Factsheet for Os08t0157700-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024545_P001	Maize	nucleus	52.96	61.04
EES13386	Sorghum	nucleus	53.66	60.87
Os06t0107800-02	Rice	nucleus	33.8	48.74
CDY67348	Canola	nucleus	21.6	41.33
CDY43060	Canola	cytosol	19.16	33.74
GSMUA_Achr7P04630_001	Banana	nucleus	23.69	33.01
Os10t0537100-00	Rice	nucleus	34.15	31.41
Solyc08g013700.1.1	Tomato	nucleus	30.66	29.93
GSMUA_AchrUn_...	Banana	cytosol	25.09	29.88
CDY69432	Canola	nucleus	28.92	29.86
CDX67872	Canola	nucleus	29.62	29.82
Bra003482.1-P	Field mustard	nucleus	29.62	29.72
Bra007646.1-P	Field mustard	nucleus	29.97	29.45
Bra040478.1-P	Field mustard	nucleus	29.97	29.35
PGSC0003DMT400015010	Potato	nucleus	30.66	29.33
Os03t0120900-01	Rice	nucleus	31.71	29.26
AT2G46870.1	Thale cress	nucleus	31.36	29.03
CDY48008	Canola	nucleus	30.66	28.95
CDX83351	Canola	nucleus	31.01	28.9
CDY11388	Canola	nucleus	29.27	28.77
CDX76605	Canola	nucleus	29.27	28.77
AT3G61970.1	Thale cress	nucleus	29.97	28.76
Bra000434.1-P	Field mustard	nucleus	31.01	28.71
Os11t0156000-01	Rice	nucleus	27.87	28.67
CDX80053	Canola	nucleus	29.62	28.62
CDY41564	Canola	nucleus	29.62	28.62
Bra004501.1-P	Field mustard	nucleus	29.62	28.62
CDY27515	Canola	nucleus	30.31	28.62
Os04t0581400-01	Rice	nucleus	28.92	28.33
CDY50908	Canola	nucleus	31.01	28.25
PGSC0003DMT400015011	Potato	nucleus	30.66	28.11
GSMUA_Achr4P12210_001	Banana	nucleus	21.6	27.68
CDY58763	Canola	nucleus	30.31	27.36
Solyc08g013690.1.1	Tomato	nucleus	30.66	27.16
CDY58764	Canola	nucleus	29.97	26.88
Bra014415.1-P	Field mustard	nucleus	29.97	26.88
AT4G01500.1	Thale cress	nucleus	31.01	26.73
Os01t0140700-00	Rice	nucleus	29.27	26.5
CDY15208	Canola	nucleus	29.27	26.09
CDX90001	Canola	nucleus	30.66	25.58
Os01t0141000-01	Rice	nucleus, plastid	32.06	25.21
Bra033294.1-P	Field mustard	nucleus	29.97	25.0
Os05t0549800-01	Rice	nucleus	29.62	24.78
AT1G01030.1	Thale cress	nucleus	30.66	24.58
Bra030497.1-P	Field mustard	nucleus	29.97	24.29
Bra008552.1-P	Field mustard	nucleus	28.57	24.26
CDX97251	Canola	nucleus	28.57	24.19
Solyc08g083400.2.1	Tomato	nucleus	27.87	23.95
Os02t0683500-01	Rice	nucleus	34.15	23.79
Bra037417.1-P	Field mustard	nucleus	25.44	23.55
CDY49614	Canola	nucleus	25.44	23.55
CDY07140	Canola	nucleus	25.09	23.53
KRG97268	Soybean	nucleus	33.45	23.24
KRH68988	Soybean	nucleus	32.75	22.38
PGSC0003DMT400031863	Potato	nucleus	31.01	21.92
Os02t0764100-01	Rice	mitochondrion	19.16	21.74
Os01t0693400-01	Rice	nucleus	29.62	21.63
VIT_02s0025g03000.t01	Wine grape	nucleus	33.8	21.27
VIT_15s0048g02370.t01	Wine grape	nucleus	32.4	20.17
Os02t0455800-01	Rice	nucleus	18.12	19.48
KRH47753	Soybean	nucleus	32.75	18.8
Os02t0455900-00	Rice	nucleus	16.03	16.91
KRH06334	Soybean	nucleus	33.1	16.32
Os12t0157000-01	Rice	cytosol, nucleus	11.5	15.71

Protein Annotations

EntrezGene:107277666	MapMan:15.5.5.3	Gene3D:2.40.330.10	InterPro:B3_DNA-bd	ProteinID:BAC99651.1	ProteinID:BAT03908.1
ncoils:Coil	InterPro:DNA-bd_pseudobarrel_sf	ProteinID:EAZ41573.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003340	InterPro:IPR015300	EnsemblPlantsGene:Os08g0157700	EnsemblPlants:Os08t0157700-00	PFAM:PF02362	PFscan:PS50863
PANTHER:PTHR31140	PANTHER:PTHR31140:SF14	UniProt:Q7EZD5	SMART:SM01019	SUPFAM:SSF101936	UniParc:UPI00001D8DA0
RefSeq:XP_015649372.1	SEG:seg	:	:	:	:

Description

Similar to NGA1 (NGATHA1); transcription factor. (Os08t0157700-00)

Coordinates

chr8:+:3377469..3378332

Molecular Weight (calculated)

30721.6 Da

IEP (calculated)

4.803

GRAVY (calculated)

-0.321

Length

287 amino acids

Sequence
(BLAST)

001: MYMDLTLGGA LLQVEEATEE EEEEEEEEQA LGQEPAPAAA AAALVLGRRH GVVVGGGGGG VVVAAEREHM FDKVVTPSDV GKLNRLVVPK QHAERFFPAA
101: AAGTQLCFED RAGTPWRFRY SYWGSSQSYV MTKGWSRFVR AARLSAGDTV SFSRAADGRY FIDYRHCHRH GGRDISFASA ATAMPAAAWP LFGRVQTAAP
201: VSYGGGHGSA AAATMFLDTV APVAAAGGHR GEVGPSGQRS FRLFGVNVEC GGDVDAAAEE EDADDDVDDG DHRRGEEMEL VMWTNHR

Best Arabidopsis Sequence Match ( AT3G61970.1 )
(BLAST)

001: MNQEDKEKPI EEASSSMERE HMFDKVVTPS DVGKLNRLVI PKQHAERYFP LDNSTTNDSN KGLLLNFEDR SGNSWRFRYS YWNSSQSYVM TKGWSRFVKD
101: KKLDAGDIVS FQRDSCNKDK LYIDWRRRPK IPDHHHQQFA GAMFPRFYTF PHPQMPTNYE THNLYHRFHQ RDLGIGYYVR SMERSHPTAV IESVPVMMQR
201: RAQVASMASR GEKRLRLFGV DMECGGGGGS VNSTEEESSS SGGSIPRGRV SMVGAGSLLQ LRLVSSDDES LVAMEAASLE DHHFFTKKGK PSLSFDLDR

Arabidopsis Description

NGA2NGA2 [Source:UniProtKB/TrEMBL;Acc:A0A178V7R1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.