Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06334 | Soybean | nucleus | 89.0 | 76.46 |
| Zm00001d035982_P001 | Maize | nucleus | 12.4 | 70.45 |
| KRH68988 | Soybean | nucleus | 45.4 | 54.05 |
| KRG97268 | Soybean | nucleus | 44.6 | 54.0 |
| Bra004501.1-P | Field mustard | nucleus | 30.0 | 50.51 |
| CDX80053 | Canola | nucleus | 30.0 | 50.51 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 25.2 | 50.4 |
| CDY41564 | Canola | nucleus | 29.6 | 49.83 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 24.2 | 48.59 |
| AT2G46870.1 | Thale cress | nucleus | 30.0 | 48.39 |
| Bra040478.1-P | Field mustard | nucleus | 28.2 | 48.12 |
| CDY48008 | Canola | nucleus | 29.0 | 47.7 |
| CDY50908 | Canola | nucleus | 30.0 | 47.62 |
| Bra000434.1-P | Field mustard | nucleus | 29.4 | 47.42 |
| Zm00001d048815_P001 | Maize | nucleus | 22.0 | 47.41 |
| CDY27515 | Canola | nucleus | 28.8 | 47.37 |
| CDX83351 | Canola | nucleus | 29.0 | 47.08 |
| CDX76605 | Canola | nucleus | 27.4 | 46.92 |
| CDY11388 | Canola | nucleus | 27.4 | 46.92 |
| Solyc08g013700.1.1 | Tomato | nucleus | 27.4 | 46.6 |
| Bra007646.1-P | Field mustard | nucleus | 27.2 | 46.58 |
| Bra003482.1-P | Field mustard | nucleus | 26.6 | 46.5 |
| CDY69432 | Canola | nucleus | 25.8 | 46.4 |
| PGSC0003DMT400015010 | Potato | nucleus | 27.8 | 46.33 |
| CDX67872 | Canola | nucleus | 26.4 | 46.32 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 19.4 | 45.97 |
| Zm00001d010077_P001 | Maize | nucleus | 23.8 | 45.95 |
| Os04t0581400-01 | Rice | nucleus | 26.8 | 45.73 |
| AT3G61970.1 | Thale cress | nucleus | 27.2 | 45.48 |
| EER92015 | Sorghum | nucleus | 24.8 | 45.26 |
| Zm00001d029749_P001 | Maize | nucleus | 24.6 | 45.05 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 28.4 | 44.8 |
| PGSC0003DMT400015011 | Potato | nucleus | 27.8 | 44.41 |
| Zm00001d047359_P001 | Maize | nucleus | 24.6 | 44.4 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 28.2 | 44.2 |
| CDY58763 | Canola | nucleus | 28.0 | 44.03 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 35.8 | 43.77 |
| Bra014415.1-P | Field mustard | nucleus | 28.0 | 43.75 |
| CDY58764 | Canola | nucleus | 28.0 | 43.75 |
| Os03t0120900-01 | Rice | nucleus | 27.2 | 43.73 |
| Os02t0683500-01 | Rice | nucleus | 36.0 | 43.69 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 36.0 | 43.48 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 35.4 | 43.28 |
| Solyc08g013690.1.1 | Tomato | nucleus | 28.0 | 43.21 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 24.0 | 43.17 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 35.6 | 43.0 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 16.6 | 42.56 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 23.4 | 42.55 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 16.8 | 42.42 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 16.8 | 42.0 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 16.4 | 41.84 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 34.2 | 41.81 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 28.4 | 41.64 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 33.6 | 41.58 |
| Zm00001d002562_P001 | Maize | nucleus | 34.0 | 41.56 |
| OQU93364 | Sorghum | nucleus | 27.4 | 41.52 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 18.0 | 41.47 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 16.2 | 41.33 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 33.8 | 41.32 |
| Zm00001d027409_P001 | Maize | nucleus | 27.0 | 41.28 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 24.0 | 41.24 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 27.2 | 41.21 |
| Os06t0107800-02 | Rice | nucleus | 16.4 | 41.21 |
| Os10t0537100-00 | Rice | nucleus | 25.6 | 41.03 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 24.0 | 40.96 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 19.2 | 40.85 |
| Zm00001d035903_P001 | Maize | nucleus | 18.2 | 40.62 |
| EES12712 | Sorghum | nucleus | 34.0 | 40.48 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 22.0 | 40.15 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 17.4 | 40.09 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 17.2 | 40.0 |
| Solyc08g083400.2.1 | Tomato | nucleus | 26.6 | 39.82 |
| Zm00001d024103_P001 | Maize | nucleus | 17.8 | 39.73 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 17.4 | 39.55 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 22.6 | 39.24 |
| Zm00001d017618_P001 | Maize | nucleus | 32.8 | 38.86 |
| Zm00001d026005_P001 | Maize | nucleus | 31.4 | 38.86 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 16.0 | 38.84 |
| Zm00001d051471_P001 | Maize | nucleus | 32.6 | 38.81 |
| KXG19112 | Sorghum | nucleus | 15.8 | 38.54 |
| EES07445 | Sorghum | nucleus | 33.2 | 38.25 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 23.2 | 38.16 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 21.8 | 38.11 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 20.6 | 37.87 |
| PGSC0003DMT400031863 | Potato | nucleus | 30.4 | 37.44 |
| GSMUA_AchrUn_... | Banana | cytosol | 18.0 | 37.34 |
| KXG19111 | Sorghum | nucleus | 17.6 | 36.97 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 32.8 | 35.96 |
| Zm00001d024545_P001 | Maize | nucleus | 17.4 | 34.94 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 23.2 | 34.42 |
| EES13386 | Sorghum | nucleus | 17.4 | 34.39 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 15.4 | 34.38 |
| KRH67965 | Soybean | nucleus | 19.8 | 34.38 |
| KRG96220 | Soybean | nucleus | 20.2 | 33.78 |
| Os08t0157700-00 | Rice | nucleus | 18.8 | 32.75 |
| KRH32791 | Soybean | nucleus | 21.8 | 32.34 |
| KRH72242 | Soybean | nucleus | 21.6 | 31.4 |
| KRH34761 | Soybean | nucleus | 19.6 | 27.92 |
| KRG92025 | Soybean | nucleus | 19.4 | 26.8 |
| KRH75484 | Soybean | nucleus | 20.4 | 26.56 |
| KRH70603 | Soybean | nucleus | 20.4 | 25.44 |
| KRG93082 | Soybean | nucleus | 14.0 | 21.94 |
Protein Annotations
| EntrezGene:100778733 | MapMan:15.5.5.3 | Gene3D:2.40.330.10 | UniProt:A0A0R0J5H3 | EMBL:ACUP02004162 | InterPro:B3_DNA-bd |
| ncoils:Coil | InterPro:DNA-bd_pseudobarrel_sf | EnsemblPlantsGene:GLYMA_07G048200 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR003340 | InterPro:IPR015300 | EnsemblPlants:KRH47753 | ProteinID:KRH47753 | ProteinID:KRH47753.1 | PFAM:PF02362 |
| PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0006ED81B3 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:4061864..4064502
Molecular Weight (calculated)
56288.7 Da
IEP (calculated)
7.120
GRAVY (calculated)
-0.954
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MELMQEVKGY SDGREEEEEE EEAAEEIITR EESSKSHNSS SGLGLLHQHQ EAAGSNFIIN NNHHHHQHHH HHTTKQLDFM DLSLGSSKDE GNLQGSSSSV
101: YAHHHHAASA SSSANGNNNN SSSSNLQQQQ QQPAEKEHMF DKVVTPSDVG KLNRLVIPKQ HAEKYFPLDS SANEKGLLLN FEDRNGKLWR FRYSYWNSSQ
201: SYVMTKGWSR FVKEKKLDAG DMVSFQRGVG ELYRHRLYID WWRRPDHHHH HHHGPDHSTT LFTPFLIPNQ PHHLMSIRWG ATGRLYSLPS PTPPRHHEHL
301: NYNNNAMYHP FHHHGAGSGI NATTHHYNNY HEMSSTTTSG SAGSVFYHRS TPPISMPLAD HQTLNTRQQQ QQQQQQEGAG NVSLSPMIID SVPVAHHLHH
401: QQHHGGKSSG PSSTSTSPST AGKRLRLFGV NMECASSTSE DPKCFSLLSS SSMANSNSQP PLQLLREDTL SSSSARFGDQ RGVGEPSMLF DLDPSLQYRQ
101: YAHHHHAASA SSSANGNNNN SSSSNLQQQQ QQPAEKEHMF DKVVTPSDVG KLNRLVIPKQ HAEKYFPLDS SANEKGLLLN FEDRNGKLWR FRYSYWNSSQ
201: SYVMTKGWSR FVKEKKLDAG DMVSFQRGVG ELYRHRLYID WWRRPDHHHH HHHGPDHSTT LFTPFLIPNQ PHHLMSIRWG ATGRLYSLPS PTPPRHHEHL
301: NYNNNAMYHP FHHHGAGSGI NATTHHYNNY HEMSSTTTSG SAGSVFYHRS TPPISMPLAD HQTLNTRQQQ QQQQQQEGAG NVSLSPMIID SVPVAHHLHH
401: QQHHGGKSSG PSSTSTSPST AGKRLRLFGV NMECASSTSE DPKCFSLLSS SSMANSNSQP PLQLLREDTL SSSSARFGDQ RGVGEPSMLF DLDPSLQYRQ
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.