Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017618_P001 | Maize | nucleus | 82.86 | 82.46 |
| EES07445 | Sorghum | nucleus | 83.1 | 80.41 |
| Zm00001d035982_P001 | Maize | nucleus | 13.57 | 64.77 |
| Zm00001d002562_P001 | Maize | nucleus | 60.95 | 62.59 |
| Zm00001d026005_P001 | Maize | nucleus | 58.33 | 60.64 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 58.33 | 60.64 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 58.81 | 60.39 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 58.57 | 60.15 |
| Os04t0581400-01 | Rice | nucleus | 37.86 | 54.27 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 30.48 | 51.2 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 30.24 | 51.0 |
| Zm00001d047359_P001 | Maize | nucleus | 32.38 | 49.1 |
| Zm00001d029749_P001 | Maize | nucleus | 31.67 | 48.72 |
| Zm00001d048815_P001 | Maize | nucleus | 26.9 | 48.71 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 24.05 | 47.87 |
| Bra004501.1-P | Field mustard | nucleus | 33.33 | 47.14 |
| CDX80053 | Canola | nucleus | 33.33 | 47.14 |
| CDY41564 | Canola | nucleus | 33.1 | 46.8 |
| Zm00001d010077_P001 | Maize | nucleus | 28.81 | 46.72 |
| Bra040478.1-P | Field mustard | nucleus | 32.38 | 46.42 |
| Zm00001d027409_P001 | Maize | nucleus | 35.95 | 46.18 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 35.71 | 45.45 |
| CDY48008 | Canola | nucleus | 32.86 | 45.39 |
| CDY67348 | Canola | nucleus | 16.19 | 45.33 |
| CDY50908 | Canola | nucleus | 33.33 | 44.44 |
| AT2G46870.1 | Thale cress | nucleus | 32.62 | 44.19 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 28.57 | 44.12 |
| CDY27515 | Canola | nucleus | 31.9 | 44.08 |
| Bra000434.1-P | Field mustard | nucleus | 32.38 | 43.87 |
| CDX83351 | Canola | nucleus | 32.14 | 43.83 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 24.29 | 43.4 |
| Zm00001d035903_P001 | Maize | nucleus | 23.1 | 43.3 |
| Solyc08g013700.1.1 | Tomato | nucleus | 29.52 | 42.18 |
| Zm00001d024103_P001 | Maize | nucleus | 22.38 | 41.96 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 30.0 | 41.45 |
| Bra003482.1-P | Field mustard | nucleus | 28.1 | 41.26 |
| CDY43060 | Canola | cytosol | 15.95 | 41.1 |
| CDX67872 | Canola | nucleus | 27.86 | 41.05 |
| PGSC0003DMT400015010 | Potato | nucleus | 29.05 | 40.67 |
| CDY69432 | Canola | nucleus | 26.9 | 40.65 |
| Solyc08g013690.1.1 | Tomato | nucleus | 30.95 | 40.12 |
| Solyc08g083400.2.1 | Tomato | nucleus | 31.67 | 39.82 |
| AT3G61970.1 | Thale cress | nucleus | 28.33 | 39.8 |
| Bra007646.1-P | Field mustard | nucleus | 27.62 | 39.73 |
| CDX76605 | Canola | nucleus | 27.62 | 39.73 |
| CDY11388 | Canola | nucleus | 27.62 | 39.73 |
| PGSC0003DMT400015011 | Potato | nucleus | 29.52 | 39.62 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 26.9 | 39.51 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 26.19 | 38.19 |
| Bra014415.1-P | Field mustard | nucleus | 28.81 | 37.81 |
| CDY58764 | Canola | nucleus | 28.81 | 37.81 |
| CDY58763 | Canola | nucleus | 28.57 | 37.74 |
| CDX90001 | Canola | nucleus | 30.48 | 37.21 |
| CDY15208 | Canola | nucleus | 28.1 | 36.65 |
| Bra033294.1-P | Field mustard | nucleus | 30.0 | 36.63 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 29.05 | 36.2 |
| PGSC0003DMT400031863 | Potato | nucleus | 34.29 | 35.47 |
| KRG97268 | Soybean | nucleus | 34.76 | 35.35 |
| KRH68988 | Soybean | nucleus | 35.0 | 35.0 |
| AT1G01030.1 | Thale cress | nucleus | 29.76 | 34.92 |
| Bra030497.1-P | Field mustard | nucleus | 29.29 | 34.75 |
| Zm00001d023446_P001 | Maize | nucleus | 23.1 | 34.28 |
| KRH47753 | Soybean | nucleus | 38.81 | 32.6 |
| Zm00001d024545_P001 | Maize | nucleus | 19.05 | 32.13 |
| Zm00001d052591_P001 | Maize | nucleus | 23.1 | 31.6 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 33.1 | 30.48 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 33.33 | 30.37 |
| KRH06334 | Soybean | nucleus | 39.29 | 28.35 |
| AT4G01500.1 | Thale cress | nucleus | 22.14 | 27.93 |
| Zm00001d043782_P001 | Maize | nucleus | 25.71 | 27.76 |
| Zm00001d024354_P001 | Maize | nucleus, plastid | 18.81 | 27.72 |
| Zm00001d009468_P001 | Maize | nucleus, plastid | 24.29 | 27.2 |
| CDX97251 | Canola | nucleus | 21.9 | 27.14 |
| Bra008552.1-P | Field mustard | nucleus | 21.67 | 26.92 |
| Zm00001d038907_P001 | Maize | nucleus, plastid | 25.95 | 26.85 |
| Zm00001d011639_P001 | Maize | nucleus | 25.71 | 26.67 |
| CDY07140 | Canola | nucleus | 19.05 | 26.14 |
| Bra037417.1-P | Field mustard | nucleus | 19.05 | 25.81 |
| CDY49614 | Canola | nucleus | 19.05 | 25.81 |
| Zm00001d039907_P001 | Maize | nucleus | 21.67 | 24.07 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | UniProt:A0A1D6Q723 | ProteinID:AQK54292.1 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 |
| PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF39 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0008447668 |
| EnsemblPlantsGene:Zm00001d051471 | EnsemblPlants:Zm00001d051471_P001 | EnsemblPlants:Zm00001d051471_T001 | SEG:seg | : | : |
Description
B3 domain-containing transcription factor NGA2
Coordinates
chr4:-:159866823..159868085
Molecular Weight (calculated)
45227.9 Da
IEP (calculated)
9.690
GRAVY (calculated)
-0.495
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQFAASRRF SRNDGADEEQ EDVSNSMREI SFMPGAASSS AAASASASGS SCAPFRSASA DGAGASGSGG DGDGSGDVEK EHMFDKVVTP SDVGKLNRLV
101: IPKQYAEKYF PLDAAGNEKG LLLSFEDSDG KHWRFRYSYW NSSQSYVMTK GWSRFVKEKR LVAGDTVSFS RSRSAAEVVD DARRHRLFID WKRRGLDTRG
201: PLRFSGLALP MPLASYYGAP HHYSSWGLGG GGGFFMPPSP PATLYEHRLR QGLDFRGMTT YPALTVGRQL LFFGSPRMPP HHAQPQPRPL PLPLHHYTMQ
301: PSAAGVTAAS ASRPLVVDVD SVPAIESPTT AAKRVRLFGV NLDNKPLSVS DGGREASHQS GSGNALLPLP QMPGGWQQRT PTLRLLELPR HGAESSAASS
401: PSSSSSAKRE ARSAALDLDL
101: IPKQYAEKYF PLDAAGNEKG LLLSFEDSDG KHWRFRYSYW NSSQSYVMTK GWSRFVKEKR LVAGDTVSFS RSRSAAEVVD DARRHRLFID WKRRGLDTRG
201: PLRFSGLALP MPLASYYGAP HHYSSWGLGG GGGFFMPPSP PATLYEHRLR QGLDFRGMTT YPALTVGRQL LFFGSPRMPP HHAQPQPRPL PLPLHHYTMQ
301: PSAAGVTAAS ASRPLVVDVD SVPAIESPTT AAKRVRLFGV NLDNKPLSVS DGGREASHQS GSGNALLPLP QMPGGWQQRT PTLRLLELPR HGAESSAASS
401: PSSSSSAKRE ARSAALDLDL
001: MDLSLAPTTT TSSDQEQDRD QELTSNIGAS SSSGPSGNNN NLPMMMIPPP EKEHMFDKVV TPSDVGKLNR LVIPKQHAER YFPLDSSNNQ NGTLLNFQDR
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
101: NGKMWRFRYS YWNSSQSYVM TKGWSRFVKE KKLDAGDIVS FQRGIGDESE RSKLYIDWRH RPDMSLVQAH QFGNFGFNFN FPTTSQYSNR FHPLPEYNSV
201: PIHRGLNIGN HQRSYYNTQR QEFVGYGYGN LAGRCYYTGS PLDHRNIVGS EPLVIDSVPV VPGRLTPVML PPLPPPPSTA GKRLRLFGVN MECGNDYNQQ
301: EESWLVPRGE IGASSSSSSA LRLNLSTDHD DDNDDGDDGD DDQFAKKGKS SLSLNFNP
Arabidopsis Description
NGA3NGA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3T3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.