Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75073 | Canola | nucleus | 93.0 | 91.13 |
| Bra005301.1-P | Field mustard | nucleus | 92.59 | 90.73 |
| AT2G36080.1 | Thale cress | nucleus | 86.42 | 86.07 |
| CDY43751 | Canola | nucleus | 84.77 | 84.77 |
| CDX73868 | Canola | nucleus | 48.97 | 50.42 |
| CDY08512 | Canola | nucleus | 51.44 | 50.4 |
| CDY01036 | Canola | nucleus | 51.44 | 48.64 |
| CDY62470 | Canola | nucleus | 45.27 | 48.25 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 38.27 | 46.27 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 36.63 | 46.11 |
| CDY47260 | Canola | nucleus | 49.79 | 45.32 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 43.62 | 42.91 |
| TraesCS5B01G126200.1 | Wheat | nucleus | 46.5 | 42.64 |
| TraesCS5D01G134700.1 | Wheat | nucleus | 46.5 | 42.48 |
| TraesCS5A01G127100.1 | Wheat | nucleus | 46.5 | 42.48 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 41.98 | 42.15 |
| CDY67348 | Canola | nucleus | 25.93 | 42.0 |
| Os11t0156000-01 | Rice | nucleus | 48.15 | 41.94 |
| KRH67965 | Soybean | nucleus | 48.97 | 41.32 |
| CDX80996 | Canola | nucleus | 46.5 | 41.09 |
| TraesCS2A01G460700.1 | Wheat | nucleus | 44.86 | 40.98 |
| TraesCS2B01G482400.1 | Wheat | nucleus | 44.86 | 40.82 |
| TraesCS2D01G460900.1 | Wheat | nucleus | 44.86 | 40.82 |
| KXG27771 | Sorghum | nucleus | 45.68 | 40.51 |
| KRG96220 | Soybean | nucleus | 48.97 | 39.8 |
| TraesCS4A01G198300.2 | Wheat | nucleus | 44.86 | 39.07 |
| TraesCS4B01G117100.1 | Wheat | nucleus | 44.86 | 39.07 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 45.68 | 38.95 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 44.86 | 38.65 |
| KRH32791 | Soybean | nucleus | 53.5 | 38.58 |
| GSMUA_Achr11P... | Banana | nucleus | 29.22 | 38.38 |
| Zm00001d023446_P001 | Maize | nucleus | 44.44 | 38.16 |
| CDY70080 | Canola | nucleus | 37.04 | 37.66 |
| CDX98911 | Canola | nucleus | 37.04 | 37.66 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 25.1 | 37.65 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 43.21 | 37.63 |
| KRH72242 | Soybean | nucleus | 51.85 | 36.63 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 41.15 | 36.5 |
| CDY43060 | Canola | cytosol | 24.28 | 36.2 |
| Zm00001d052591_P001 | Maize | nucleus | 44.86 | 35.5 |
| KXG22988 | Sorghum | plastid | 45.68 | 34.69 |
| Solyc09g010230.1.1 | Tomato | nucleus | 47.74 | 33.62 |
| PGSC0003DMT400023077 | Potato | nucleus | 45.27 | 32.84 |
| CDY69432 | Canola | nucleus | 36.21 | 31.65 |
| CDY48008 | Canola | nucleus | 38.68 | 30.92 |
| CDX67872 | Canola | nucleus | 36.21 | 30.88 |
| CDX80053 | Canola | nucleus | 37.45 | 30.64 |
| CDY41564 | Canola | nucleus | 37.45 | 30.64 |
| CDY27515 | Canola | nucleus | 38.27 | 30.59 |
| CDX83351 | Canola | nucleus | 37.45 | 29.55 |
| CDY50908 | Canola | nucleus | 38.27 | 29.52 |
| CDY11388 | Canola | nucleus | 34.98 | 29.11 |
| CDX76605 | Canola | nucleus | 34.98 | 29.11 |
| CDX97996 | Canola | nucleus | 36.63 | 27.38 |
| CDY58763 | Canola | nucleus | 35.8 | 27.36 |
| CDY61361 | Canola | nucleus | 36.63 | 27.22 |
| CDY58764 | Canola | nucleus | 35.8 | 27.19 |
| CDY58354 | Canola | nucleus | 36.21 | 26.99 |
| CDY72302 | Canola | nucleus | 36.21 | 26.99 |
| Os12t0157000-01 | Rice | cytosol, nucleus | 22.63 | 26.19 |
| CDX90001 | Canola | nucleus | 37.04 | 26.16 |
| CDY15208 | Canola | nucleus | 34.16 | 25.78 |
| CDY40973 | Canola | nucleus | 33.33 | 25.71 |
| CDY24391 | Canola | nucleus | 34.16 | 24.56 |
| CDX81561 | Canola | nucleus | 34.57 | 24.49 |
| CDY45849 | Canola | nucleus, plastid | 34.98 | 24.29 |
| CDY36099 | Canola | nucleus | 34.16 | 23.71 |
| CDX99755 | Canola | nucleus | 32.92 | 23.53 |
| CDX97251 | Canola | nucleus | 32.51 | 23.3 |
| CDY07140 | Canola | nucleus | 29.22 | 23.2 |
| CDX84999 | Canola | nucleus | 33.74 | 23.16 |
| CDY49614 | Canola | nucleus | 29.22 | 22.9 |
| CDY16133 | Canola | nucleus | 33.33 | 22.63 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 30.45 | 21.76 |
| CDY29599 | Canola | nucleus | 26.34 | 19.69 |
| CDX83547 | Canola | nucleus | 25.93 | 19.44 |
| CDY65812 | Canola | nucleus | 22.22 | 19.22 |
| CDY22814 | Canola | nucleus | 25.51 | 18.4 |
| CDY37109 | Canola | nucleus | 25.1 | 18.32 |
| CDY37130 | Canola | nucleus | 25.1 | 17.99 |
| CDY22826 | Canola | nucleus | 24.28 | 17.46 |
| CDY29620 | Canola | nucleus | 24.69 | 17.44 |
| CDY46564 | Canola | nucleus | 24.28 | 17.4 |
| CDY51249 | Canola | nucleus | 24.28 | 17.4 |
| CDY35575 | Canola | nucleus | 24.28 | 17.1 |
| CDY25209 | Canola | nucleus | 23.87 | 16.34 |
| CDY37108 | Canola | nucleus, plastid | 22.63 | 16.04 |
| CDY22801 | Canola | nucleus | 22.22 | 15.52 |
Protein Annotations
| EnsemblPlants:CDX84162 | EnsemblPlantsGene:GSBRNA2T00141192001 | Gene3D:2.40.330.10 | GO:A0A078D4V9 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | InterPro:IPR003340 | InterPro:IPR015300 |
| PANTHER:PTHR31140 | PANTHER:PTHR31140:SF2 | PFAM:PF02362 | PFscan:PS50863 | ProteinID:CDX84162 | ProteinID:CDX84162.1 |
| SEG:seg | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EE38A0 | MapMan:15.5.5.3 | : |
Description
BnaC04g09240D
Coordinates
chrLK031836:+:348014..349787
Molecular Weight (calculated)
28432.1 Da
IEP (calculated)
8.138
GRAVY (calculated)
-0.814
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MSINQYSSDF NYHHSLMWQQ QQHPHHHHQN NVVEEKEALF EKPLTPSDVG KLNRLVIPKQ HAERYFPLAA AAADAMEKGL LLCFEDEEGK PWRFRYSYWN
101: SSQSYVLTKG WSRYVKEKQL DAGDVILFHR HRVDGGRFFI GWRRRGNSSS SSDSYRHLQS DASLQYYPHA GAQAVESQRG NSKTLRLFGV NMECQLDSHL
201: SDPSTPDGST LCPTSHDQFH LYPQQHYPPP YYMVRFNIVY YFK
101: SSQSYVLTKG WSRYVKEKQL DAGDVILFHR HRVDGGRFFI GWRRRGNSSS SSDSYRHLQS DASLQYYPHA GAQAVESQRG NSKTLRLFGV NMECQLDSHL
201: SDPSTPDGST LCPTSHDQFH LYPQQHYPPP YYMVRFNIVY YFK
001: MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL NRLVIPKQHA ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMVR
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMVR
Arabidopsis Description
ARF31B3 domain-containing protein At2g36080 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.