Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P14650_001 | Banana | nucleus | 62.2 | 50.48 |
| VIT_11s0037g00010.t01 | Wine grape | nucleus | 35.42 | 33.33 |
| Bra030458.1-P | Field mustard | nucleus | 30.95 | 32.91 |
| KRG93082 | Soybean | nucleus | 30.36 | 31.97 |
| CDY29599 | Canola | nucleus | 30.65 | 31.69 |
| Bra030476.1-P | Field mustard | nucleus | 30.65 | 31.69 |
| CDY65812 | Canola | nucleus | 26.19 | 31.32 |
| Bra014282.1-P | Field mustard | nucleus | 31.55 | 31.27 |
| CDY46564 | Canola | nucleus | 31.55 | 31.27 |
| AT1G50680.1 | Thale cress | nucleus | 31.25 | 31.16 |
| Bra018868.1-P | Field mustard | nucleus | 31.25 | 31.07 |
| CDY51249 | Canola | nucleus | 31.25 | 30.97 |
| CDY37109 | Canola | nucleus | 30.65 | 30.93 |
| CDY35575 | Canola | nucleus | 31.55 | 30.72 |
| CDY29620 | Canola | nucleus | 31.25 | 30.52 |
| Solyc03g083110.1.1 | Tomato | nucleus | 30.36 | 30.45 |
| AT1G51120.1 | Thale cress | nucleus | 31.55 | 30.11 |
| CDY22814 | Canola | nucleus | 30.06 | 29.97 |
| PGSC0003DMT400085602 | Potato | nucleus | 11.31 | 29.69 |
| CDY22826 | Canola | nucleus | 29.76 | 29.59 |
| Bra018894.1-P | Field mustard | nucleus | 29.76 | 29.59 |
| Bra018854.1-P | Field mustard | nucleus | 29.46 | 29.12 |
| Bra018869.1-P | Field mustard | nucleus | 28.57 | 28.74 |
| CDY25209 | Canola | nucleus | 30.36 | 28.73 |
| GSMUA_Achr11P... | Banana | nucleus | 15.77 | 28.65 |
| CDY37130 | Canola | nucleus | 28.87 | 28.61 |
| GSMUA_Achr6P09880_001 | Banana | nucleus | 23.51 | 27.34 |
| CDY37108 | Canola | nucleus, plastid | 27.68 | 27.11 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 12.8 | 26.54 |
| CDY22801 | Canola | nucleus | 27.38 | 26.44 |
| GSMUA_Achr3P29380_001 | Banana | nucleus | 20.54 | 26.24 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 14.88 | 25.91 |
| GSMUA_Achr1P21250_001 | Banana | nucleus | 22.62 | 25.85 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 15.48 | 25.24 |
| GSMUA_Achr1P05400_001 | Banana | nucleus | 22.32 | 25.17 |
| PGSC0003DMT400092316 | Potato | nucleus | 9.52 | 24.06 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 14.29 | 23.88 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 14.88 | 23.7 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.96 | 23.65 |
| GSMUA_Achr5P09950_001 | Banana | nucleus | 22.62 | 23.6 |
| GSMUA_Achr2P22560_001 | Banana | nucleus | 21.13 | 22.9 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 15.18 | 22.77 |
| GSMUA_Achr6P01420_001 | Banana | nucleus | 20.83 | 22.15 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 15.48 | 22.13 |
| PGSC0003DMT400040900 | Potato | nucleus | 9.82 | 21.57 |
| GSMUA_Achr10P... | Banana | nucleus | 18.45 | 21.23 |
| GSMUA_Achr4P03670_001 | Banana | nucleus | 18.45 | 21.09 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 15.18 | 21.07 |
| GSMUA_Achr9P21470_001 | Banana | nucleus | 19.35 | 20.97 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 15.18 | 20.65 |
| Solyc12g098460.1.1 | Tomato | nucleus | 12.8 | 20.57 |
| GSMUA_Achr4P06710_001 | Banana | nucleus | 21.13 | 20.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 22.32 | 20.05 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 14.58 | 19.68 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 14.58 | 19.6 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 15.77 | 19.49 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 15.48 | 18.18 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 15.18 | 17.89 |
| GSMUA_Achr3P21100_001 | Banana | nucleus | 21.43 | 17.48 |
| Os02t0455800-01 | Rice | nucleus | 13.69 | 17.23 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 15.48 | 17.11 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 14.58 | 17.01 |
| EES14747 | Sorghum | plastid | 13.99 | 16.85 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 16.37 | 16.18 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 15.77 | 16.06 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 15.18 | 15.13 |
| Os02t0455900-00 | Rice | nucleus | 12.2 | 15.07 |
| KXG24821 | Sorghum | nucleus | 12.2 | 14.39 |
Protein Annotations
| MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:B3_DNA-bd |
| InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSMUA_Achr11G06170_001 | EnsemblPlants:GSMUA_Achr11P06170_001 | EnsemblPlants:GSMUA_Achr11T06170_001 | InterPro:IPR001471 | InterPro:IPR003340 | InterPro:IPR015300 |
| InterPro:IPR036955 | UniProt:M0RPU7 | PFAM:PF02362 | PFscan:PS51032 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF17 |
| SMART:SM00380 | SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54171 | UniParc:UPI000296203B | SEG:seg |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G06170_001]
Coordinates
chr11:+:4812860..4813975
Molecular Weight (calculated)
37233.9 Da
IEP (calculated)
9.505
GRAVY (calculated)
-0.616
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAVPAARE GPDSSCIFWG RASPFMAAAT GTSNDPNPST PYRGVMLLPD GHWGAQIYAR GHRVWLGRFE SEIAAAGAFD SAAVKLHHGD YSHRNLPATR
101: HAAHERRFQE TFSIDDVLDM IRDGSYCSRL EEYTRLHAAP IRDLPHARTT SNVTFLEMFV KELTPSDVGK LNRLVIPKKH ATHQSYVFTK GWNKFVKEKR
201: LQAKDTVAFY RCEESDGHRR TYCMIDIIRH NSGGDRSGGS SRSTSGVIGL GLGFKRKKME NGDEEDHCSC GFSRRKSGVM GVGLDLSLER VTAKKDDEGG
301: VVTGSAAPRK SSETQDKKKG LKLFGVWIAD ENDRRG
101: HAAHERRFQE TFSIDDVLDM IRDGSYCSRL EEYTRLHAAP IRDLPHARTT SNVTFLEMFV KELTPSDVGK LNRLVIPKKH ATHQSYVFTK GWNKFVKEKR
201: LQAKDTVAFY RCEESDGHRR TYCMIDIIRH NSGGDRSGGS SRSTSGVIGL GLGFKRKKME NGDEEDHCSC GFSRRKSGVM GVGLDLSLER VTAKKDDEGG
301: VVTGSAAPRK SSETQDKKKG LKLFGVWIAD ENDRRG
001: MDEMSNVAKT TTETSGLTDS VLSLTKRMKP TEVTTTTKPA LSNTTKFKGV VQQQNGHWGA QIYADHRRIW LGTFKSAHEA AAAYDSASIK LRSFDANSHR
101: NFPWSDFTLH EPDFQECYTT EAVLNMIRDG SYQHKFRDFL RIRSQIVANI NIVGSKQVLG GGEGGQESNK CFSCTQLFQK ELTPSDVGKL NRLVIPKKYA
201: VKYMPFISDD QSEKETSEGV EDVEVVFYDR AMRQWKFRYC YWRSSQSFVF TRGWNGFVKE KNLKEKDIIV FYTCDVPNNV KTLEGQSKTF LMIDVHHFSG
301: NGFVVPEEVN KTVHEISDEE MKTETLFTSK VEEETKSEEK KGGFMLFGVR IQ
101: NFPWSDFTLH EPDFQECYTT EAVLNMIRDG SYQHKFRDFL RIRSQIVANI NIVGSKQVLG GGEGGQESNK CFSCTQLFQK ELTPSDVGKL NRLVIPKKYA
201: VKYMPFISDD QSEKETSEGV EDVEVVFYDR AMRQWKFRYC YWRSSQSFVF TRGWNGFVKE KNLKEKDIIV FYTCDVPNNV KTLEGQSKTF LMIDVHHFSG
301: NGFVVPEEVN KTVHEISDEE MKTETLFTSK VEEETKSEEK KGGFMLFGVR IQ
Arabidopsis Description
AP2/ERF and B3 domain-containing transcription factor At1g51120 [Source:UniProtKB/Swiss-Prot;Acc:Q9C688]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.