Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr4P24970_001 | Banana | nucleus | 60.84 | 74.04 |
GSMUA_Achr5P10220_001 | Banana | nucleus | 65.38 | 68.75 |
GSMUA_Achr5P12850_001 | Banana | nucleus | 42.66 | 57.82 |
GSMUA_Achr2P00400_001 | Banana | nucleus | 50.0 | 49.65 |
GSMUA_Achr2P10230_001 | Banana | nucleus | 52.45 | 49.34 |
GSMUA_Achr4P30170_001 | Banana | nucleus | 42.31 | 48.59 |
GSMUA_Achr4P26430_001 | Banana | nucleus | 41.26 | 47.2 |
GSMUA_Achr1P03600_001 | Banana | nucleus | 54.2 | 46.97 |
GSMUA_Achr7P04630_001 | Banana | nucleus | 27.97 | 38.84 |
Zm00001d029749_P001 | Maize | nucleus | 36.71 | 38.46 |
CDY67348 | Canola | nucleus | 19.93 | 38.0 |
EER92015 | Sorghum | nucleus | 36.36 | 37.96 |
Zm00001d047359_P001 | Maize | nucleus | 36.01 | 37.18 |
GSMUA_Achr9P08980_001 | Banana | nucleus | 20.63 | 36.42 |
GSMUA_AchrUn_... | Banana | cytosol | 30.42 | 36.1 |
GSMUA_Achr11P... | Banana | nucleus | 23.08 | 35.68 |
Os03t0120900-01 | Rice | nucleus | 37.41 | 34.41 |
CDY43060 | Canola | cytosol | 19.58 | 34.36 |
GSMUA_Achr3P19210_001 | Banana | nucleus | 24.13 | 34.33 |
TraesCS1A01G200500.1 | Wheat | nucleus | 33.22 | 34.17 |
Zm00001d010077_P001 | Maize | nucleus | 30.77 | 33.98 |
Os10t0537100-00 | Rice | nucleus | 37.06 | 33.97 |
TraesCS4B01G348500.1 | Wheat | nucleus | 37.76 | 33.86 |
TraesCS1B01G215000.1 | Wheat | nucleus | 32.52 | 33.82 |
Bra040478.1-P | Field mustard | nucleus | 34.62 | 33.79 |
TraesCS5A01G516600.1 | Wheat | nucleus | 37.41 | 33.75 |
CDY27515 | Canola | nucleus | 35.31 | 33.22 |
Zm00001d048815_P001 | Maize | nucleus | 26.92 | 33.19 |
Bra004501.1-P | Field mustard | nucleus | 34.27 | 33.0 |
CDX80053 | Canola | nucleus | 34.27 | 33.0 |
CDY48008 | Canola | nucleus | 34.97 | 32.89 |
CDY41564 | Canola | nucleus | 33.92 | 32.66 |
GSMUA_Achr9P02600_001 | Banana | nucleus | 22.03 | 32.64 |
GSMUA_Achr4P12210_001 | Banana | nucleus | 25.17 | 32.14 |
HORVU1Hr1G051780.2 | Barley | nucleus | 32.87 | 32.08 |
Zm00001d035982_P001 | Maize | nucleus | 9.79 | 31.82 |
TraesCS1D01G203900.1 | Wheat | nucleus | 32.17 | 31.62 |
CDY50908 | Canola | nucleus | 34.62 | 31.43 |
Bra000434.1-P | Field mustard | nucleus | 33.92 | 31.29 |
OQU93364 | Sorghum | nucleus | 36.01 | 31.21 |
Zm00001d027409_P001 | Maize | nucleus | 35.66 | 31.19 |
CDX83351 | Canola | nucleus | 33.57 | 31.17 |
AT2G46870.1 | Thale cress | nucleus | 33.57 | 30.97 |
TraesCS2A01G394700.1 | Wheat | nucleus | 43.36 | 30.69 |
Solyc08g013700.1.1 | Tomato | nucleus | 31.47 | 30.61 |
HORVU4Hr1G084950.3 | Barley | nucleus | 36.36 | 30.5 |
PGSC0003DMT400015010 | Potato | nucleus | 31.82 | 30.33 |
TraesCS2B01G412700.1 | Wheat | nucleus | 43.36 | 30.32 |
TraesCS2D01G392400.1 | Wheat | nucleus | 43.01 | 30.07 |
PGSC0003DMT400015011 | Potato | nucleus | 32.87 | 30.03 |
CDX67872 | Canola | nucleus | 29.72 | 29.82 |
GSMUA_Achr6P35600_001 | Banana | nucleus | 25.17 | 29.75 |
Bra003482.1-P | Field mustard | nucleus | 29.72 | 29.72 |
Os04t0581400-01 | Rice | nucleus | 30.42 | 29.69 |
HORVU7Hr1G046950.1 | Barley | nucleus | 28.32 | 29.56 |
EES12712 | Sorghum | nucleus | 43.36 | 29.52 |
CDX90001 | Canola | nucleus | 35.31 | 29.36 |
Solyc08g013690.1.1 | Tomato | nucleus | 33.22 | 29.32 |
CDY15208 | Canola | nucleus | 32.87 | 29.19 |
Os02t0683500-01 | Rice | nucleus | 41.96 | 29.13 |
HORVU6Hr1G066190.2 | Barley | nucleus | 41.61 | 29.1 |
Zm00001d002562_P001 | Maize | nucleus | 41.61 | 29.1 |
TraesCS6B01G286900.1 | Wheat | nucleus | 41.26 | 28.85 |
Bra033294.1-P | Field mustard | nucleus | 34.62 | 28.78 |
Bra007646.1-P | Field mustard | nucleus | 29.37 | 28.77 |
CDX76605 | Canola | nucleus | 29.37 | 28.77 |
CDY11388 | Canola | nucleus | 29.37 | 28.77 |
AT3G61970.1 | Thale cress | nucleus | 30.07 | 28.76 |
TraesCS6A01G259600.1 | Wheat | nucleus | 41.61 | 28.74 |
TraesCS6D01G240600.1 | Wheat | nucleus | 41.61 | 28.74 |
CDY58763 | Canola | nucleus | 31.82 | 28.62 |
Bra014415.1-P | Field mustard | nucleus | 31.82 | 28.44 |
CDY58764 | Canola | nucleus | 31.82 | 28.44 |
CDY69432 | Canola | nucleus | 27.62 | 28.42 |
Zm00001d026005_P001 | Maize | nucleus | 39.51 | 27.97 |
Bra030497.1-P | Field mustard | nucleus | 34.62 | 27.97 |
GSMUA_Achr6P13140_001 | Banana | nucleus | 24.13 | 27.94 |
AT1G01030.1 | Thale cress | nucleus | 34.97 | 27.93 |
Solyc08g083400.2.1 | Tomato | nucleus | 31.47 | 26.95 |
Zm00001d051471_P001 | Maize | nucleus | 39.51 | 26.9 |
GSMUA_Achr5P20340_001 | Banana | nucleus | 31.47 | 26.71 |
Zm00001d017618_P001 | Maize | nucleus | 38.81 | 26.3 |
EES07445 | Sorghum | nucleus | 39.51 | 26.04 |
VIT_02s0025g03000.t01 | Wine grape | nucleus | 41.26 | 25.88 |
PGSC0003DMT400031863 | Potato | nucleus | 36.01 | 25.37 |
VIT_15s0048g02370.t01 | Wine grape | nucleus | 40.21 | 24.95 |
KRG97268 | Soybean | nucleus | 34.97 | 24.21 |
GSMUA_Achr1P21250_001 | Banana | nucleus | 24.83 | 24.15 |
GSMUA_Achr6P18320_001 | Banana | nucleus | 28.67 | 24.12 |
GSMUA_Achr5P09950_001 | Banana | nucleus | 26.92 | 23.91 |
KRH68988 | Soybean | nucleus | 34.62 | 23.57 |
GSMUA_Achr6P09880_001 | Banana | nucleus | 23.78 | 23.53 |
GSMUA_Achr1P05400_001 | Banana | nucleus | 24.13 | 23.15 |
GSMUA_Achr6P01420_001 | Banana | nucleus | 25.52 | 23.1 |
KRH47753 | Soybean | nucleus | 38.11 | 21.8 |
AT4G01500.1 | Thale cress | nucleus | 25.17 | 21.62 |
GSMUA_Achr2P22560_001 | Banana | nucleus | 23.43 | 21.61 |
GSMUA_Achr3P29380_001 | Banana | nucleus | 19.58 | 21.29 |
KRH06334 | Soybean | nucleus | 40.91 | 20.1 |
CDY07140 | Canola | nucleus | 21.33 | 19.93 |
Bra008552.1-P | Field mustard | nucleus | 23.08 | 19.53 |
CDX97251 | Canola | nucleus | 23.08 | 19.47 |
Bra037417.1-P | Field mustard | nucleus | 20.98 | 19.35 |
CDY49614 | Canola | nucleus | 20.98 | 19.35 |
GSMUA_AchrUn_... | Banana | nucleus | 25.17 | 19.25 |
GSMUA_Achr10P... | Banana | nucleus | 17.83 | 17.47 |
GSMUA_Achr4P06710_001 | Banana | nucleus | 21.33 | 17.43 |
GSMUA_Achr3P21100_001 | Banana | nucleus | 24.48 | 16.99 |
GSMUA_Achr4P03670_001 | Banana | nucleus | 17.13 | 16.67 |
GSMUA_Achr9P21470_001 | Banana | nucleus | 16.78 | 15.48 |
GSMUA_Achr11P... | Banana | nucleus | 18.18 | 15.48 |
GSMUA_Achr8P14650_001 | Banana | nucleus | 21.33 | 14.73 |
Protein Annotations
Gene3D:2.40.330.10 | MapMan:35.1 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G18780_001 | EnsemblPlants:GSMUA_Achr9P18780_001 | EnsemblPlants:GSMUA_Achr9T18780_001 | InterPro:IPR003340 | InterPro:IPR015300 |
UniProt:M0U1I5 | PFAM:PF02362 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | SUPFAM:SSF101936 | UniParc:UPI000294F764 |
SEG:seg | : | : | : | : | : |
Description
Putative B3 domain-containing protein Os03g0120900 [Source:GMGC_GENE;Acc:GSMUA_Achr9G18780_001]
Coordinates
chr9:-:14656614..14657654
Molecular Weight (calculated)
31195.9 Da
IEP (calculated)
8.706
GRAVY (calculated)
-0.499
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFTSGRRDG LYIIGEEKQK DAFTYPSIFA LSSSSSSPST STAFRWHVRP CDGGAAGDGR RESDFFTEKE HMFDKVVTPS DVGKLNRLVI PKQHAESQSY
101: VMTKGWSRFV KEKRLDAGDI VSFGRGVGES TRDQHYIDWK PRPVNGDIPM LPLNPLTGVS LARPLGPWGG HTGGGQLLFF RSSMARPPQI AAQRDSGSGP
201: PMVLSSPPLV RNQAEAKRVR LFGVNLDCPE SKGDEHLVPS ARSPSAAQLQ PASTLPFHPL PHGSMEFSEA SSSTNKDLHL PLDLGL
101: VMTKGWSRFV KEKRLDAGDI VSFGRGVGES TRDQHYIDWK PRPVNGDIPM LPLNPLTGVS LARPLGPWGG HTGGGQLLFF RSSMARPPQI AAQRDSGSGP
201: PMVLSSPPLV RNQAEAKRVR LFGVNLDCPE SKGDEHLVPS ARSPSAAQLQ PASTLPFHPL PHGSMEFSEA SSSTNKDLHL PLDLGL
001: MMTDLSLTRD EDEEEAKPLA EEEGAREVAD REHMFDKVVT PSDVGKLNRL VIPKQHAERF FPLDSSSNEK GLLLNFEDLT GKSWRFRYSY WNSSQSYVMT
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
101: KGWSRFVKDK KLDAGDIVSF QRCVGDSGRD SRLFIDWRRR PKVPDHPHFA AGAMFPRFYS FPSTNYSLYN HQQQRHHHSG GGYNYHQIPR EFGYGYFVRS
201: VDQRNNPAAA VADPLVIESV PVMMHGRANQ ELVGTAGKRL RLFGVDMECG ESGMTNSTEE ESSSSGGSLP RGGGGGASSS SFFQLRLGSS SEDDHFTKKG
301: KSSLSFDLDQ
Arabidopsis Description
NGA1B3 domain-containing transcription factor NGA1 [Source:UniProtKB/Swiss-Prot;Acc:O82799]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.