Factsheet for Zm00001d052591_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27771	Sorghum	nucleus	76.22	85.4
TraesCS4B01G117100.1	Wheat	nucleus	64.5	70.97
TraesCS4A01G198300.2	Wheat	nucleus	63.84	70.25
TraesCS4D01G114900.1	Wheat	nucleus	63.52	69.15
Os11t0156000-01	Rice	nucleus	62.54	68.82
Zm00001d023446_P001	Maize	nucleus	58.96	63.96
HORVU4Hr1G021650.22	Barley	nucleus	54.4	59.86
GSMUA_Achr9P02600_001	Banana	nucleus	35.5	56.48
GSMUA_Achr3P19210_001	Banana	nucleus	36.48	55.72
Zm00001d035982_P001	Maize	nucleus	15.96	55.68
GSMUA_Achr6P13140_001	Banana	nucleus	42.02	52.23
GSMUA_Achr6P35600_001	Banana	nucleus	39.74	50.41
GSMUA_Achr9P08980_001	Banana	nucleus	24.76	46.91
Bra017262.1-P	Field mustard	nucleus	36.48	45.71
CDY43751	Canola	nucleus	36.16	45.68
AT2G36080.1	Thale cress	nucleus	35.83	45.08
CDX84162	Canola	nucleus	35.5	44.86
Bra005301.1-P	Field mustard	nucleus	36.16	44.76
CDX75073	Canola	nucleus	36.16	44.76
Bra001411.1-P	Field mustard	nucleus	33.88	44.07
CDX73868	Canola	nucleus	33.88	44.07
CDY08512	Canola	nucleus	35.18	43.55
CDY01036	Canola	nucleus	35.83	42.8
Bra034828.1-P	Field mustard	nucleus	35.5	42.25
CDY62470	Canola	nucleus	31.27	42.11
GSMUA_Achr11P...	Banana	nucleus	25.08	41.62
Bra041023.1-P	Field mustard	nucleus	35.18	40.91
Bra005886.1-P	Field mustard	nucleus	33.88	38.95
CDY47260	Canola	nucleus	33.88	38.95
AT5G06250.4	Thale cress	nucleus	35.83	38.73
KRH67965	Soybean	nucleus	35.18	37.5
VIT_08s0007g02810.t01	Wine grape	nucleus	34.53	37.19
Zm00001d035903_P001	Maize	nucleus	26.71	36.61
KRG96220	Soybean	nucleus	35.18	36.12
Zm00001d024103_P001	Maize	nucleus	26.06	35.71
KRH32791	Soybean	nucleus	38.76	35.31
CDX80996	Canola	nucleus	31.6	35.27
KRH72242	Soybean	nucleus	39.41	35.17
Zm00001d010077_P001	Maize	nucleus	29.64	35.14
Zm00001d048815_P001	Maize	nucleus	26.38	34.91
Zm00001d029749_P001	Maize	nucleus	30.94	34.8
PGSC0003DMT400072354	Potato	nucleus	32.25	34.38
Zm00001d047359_P001	Maize	nucleus	30.94	34.3
Solyc10g083210.1.1	Tomato	nucleus	33.55	33.44
PGSC0003DMT400023077	Potato	nucleus	34.85	31.94
Solyc09g010230.1.1	Tomato	nucleus	35.5	31.59
Zm00001d027409_P001	Maize	nucleus	33.55	31.5
Zm00001d024545_P001	Maize	nucleus	24.76	30.52
AT3G11580.3	Thale cress	cytosol, endoplasmic reticulum, nucleus	36.48	30.19
CDY70080	Canola	nucleus	23.45	30.13
CDX98911	Canola	nucleus	23.45	30.13
Bra009171.1-P	Field mustard	nucleus	23.45	30.13
GSMUA_Achr6P18320_001	Banana	nucleus	29.32	26.47
Zm00001d024354_P001	Maize	nucleus, plastid	24.1	25.96
Zm00001d002562_P001	Maize	nucleus	32.25	24.21
Zm00001d026005_P001	Maize	nucleus	31.27	23.76
Zm00001d009468_P001	Maize	nucleus, plastid	28.34	23.2
Zm00001d043782_P001	Maize	nucleus	29.32	23.14
Zm00001d051471_P001	Maize	nucleus	31.6	23.1
Zm00001d017618_P001	Maize	nucleus	31.6	22.99
Zm00001d038907_P001	Maize	nucleus, plastid	29.97	22.66
Zm00001d011639_P001	Maize	nucleus	28.99	21.98
Zm00001d039907_P001	Maize	nucleus	26.38	21.43

Protein Annotations

EntrezGene:100193310	MapMan:15.5.5.3	Gene3D:2.40.330.10	ProteinID:AQK57470.1	InterPro:B3_DNA-bd	UniProt:B4FEK2
EMBL:BT035540	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR003340
InterPro:IPR015300	PFAM:PF02362	PFscan:PS50863	PANTHER:PTHR31140	PANTHER:PTHR31140:SF19	SMART:SM01019
SUPFAM:SSF101936	UniParc:UPI0001A595E4	EnsemblPlantsGene:Zm00001d052591	EnsemblPlants:Zm00001d052591_P001	EnsemblPlants:Zm00001d052591_T001	SEG:seg

Description

ABI3-VP1-transcription factor 40B3 domain-containing protein

Coordinates

chr4:-:193980224..193982203

Molecular Weight (calculated)

34544.6 Da

IEP (calculated)

7.236

GRAVY (calculated)

-0.919

Length

307 amino acids

Sequence
(BLAST)

001: MATNHLSQGQ HQHPQAWPWG VAMYTNLHYH HQQHHHYEKE HLFEKPLTPS DVGKLNRLVI PKQHAERYFP LSSSGAGDKG LILCFEDDDD DEAAAANKPW
101: RFRYSYWTSS QSYVLTKGWS RYVKEKQLDA GDVVRFQRMR GFGMPDRLFI SHSRRGETTA TAATTVPPAA AAVRVVVAPA QSAGADHQQQ QQPSPWSPMC
201: YSTSGSYSYP TSSPANSQHA YHRHSADHDH SNNMQHAGES QSDRDNRSCS AASAPPPPSR RLRLFGVNLD CGPGPEPETP TAMYGYMHQS PYAYNNWGSP
301: YQHDEEI

Best Arabidopsis Sequence Match ( AT2G36080.1 )
(BLAST)

001: MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL NRLVIPKQHA ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS

Arabidopsis Description

ARF31B3 domain-containing protein At2g36080 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.