Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0455900-00 | Rice | nucleus | 47.19 | 46.32 |
| Os06t0107800-02 | Rice | nucleus | 20.6 | 27.64 |
| PGSC0003DMT400092316 | Potato | nucleus | 11.98 | 24.06 |
| Os11t0156000-01 | Rice | nucleus | 24.34 | 23.3 |
| PGSC0003DMT400085602 | Potato | nucleus | 10.49 | 21.88 |
| Os03t0120900-01 | Rice | nucleus | 25.09 | 21.54 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 22.47 | 21.05 |
| Os10t0537100-00 | Rice | nucleus | 23.6 | 20.19 |
| EES14747 | Sorghum | plastid | 20.97 | 20.07 |
| Os12t0157000-01 | Rice | cytosol, nucleus | 14.98 | 19.05 |
| Os05t0549800-01 | Rice | nucleus | 23.97 | 18.66 |
| KXG24821 | Sorghum | nucleus | 19.85 | 18.6 |
| Os08t0157700-00 | Rice | nucleus | 19.48 | 18.12 |
| Os02t0764100-01 | Rice | mitochondrion | 16.85 | 17.79 |
| Os04t0581400-01 | Rice | nucleus | 19.48 | 17.75 |
| Os01t0140700-00 | Rice | nucleus | 20.97 | 17.67 |
| Os01t0141000-01 | Rice | nucleus, plastid | 23.97 | 17.53 |
| Solyc12g098460.1.1 | Tomato | nucleus | 13.48 | 17.22 |
| Os01t0693400-01 | Rice | nucleus | 24.72 | 16.79 |
| Bra030458.1-P | Field mustard | nucleus | 19.48 | 16.46 |
| KRG93082 | Soybean | nucleus | 19.48 | 16.3 |
| Os02t0683500-01 | Rice | nucleus | 24.72 | 16.02 |
| AT1G50680.1 | Thale cress | nucleus | 19.85 | 15.73 |
| CDY29599 | Canola | nucleus | 19.1 | 15.69 |
| Bra030476.1-P | Field mustard | nucleus | 19.1 | 15.69 |
| CDY22826 | Canola | nucleus | 19.48 | 15.38 |
| Bra018894.1-P | Field mustard | nucleus | 19.48 | 15.38 |
| CDY35575 | Canola | nucleus | 19.85 | 15.36 |
| CDY29620 | Canola | nucleus | 19.48 | 15.12 |
| Bra018868.1-P | Field mustard | nucleus | 19.1 | 15.09 |
| CDY51249 | Canola | nucleus | 19.1 | 15.04 |
| CDY46564 | Canola | nucleus | 19.1 | 15.04 |
| Bra014282.1-P | Field mustard | nucleus | 19.1 | 15.04 |
| CDY22814 | Canola | nucleus | 18.73 | 14.84 |
| CDY37109 | Canola | nucleus | 18.35 | 14.71 |
| CDY65812 | Canola | nucleus | 15.36 | 14.59 |
| AT1G51120.1 | Thale cress | nucleus | 19.1 | 14.49 |
| CDY37130 | Canola | nucleus | 18.35 | 14.45 |
| CDY25209 | Canola | nucleus | 19.1 | 14.37 |
| Bra018854.1-P | Field mustard | nucleus | 17.98 | 14.12 |
| Bra018869.1-P | Field mustard | nucleus | 17.6 | 14.07 |
| Solyc03g083110.1.1 | Tomato | nucleus | 17.6 | 14.03 |
| VIT_11s0037g00010.t01 | Wine grape | nucleus | 18.73 | 14.01 |
| PGSC0003DMT400040900 | Potato | nucleus | 7.87 | 13.73 |
| GSMUA_Achr11P... | Banana | nucleus | 17.23 | 13.69 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 20.97 | 13.53 |
| CDY37108 | Canola | nucleus, plastid | 16.48 | 12.83 |
| CDY22801 | Canola | nucleus | 15.36 | 11.78 |
Protein Annotations
| Gene3D:2.40.330.10 | MapMan:35.1 | EntrezGene:9271162 | EMBL:AK242688 | InterPro:B3_DNA-bd | ProteinID:BAD19926.1 |
| ProteinID:BAD19989.1 | ProteinID:BAH91671.1 | ProteinID:BAS78522.1 | InterPro:DNA-bd_pseudobarrel_sf | ProteinID:EAZ22918.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 | EnsemblPlantsGene:Os02g0455800 | EnsemblPlants:Os02t0455800-01 |
| PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF9 | UniProt:Q6K3B2 | SMART:SM01019 |
| SUPFAM:SSF101936 | UniParc:UPI00003759D0 | RefSeq:XP_015625111.1 | SEG:seg | : | : |
Description
Transcriptional factor B3 family protein. (Os02t0455800-01)
Coordinates
chr2:+:15130358..15131464
Molecular Weight (calculated)
29361.5 Da
IEP (calculated)
8.896
GRAVY (calculated)
-0.184
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASLPLSAA IVGAEESVDK EVLEMEYLFE KFLMPSDLCS NTEWLGIPEE HVRKFGMMLE DRDGYSVIFF QDGVVPGKLW CFRYWKSNGV HGLTKGWRCF
101: VREKGLKAGD TISFFRGSAC GRLFICCRLG THATFASSST LHHGFSMPPP PARPLVGLQS GMLARDVPSL GQARLHDGNQ DGGGAPSRHV PSSGRRVEAQ
201: LSRVSSRRQR RTMKHSIPEP TIETPPILES MFLIAAPPAV KCLRLFGVNI YVLPVSSSGQ PKQESSP
101: VREKGLKAGD TISFFRGSAC GRLFICCRLG THATFASSST LHHGFSMPPP PARPLVGLQS GMLARDVPSL GQARLHDGNQ DGGGAPSRHV PSSGRRVEAQ
201: LSRVSSRRQR RTMKHSIPEP TIETPPILES MFLIAAPPAV KCLRLFGVNI YVLPVSSSGQ PKQESSP
001: MNISTMNLDQ ELAEIRASSS DHTNYFYSSE RREHMFDKVL TPSDVGKLNR LVIPKQHAEN FFPLEDNQNG TVLDFQDKNG KMWRFRYSYW NSSQSYVMTK
101: GWSRFVKEKK LFAGDTVSFY RGYIPDDNAQ PERRRKIMFI DWRPRAEINF VHNINNHNFV FGSPTYPTAR FYPVTPEYSM PYRSFPPFYQ NQFQEREYLG
201: YGYGRVVNGN GVRYYAGSPL DQHHQWNLGR SEPLVYDSVP VFPAGRVPPS APPQPSTTKK LRLFGVDVEE SSSSGDTRGE MGVAGYSSSS PVVIRDDDQS
301: FWRSPRGEMA SSSSAMQLSD DEEYKRKGKS LEL
101: GWSRFVKEKK LFAGDTVSFY RGYIPDDNAQ PERRRKIMFI DWRPRAEINF VHNINNHNFV FGSPTYPTAR FYPVTPEYSM PYRSFPPFYQ NQFQEREYLG
201: YGYGRVVNGN GVRYYAGSPL DQHHQWNLGR SEPLVYDSVP VFPAGRVPPS APPQPSTTKK LRLFGVDVEE SSSSGDTRGE MGVAGYSSSS PVVIRDDDQS
301: FWRSPRGEMA SSSSAMQLSD DEEYKRKGKS LEL
Arabidopsis Description
NGA4NGA4 [Source:UniProtKB/TrEMBL;Acc:A0A178V2Z9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.