Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g013690.1.1 | Tomato | nucleus | 89.78 | 86.73 |
| PGSC0003DMT400015010 | Potato | nucleus | 77.96 | 81.33 |
| Solyc08g013700.1.1 | Tomato | nucleus | 71.89 | 76.53 |
| Zm00001d035982_P001 | Maize | nucleus | 17.25 | 61.36 |
| PGSC0003DMT400031863 | Potato | nucleus | 59.74 | 46.06 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 35.46 | 44.4 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 34.5 | 43.37 |
| Zm00001d048815_P001 | Maize | nucleus | 31.95 | 43.1 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 28.75 | 42.65 |
| Zm00001d029749_P001 | Maize | nucleus | 37.06 | 42.49 |
| EER92015 | Sorghum | nucleus | 36.74 | 41.97 |
| Zm00001d047359_P001 | Maize | nucleus | 37.06 | 41.88 |
| Zm00001d010077_P001 | Maize | nucleus | 34.5 | 41.7 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 25.56 | 41.03 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 25.88 | 40.91 |
| Os03t0120900-01 | Rice | nucleus | 40.26 | 40.51 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 25.24 | 40.31 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 26.52 | 40.29 |
| Os06t0107800-02 | Rice | nucleus | 25.56 | 40.2 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 25.56 | 40.0 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 24.92 | 39.8 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 35.14 | 39.57 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 34.5 | 39.27 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 39.62 | 39.12 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 39.62 | 38.87 |
| KXG19112 | Sorghum | nucleus | 25.24 | 38.54 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 26.52 | 38.25 |
| Zm00001d027409_P001 | Maize | nucleus | 39.62 | 37.92 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 35.14 | 37.8 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 26.2 | 37.79 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 25.88 | 37.67 |
| OQU93364 | Sorghum | nucleus | 39.62 | 37.58 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 32.59 | 37.23 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 34.82 | 37.2 |
| Os10t0537100-00 | Rice | nucleus | 37.06 | 37.18 |
| Zm00001d035903_P001 | Maize | nucleus | 26.52 | 37.05 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 38.98 | 36.97 |
| Os04t0581400-01 | Rice | nucleus | 34.5 | 36.86 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 25.88 | 36.82 |
| Zm00001d024103_P001 | Maize | nucleus | 26.2 | 36.61 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 27.48 | 36.6 |
| GSMUA_AchrUn_... | Banana | cytosol | 27.8 | 36.1 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 39.3 | 36.07 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 30.03 | 34.56 |
| KXG19111 | Sorghum | nucleus | 26.2 | 34.45 |
| EES13386 | Sorghum | nucleus | 27.8 | 34.39 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 44.73 | 34.23 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 44.73 | 34.23 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 49.84 | 34.21 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 44.73 | 33.82 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 44.73 | 33.82 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 43.77 | 33.5 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 43.13 | 33.42 |
| Zm00001d024545_P001 | Maize | nucleus | 26.52 | 33.33 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 43.45 | 33.25 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 30.35 | 32.99 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 30.03 | 32.87 |
| Os02t0683500-01 | Rice | nucleus | 43.13 | 32.77 |
| Zm00001d002562_P001 | Maize | nucleus | 42.49 | 32.52 |
| Zm00001d026005_P001 | Maize | nucleus | 41.85 | 32.43 |
| EES12712 | Sorghum | nucleus | 43.45 | 32.38 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 31.31 | 32.24 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 23.0 | 32.14 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 34.5 | 32.05 |
| PGSC0003DMT400072354 | Potato | nucleus | 29.39 | 31.94 |
| KRG97268 | Soybean | nucleus | 41.85 | 31.72 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 46.33 | 31.45 |
| KRH68988 | Soybean | nucleus | 41.85 | 31.19 |
| Os08t0157700-00 | Rice | nucleus | 28.11 | 30.66 |
| Zm00001d017618_P001 | Maize | nucleus | 41.21 | 30.57 |
| EES07445 | Sorghum | nucleus | 41.85 | 30.18 |
| PGSC0003DMT400085602 | Potato | nucleus | 12.14 | 29.69 |
| Zm00001d051471_P001 | Maize | nucleus | 39.62 | 29.52 |
| PGSC0003DMT400023077 | Potato | nucleus | 30.67 | 28.66 |
| KRH47753 | Soybean | nucleus | 44.41 | 27.8 |
| PGSC0003DMT400092316 | Potato | nucleus | 10.54 | 24.81 |
| PGSC0003DMT400019296 | Potato | nucleus | 29.39 | 24.8 |
| KRH06334 | Soybean | nucleus | 46.01 | 24.74 |
| PGSC0003DMT400002125 | Potato | nucleus | 29.39 | 23.12 |
| PGSC0003DMT400040900 | Potato | nucleus | 5.75 | 11.76 |
Protein Annotations
| EntrezGene:102603967 | MapMan:15.5.5.3 | Gene3D:2.40.330.10 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 | UniProt:M1A594 | PFAM:PF02362 |
| EnsemblPlantsGene:PGSC0003DMG400005857 | PGSC:PGSC0003DMG400005857 | EnsemblPlants:PGSC0003DMT400015011 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF38 |
| SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI000296A7C4 | RefSeq:XP_006352221.1 | SEG:seg | : |
Description
Transcription factor [Source:PGSC_GENE;Acc:PGSC0003DMG400005857]
Coordinates
chr8:-:5469187..5470896
Molecular Weight (calculated)
35748.6 Da
IEP (calculated)
7.764
GRAVY (calculated)
-0.735
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFFGSVVRE EASSSSYHNQ QLKRPSSTTE LTLMDSSTSD AMIEREHMFD KVVTPSDVGK LNRLVIPKQH AEKYFPLDSS SNDKGGLLLN FEDSNGKPWR
101: FRYSYWNSSQ SYVMTKGWSR FVKEKKLDAG DIVSFQRGAG ELSKHRLFID WRRRPHENIN NQFMMPHQFS DGRLFHLQSY YPTTYSSNLL FEGGSNIGQP
201: PNYYNPHSYM YGIGNLSYNM SNSAVINANP LNNEIRWGGC SNTSNYVEPR VFDSVPVVQG KVAAKRFRLF GVNMDCPMDH PDTSSIPTTT YNSHLNNNSE
301: ESSEKGKSFD LDI
101: FRYSYWNSSQ SYVMTKGWSR FVKEKKLDAG DIVSFQRGAG ELSKHRLFID WRRRPHENIN NQFMMPHQFS DGRLFHLQSY YPTTYSSNLL FEGGSNIGQP
201: PNYYNPHSYM YGIGNLSYNM SNSAVINANP LNNEIRWGGC SNTSNYVEPR VFDSVPVVQG KVAAKRFRLF GVNMDCPMDH PDTSSIPTTT YNSHLNNNSE
301: ESSEKGKSFD LDI
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.