Skip to main content
crop-pal logo
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P24970_001 Banana nucleus 60.84 74.04
GSMUA_Achr5P10220_001 Banana nucleus 65.38 68.75
GSMUA_Achr5P12850_001 Banana nucleus 42.66 57.82
GSMUA_Achr2P00400_001 Banana nucleus 50.0 49.65
GSMUA_Achr2P10230_001 Banana nucleus 52.45 49.34
GSMUA_Achr4P30170_001 Banana nucleus 42.31 48.59
GSMUA_Achr4P26430_001 Banana nucleus 41.26 47.2
GSMUA_Achr1P03600_001 Banana nucleus 54.2 46.97
GSMUA_Achr7P04630_001 Banana nucleus 27.97 38.84
Zm00001d029749_P001 Maize nucleus 36.71 38.46
CDY67348 Canola nucleus 19.93 38.0
EER92015 Sorghum nucleus 36.36 37.96
Zm00001d047359_P001 Maize nucleus 36.01 37.18
GSMUA_Achr9P08980_001 Banana nucleus 20.63 36.42
GSMUA_AchrUn_... Banana cytosol 30.42 36.1
GSMUA_Achr11P... Banana nucleus 23.08 35.68
Os03t0120900-01 Rice nucleus 37.41 34.41
CDY43060 Canola cytosol 19.58 34.36
GSMUA_Achr3P19210_001 Banana nucleus 24.13 34.33
TraesCS1A01G200500.1 Wheat nucleus 33.22 34.17
Zm00001d010077_P001 Maize nucleus 30.77 33.98
Os10t0537100-00 Rice nucleus 37.06 33.97
TraesCS4B01G348500.1 Wheat nucleus 37.76 33.86
TraesCS1B01G215000.1 Wheat nucleus 32.52 33.82
Bra040478.1-P Field mustard nucleus 34.62 33.79
TraesCS5A01G516600.1 Wheat nucleus 37.41 33.75
CDY27515 Canola nucleus 35.31 33.22
Zm00001d048815_P001 Maize nucleus 26.92 33.19
Bra004501.1-P Field mustard nucleus 34.27 33.0
CDX80053 Canola nucleus 34.27 33.0
CDY48008 Canola nucleus 34.97 32.89
CDY41564 Canola nucleus 33.92 32.66
GSMUA_Achr9P02600_001 Banana nucleus 22.03 32.64
GSMUA_Achr4P12210_001 Banana nucleus 25.17 32.14
HORVU1Hr1G051780.2 Barley nucleus 32.87 32.08
Zm00001d035982_P001 Maize nucleus 9.79 31.82
TraesCS1D01G203900.1 Wheat nucleus 32.17 31.62
CDY50908 Canola nucleus 34.62 31.43
Bra000434.1-P Field mustard nucleus 33.92 31.29
OQU93364 Sorghum nucleus 36.01 31.21
Zm00001d027409_P001 Maize nucleus 35.66 31.19
CDX83351 Canola nucleus 33.57 31.17
AT2G46870.1 Thale cress nucleus 33.57 30.97
TraesCS2A01G394700.1 Wheat nucleus 43.36 30.69
Solyc08g013700.1.1 Tomato nucleus 31.47 30.61
HORVU4Hr1G084950.3 Barley nucleus 36.36 30.5
PGSC0003DMT400015010 Potato nucleus 31.82 30.33
TraesCS2B01G412700.1 Wheat nucleus 43.36 30.32
TraesCS2D01G392400.1 Wheat nucleus 43.01 30.07
PGSC0003DMT400015011 Potato nucleus 32.87 30.03
CDX67872 Canola nucleus 29.72 29.82
GSMUA_Achr6P35600_001 Banana nucleus 25.17 29.75
Bra003482.1-P Field mustard nucleus 29.72 29.72
Os04t0581400-01 Rice nucleus 30.42 29.69
HORVU7Hr1G046950.1 Barley nucleus 28.32 29.56
EES12712 Sorghum nucleus 43.36 29.52
CDX90001 Canola nucleus 35.31 29.36
Solyc08g013690.1.1 Tomato nucleus 33.22 29.32
CDY15208 Canola nucleus 32.87 29.19
Os02t0683500-01 Rice nucleus 41.96 29.13
HORVU6Hr1G066190.2 Barley nucleus 41.61 29.1
Zm00001d002562_P001 Maize nucleus 41.61 29.1
TraesCS6B01G286900.1 Wheat nucleus 41.26 28.85
Bra033294.1-P Field mustard nucleus 34.62 28.78
Bra007646.1-P Field mustard nucleus 29.37 28.77
CDX76605 Canola nucleus 29.37 28.77
CDY11388 Canola nucleus 29.37 28.77
AT3G61970.1 Thale cress nucleus 30.07 28.76
TraesCS6A01G259600.1 Wheat nucleus 41.61 28.74
TraesCS6D01G240600.1 Wheat nucleus 41.61 28.74
CDY58763 Canola nucleus 31.82 28.62
Bra014415.1-P Field mustard nucleus 31.82 28.44
CDY58764 Canola nucleus 31.82 28.44
CDY69432 Canola nucleus 27.62 28.42
Zm00001d026005_P001 Maize nucleus 39.51 27.97
Bra030497.1-P Field mustard nucleus 34.62 27.97
GSMUA_Achr6P13140_001 Banana nucleus 24.13 27.94
AT1G01030.1 Thale cress nucleus 34.97 27.93
Solyc08g083400.2.1 Tomato nucleus 31.47 26.95
Zm00001d051471_P001 Maize nucleus 39.51 26.9
GSMUA_Achr5P20340_001 Banana nucleus 31.47 26.71
Zm00001d017618_P001 Maize nucleus 38.81 26.3
EES07445 Sorghum nucleus 39.51 26.04
VIT_02s0025g03000.t01 Wine grape nucleus 41.26 25.88
PGSC0003DMT400031863 Potato nucleus 36.01 25.37
VIT_15s0048g02370.t01 Wine grape nucleus 40.21 24.95
KRG97268 Soybean nucleus 34.97 24.21
GSMUA_Achr1P21250_001 Banana nucleus 24.83 24.15
GSMUA_Achr6P18320_001 Banana nucleus 28.67 24.12
GSMUA_Achr5P09950_001 Banana nucleus 26.92 23.91
KRH68988 Soybean nucleus 34.62 23.57
GSMUA_Achr6P09880_001 Banana nucleus 23.78 23.53
GSMUA_Achr1P05400_001 Banana nucleus 24.13 23.15
GSMUA_Achr6P01420_001 Banana nucleus 25.52 23.1
KRH47753 Soybean nucleus 38.11 21.8
AT4G01500.1 Thale cress nucleus 25.17 21.62
GSMUA_Achr2P22560_001 Banana nucleus 23.43 21.61
GSMUA_Achr3P29380_001 Banana nucleus 19.58 21.29
KRH06334 Soybean nucleus 40.91 20.1
CDY07140 Canola nucleus 21.33 19.93
Bra008552.1-P Field mustard nucleus 23.08 19.53
CDX97251 Canola nucleus 23.08 19.47
Bra037417.1-P Field mustard nucleus 20.98 19.35
CDY49614 Canola nucleus 20.98 19.35
GSMUA_AchrUn_... Banana nucleus 25.17 19.25
GSMUA_Achr10P... Banana nucleus 17.83 17.47
GSMUA_Achr4P06710_001 Banana nucleus 21.33 17.43
GSMUA_Achr3P21100_001 Banana nucleus 24.48 16.99
GSMUA_Achr4P03670_001 Banana nucleus 17.13 16.67
GSMUA_Achr9P21470_001 Banana nucleus 16.78 15.48
GSMUA_Achr11P... Banana nucleus 18.18 15.48
GSMUA_Achr8P14650_001 Banana nucleus 21.33 14.73
Protein Annotations
Gene3D:2.40.330.10MapMan:35.1InterPro:B3_DNA-bdInterPro:DNA-bd_pseudobarrel_sfGO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006139GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987EnsemblPlantsGene:GSMUA_Achr9G18780_001EnsemblPlants:GSMUA_Achr9P18780_001EnsemblPlants:GSMUA_Achr9T18780_001InterPro:IPR003340InterPro:IPR015300
UniProt:M0U1I5PFAM:PF02362PANTHER:PTHR31140PANTHER:PTHR31140:SF4SUPFAM:SSF101936UniParc:UPI000294F764
SEG:seg:::::
Description
Putative B3 domain-containing protein Os03g0120900 [Source:GMGC_GENE;Acc:GSMUA_Achr9G18780_001]
Coordinates
chr9:-:14656614..14657654
Molecular Weight (calculated)
31195.9 Da
IEP (calculated)
8.706
GRAVY (calculated)
-0.499
Length
286 amino acids
Sequence
(BLAST)
001: MEFTSGRRDG LYIIGEEKQK DAFTYPSIFA LSSSSSSPST STAFRWHVRP CDGGAAGDGR RESDFFTEKE HMFDKVVTPS DVGKLNRLVI PKQHAESQSY
101: VMTKGWSRFV KEKRLDAGDI VSFGRGVGES TRDQHYIDWK PRPVNGDIPM LPLNPLTGVS LARPLGPWGG HTGGGQLLFF RSSMARPPQI AAQRDSGSGP
201: PMVLSSPPLV RNQAEAKRVR LFGVNLDCPE SKGDEHLVPS ARSPSAAQLQ PASTLPFHPL PHGSMEFSEA SSSTNKDLHL PLDLGL
Best Arabidopsis Sequence Match ( AT2G46870.1 )
(BLAST)
001: MMTDLSLTRD EDEEEAKPLA EEEGAREVAD REHMFDKVVT PSDVGKLNRL VIPKQHAERF FPLDSSSNEK GLLLNFEDLT GKSWRFRYSY WNSSQSYVMT
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
Arabidopsis Description
NGA1B3 domain-containing transcription factor NGA1 [Source:UniProtKB/Swiss-Prot;Acc:O82799]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.