Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030458.1-P | Field mustard | nucleus | 46.08 | 46.52 |
| VIT_11s0037g00010.t01 | Wine grape | nucleus | 52.04 | 46.5 |
| AT1G50680.1 | Thale cress | nucleus | 48.9 | 46.29 |
| CDY37130 | Canola | nucleus | 48.59 | 45.72 |
| CDY22814 | Canola | nucleus | 47.96 | 45.4 |
| CDY37109 | Canola | nucleus | 47.34 | 45.35 |
| PGSC0003DMT400085602 | Potato | nucleus | 18.18 | 45.31 |
| Bra018854.1-P | Field mustard | nucleus | 48.28 | 45.29 |
| CDY65812 | Canola | nucleus | 39.81 | 45.2 |
| AT1G51120.1 | Thale cress | nucleus | 49.84 | 45.17 |
| Bra030476.1-P | Field mustard | nucleus | 45.45 | 44.62 |
| Bra018868.1-P | Field mustard | nucleus | 47.02 | 44.38 |
| CDY35575 | Canola | nucleus | 47.96 | 44.35 |
| CDY29599 | Canola | nucleus | 45.14 | 44.31 |
| Bra014282.1-P | Field mustard | nucleus | 47.02 | 44.25 |
| CDY46564 | Canola | nucleus | 47.02 | 44.25 |
| CDY29620 | Canola | nucleus | 47.65 | 44.19 |
| Bra018869.1-P | Field mustard | nucleus | 46.08 | 44.01 |
| CDY51249 | Canola | nucleus | 46.71 | 43.95 |
| CDY37108 | Canola | nucleus, plastid | 45.45 | 42.27 |
| CDY22826 | Canola | nucleus | 44.51 | 42.01 |
| Bra018894.1-P | Field mustard | nucleus | 44.2 | 41.72 |
| Solyc03g083110.1.1 | Tomato | nucleus | 43.57 | 41.49 |
| CDY22801 | Canola | nucleus | 44.51 | 40.8 |
| CDY25209 | Canola | nucleus | 45.14 | 40.56 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 39.81 | 30.68 |
| GSMUA_Achr11P... | Banana | nucleus | 31.97 | 30.36 |
| PGSC0003DMT400092316 | Potato | nucleus | 12.54 | 30.08 |
| KRH34761 | Soybean | nucleus | 32.29 | 29.34 |
| Solyc12g098460.1.1 | Tomato | nucleus | 19.12 | 29.19 |
| KRG92025 | Soybean | nucleus | 31.35 | 27.62 |
| KRH75484 | Soybean | nucleus | 32.29 | 26.82 |
| KRH70603 | Soybean | nucleus | 31.97 | 25.44 |
| KRH67965 | Soybean | nucleus | 19.12 | 21.18 |
| KRG96220 | Soybean | nucleus | 19.75 | 21.07 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 18.5 | 20.7 |
| EES14747 | Sorghum | plastid | 17.24 | 19.71 |
| Os02t0455800-01 | Rice | nucleus | 16.3 | 19.48 |
| KRH32791 | Soybean | nucleus | 20.38 | 19.29 |
| PGSC0003DMT400040900 | Potato | nucleus | 9.09 | 18.95 |
| KRH72242 | Soybean | nucleus | 20.06 | 18.6 |
| KXG24821 | Sorghum | nucleus | 15.99 | 17.89 |
| Os02t0455900-00 | Rice | nucleus | 15.05 | 17.65 |
| KRG97268 | Soybean | nucleus | 20.38 | 15.74 |
| KRH68988 | Soybean | nucleus | 20.06 | 15.24 |
| KRH47753 | Soybean | nucleus | 21.94 | 14.0 |
| KRH06334 | Soybean | nucleus | 22.26 | 12.2 |
Protein Annotations
| MapMan:15.5.5.3 | MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | UniProt:A0A0R0ESD6 | EMBL:ACUP02012779 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:B3_DNA-bd | InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | EnsemblPlantsGene:GLYMA_20G247300 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR003340 |
| InterPro:IPR015300 | InterPro:IPR036955 | EnsemblPlants:KRG93082 | ProteinID:KRG93082 | ProteinID:KRG93082.1 | PFAM:PF02362 |
| PFscan:PS50863 | PFscan:PS51032 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF17 | SMART:SM00380 | SMART:SM01019 |
| SUPFAM:SSF101936 | SUPFAM:SSF54171 | UniParc:UPI00023DBEF5 | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:47682897..47683856
Molecular Weight (calculated)
36203.5 Da
IEP (calculated)
8.106
GRAVY (calculated)
-0.619
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MIQTYKESSD CSEIKFAFDA VVKRARHEEN NAAAQKFKGV VSQQNGNWGA QIYAHQQRIW LGTFKSEREA AMAYDSASIK LRSGECHRNF PWNDQTVQEP
101: QFQSHYSAET VLNMIRDGTY PSKFATFLKT RQTQKGVAKH IGLKGDDEEQ FCCTQLFQKE LTPSDVGKLN RLVIPKKHAV SYFPYVGGSA DESGSVDVEA
201: VFYDKLMRLW KFRYCYWKSS QSYVFTRGWN RFVKDKKLKA KDVIAFFTWG KSGGEGEAFA LIDVIYNNNA EEDSKGDTKQ VLGNQLQLAG SEEGEDEDAN
301: IGKDFNAQKG LRLFGVCIT
101: QFQSHYSAET VLNMIRDGTY PSKFATFLKT RQTQKGVAKH IGLKGDDEEQ FCCTQLFQKE LTPSDVGKLN RLVIPKKHAV SYFPYVGGSA DESGSVDVEA
201: VFYDKLMRLW KFRYCYWKSS QSYVFTRGWN RFVKDKKLKA KDVIAFFTWG KSGGEGEAFA LIDVIYNNNA EEDSKGDTKQ VLGNQLQLAG SEEGEDEDAN
301: IGKDFNAQKG LRLFGVCIT
001: MRLDDEPENA LVVSSSPKTV VASGNVKYKG VVQQQNGHWG AQIYADHKRI WLGTFKSADE AATAYDSASI KLRSFDANSH RNFPWSTITL NEPDFQNCYT
101: TETVLNMIRD GSYQHKFRDF LRIRSQIVAS INIGGPKQAR GEVNQESDKC FSCTQLFQKE LTPSDVGKLN RLVIPKKYAV KYMPFISADQ SEKEEGEIVG
201: SVEDVEVVFY DRAMRQWKFR YCYWKSSQSF VFTRGWNSFV KEKNLKEKDV IAFYTCDVPN NVKTLEGQRK NFLMIDVHCF SDNGSVVAEE VSMTVHDSSV
301: QVKKTENLVS SMLEDKETKS EENKGGFMLF GVRIECP
101: TETVLNMIRD GSYQHKFRDF LRIRSQIVAS INIGGPKQAR GEVNQESDKC FSCTQLFQKE LTPSDVGKLN RLVIPKKYAV KYMPFISADQ SEKEEGEIVG
201: SVEDVEVVFY DRAMRQWKFR YCYWKSSQSF VFTRGWNSFV KEKNLKEKDV IAFYTCDVPN NVKTLEGQRK NFLMIDVHCF SDNGSVVAEE VSMTVHDSSV
301: QVKKTENLVS SMLEDKETKS EENKGGFMLF GVRIECP
Arabidopsis Description
AP2/ERF and B3 domain-containing transcription factor At1g50680 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6P5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.