 | 44.49 |
| CDY50908 | Canola | nucleus | 33.98 | 44.44 |
| PGSC0003DMT400015010 | Potato | nucleus | 32.04 | 44.0 |
| Bra000434.1-P | Field mustard | nucleus | 33.01 | 43.87 |
| CDX83351 | Canola | nucleus | 32.52 | 43.51 |
| Solyc08g013690.1.1 | Tomato | nucleus | 33.98 | 43.21 |
| PGSC0003DMT400015011 | Potato | nucleus | 32.77 | 43.13 |
| AT3G61970.1 | Thale cress | nucleus | 31.07 | 42.81 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 31.55 | 42.76 |
| Solyc08g083400.2.1 | Tomato | nucleus | 34.47 | 42.52 |
| Bra007646.1-P | Field mustard | nucleus | 30.1 | 42.47 |
| CDX76605 | Canola | nucleus | 30.1 | 42.47 |
| CDY11388 | Canola | nucleus | 30.1 | 42.47 |
| CDY43060 | Canola | cytosol | 16.75 | 42.33 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 29.13 | 41.96 |
| CDY58763 | Canola | nucleus | 32.04 | 41.51 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 28.88 | 41.32 |
| CDY58764 | Canola | nucleus | 31.8 | 40.94 |
| Bra014415.1-P | Field mustard | nucleus | 31.8 | 40.94 |
| CDX90001 | Canola | nucleus | 32.77 | 39.24 |
| KRG97268 | Soybean | nucleus | 39.32 | 39.23 |
| CDY15208 | Canola | nucleus | 30.34 | 38.82 |
| KRH68988 | Soybean | nucleus | 39.56 | 38.81 |
| Bra033294.1-P | Field mustard | nucleus | 32.28 | 38.66 |
| PGSC0003DMT400031863 | Potato | nucleus | 37.38 | 37.93 |
| AT1G01030.1 | Thale cress | nucleus | 32.28 | 37.15 |
| Bra030497.1-P | Field mustard | nucleus | 31.55 | 36.72 |
| Os11t0156000-01 | Rice | nucleus | 24.76 | 36.56 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 29.85 | 36.5 |
| KRH47753 | Soybean | nucleus | 43.69 | 36.0 |
| Os08t0157700-00 | Rice | nucleus | 23.79 | 34.15 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 37.38 | 33.41 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 35.92 | 32.46 |
| KRH06334 | Soybean | nucleus | 43.93 | 31.1 |
| Os05t0549800-01 | Rice | nucleus | 25.73 | 30.9 |
| Os01t0140700-00 | Rice | nucleus | 23.06 | 29.97 |
| AT4G01500.1 | Thale cress | nucleus | 24.03 | 29.73 |
| CDX97251 | Canola | nucleus | 23.3 | 28.32 |
| Bra008552.1-P | Field mustard | nucleus | 23.06 | 28.11 |
| Os01t0693400-01 | Rice | nucleus | 26.21 | 27.48 |
| Os01t0141000-01 | Rice | nucleus, plastid | 23.79 | 26.85 |
| CDY07140 | Canola | nucleus | 19.66 | 26.47 |
| Bra037417.1-P | Field mustard | nucleus | 19.66 | 26.13 |
| CDY49614 | Canola | nucleus | 19.66 | 26.13 |
| Os02t0764100-01 | Rice | mitochondrion | 15.53 | 25.3 |
| Os02t0455900-00 | Rice | nucleus | 16.5 | 25.0 |
| Os02t0455800-01 | Rice | nucleus | 16.02 | 24.72 |
| Os12t0157000-01 | Rice | cytosol, nucleus | 12.14 | 23.81 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | EntrezGene:4330337 | EMBL:AK109908 | InterPro:B3_DNA-bd | ProteinID:BAD27840.1 |
| ProteinID:BAF09668.1 | ProteinID:BAS80313.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003340 | InterPro:IPR015300 | EnsemblPlantsGene:Os02g0683500 | EnsemblPlants:Os02t0683500-01 | PFAM:PF02362 | PFscan:PS50863 |
| PANTHER:PTHR31140 | PANTHER:PTHR31140:SF39 | UniProt:Q6EU30 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI00003CE51F |
| RefSeq:XP_015624169.1 | SEG:seg | : | : | : | : |
Description
Related to ABI3/VP1, RELATED TO ABSCISIC ACID INSENSITIVE3 (ABI3)/VIVIPAROUS1 (VP1) 6B3 DNA-binding domain-containing protein, Brassinosteroid (BR) homeostasis (Os02t0683500-01)
Coordinates
chr2:-:27932831..27934689
Molecular Weight (calculated)
43950.2 Da
IEP (calculated)
8.131
GRAVY (calculated)
-0.524
Length
412 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTTSSRFS KEEEDEEQDE AGRREIPFMT ATAEAAPAPT SSSSSPAHHA ASASASASAS GSSTPFRSDD GAGASGSGGG GGGGGEAEVV EKEHMFDKVV
101: TPSDVGKLNR LVIPKQYAEK YFPLDAAANE KGLLLNFEDR AGKPWRFRYS YWNSSQSYVM TKGWSRFVKE KRLDAGDTVS FSRGIGDEAA RHRLFIDWKR
201: RADTRDPLRL PRGLPLPMPL TSHYAPWGIG GGGGFFVQPS PPATLYEHRL RQGLDFRAFN PAAAMGRQVL LFGSARIPPQ APLLARAPSP LHHHYTLQPS
301: GDGVRAAGSP VVLDSVPVIE SPTTAAKRVR LFGVNLDNPH AGGGGGAAAG ESSNHGNALS LQTPAWMRRD PTLRLLELPP HHHHGAESSA ASSPSSSSSS
401: KRDAHSALDL DL
101: TPSDVGKLNR LVIPKQYAEK YFPLDAAANE KGLLLNFEDR AGKPWRFRYS YWNSSQSYVM TKGWSRFVKE KRLDAGDTVS FSRGIGDEAA RHRLFIDWKR
201: RADTRDPLRL PRGLPLPMPL TSHYAPWGIG GGGGFFVQPS PPATLYEHRL RQGLDFRAFN PAAAMGRQVL LFGSARIPPQ APLLARAPSP LHHHYTLQPS
301: GDGVRAAGSP VVLDSVPVIE SPTTAAKRVR LFGVNLDNPH AGGGGGAAAG ESSNHGNALS LQTPAWMRRD PTLRLLELPP HHHHGAESSA ASSPSSSSSS
401: KRDAHSALDL DL
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.