Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36099 | Canola | nucleus | 92.6 | 89.43 |
| CDX84999 | Canola | nucleus | 86.98 | 83.05 |
| CDY16133 | Canola | nucleus | 85.21 | 80.45 |
| AT1G25560.1 | Thale cress | nucleus | 82.25 | 77.01 |
| CDX81561 | Canola | nucleus | 70.71 | 69.68 |
| CDY45849 | Canola | nucleus, plastid | 70.41 | 68.0 |
| CDX97996 | Canola | nucleus | 63.91 | 66.46 |
| CDY61361 | Canola | nucleus | 63.61 | 65.75 |
| CDY72302 | Canola | nucleus | 63.02 | 65.34 |
| CDY58354 | Canola | nucleus | 62.43 | 64.72 |
| CDY40973 | Canola | nucleus | 57.4 | 61.59 |
| KRH34761 | Soybean | nucleus | 61.83 | 59.54 |
| CDX99755 | Canola | nucleus | 59.76 | 59.41 |
| GSMUA_Achr5P09950_001 | Banana | nucleus | 56.21 | 59.01 |
| VIT_01s0011g03070.t01 | Wine grape | nucleus | 65.68 | 58.73 |
| CDX83547 | Canola | nucleus | 55.62 | 58.02 |
| GSMUA_Achr1P05400_001 | Banana | nucleus | 50.0 | 56.71 |
| KRG92025 | Soybean | nucleus | 60.65 | 56.63 |
| KRH75484 | Soybean | nucleus | 63.91 | 56.25 |
| KRH70603 | Soybean | nucleus | 64.79 | 54.61 |
| PGSC0003DMT400002125 | Potato | nucleus | 64.2 | 54.52 |
| Solyc05g009790.1.1 | Tomato | nucleus | 63.61 | 54.43 |
| GSMUA_Achr3P29380_001 | Banana | nucleus | 42.01 | 53.99 |
| GSMUA_Achr4P03670_001 | Banana | nucleus | 46.75 | 53.74 |
| GSMUA_Achr6P09880_001 | Banana | nucleus | 44.97 | 52.6 |
| GSMUA_Achr10P... | Banana | nucleus | 45.27 | 52.4 |
| TraesCS3D01G260100.1 | Wheat | nucleus | 57.1 | 51.6 |
| GSMUA_Achr2P22560_001 | Banana | nucleus | 47.04 | 51.29 |
| TraesCS3A01G259900.1 | Wheat | nucleus | 56.8 | 51.2 |
| TraesCS3B01G293000.1 | Wheat | nucleus | 57.69 | 50.91 |
| GSMUA_Achr4P06710_001 | Banana | nucleus | 51.18 | 49.43 |
| Zm00001d043782_P001 | Maize | nucleus | 56.51 | 49.1 |
| HORVU3Hr1G064640.4 | Barley | nucleus | 55.03 | 48.95 |
| Os05t0549800-01 | Rice | nucleus | 49.41 | 48.69 |
| HORVU4Hr1G074300.4 | Barley | nucleus | 21.6 | 48.67 |
| Os01t0693400-01 | Rice | nucleus | 56.51 | 48.6 |
| HORVU3Hr1G064590.1 | Barley | nucleus | 27.81 | 48.45 |
| Zm00001d009468_P001 | Maize | nucleus, plastid | 53.55 | 48.27 |
| TraesCS1A01G372300.1 | Wheat | nucleus | 55.03 | 47.45 |
| GSMUA_AchrUn_... | Banana | nucleus | 52.37 | 47.33 |
| TraesCS1B01G392300.1 | Wheat | nucleus | 54.73 | 47.31 |
| TraesCS1D01G378900.1 | Wheat | nucleus | 54.73 | 47.19 |
| HORVU1Hr1G082670.6 | Barley | nucleus | 54.73 | 47.07 |
| GSMUA_Achr9P21470_001 | Banana | nucleus | 42.6 | 46.45 |
| KXG22484 | Sorghum | nucleus, plastid | 55.92 | 46.32 |
| EES03472 | Sorghum | nucleus, plastid | 56.51 | 46.25 |
| Zm00001d038907_P001 | Maize | nucleus, plastid | 55.33 | 46.06 |
| Zm00001d011639_P001 | Maize | nucleus | 54.73 | 45.68 |
| TraesCS1B01G392000.1 | Wheat | nucleus | 55.03 | 45.26 |
| TraesCS1D01G378400.1 | Wheat | nucleus | 54.14 | 44.42 |
| TraesCS1A01G372200.1 | Wheat | nucleus | 54.14 | 44.31 |
| TraesCS1D01G378500.1 | Wheat | nucleus | 54.73 | 44.15 |
| TraesCS1D01G378800.1 | Wheat | nucleus | 53.55 | 43.61 |
| TraesCS1B01G392200.1 | Wheat | nucleus, plastid | 53.55 | 43.51 |
| CDY67348 | Canola | nucleus | 19.23 | 43.33 |
| TraesCS1A01G372100.1 | Wheat | nucleus | 53.55 | 40.95 |
| GSMUA_Achr3P21100_001 | Banana | nucleus | 47.93 | 39.32 |
| CDY43751 | Canola | nucleus | 25.44 | 35.39 |
| CDX73868 | Canola | nucleus | 24.56 | 35.17 |
| CDY62470 | Canola | nucleus | 23.37 | 34.65 |
| CDX84162 | Canola | nucleus | 24.56 | 34.16 |
| CDX75073 | Canola | nucleus | 24.85 | 33.87 |
| CDY43060 | Canola | cytosol | 16.27 | 33.74 |
| CDY08512 | Canola | nucleus | 24.56 | 33.47 |
| CDY01036 | Canola | nucleus | 24.85 | 32.68 |
| CDY37109 | Canola | nucleus | 30.18 | 30.63 |
| CDY29620 | Canola | nucleus | 31.07 | 30.52 |
| CDY22826 | Canola | nucleus | 30.47 | 30.47 |
| CDY29599 | Canola | nucleus | 29.29 | 30.46 |
| CDY35575 | Canola | nucleus | 31.07 | 30.43 |
| CDY47260 | Canola | nucleus | 23.96 | 30.34 |
| CDY65812 | Canola | nucleus | 25.15 | 30.25 |
| CDY69432 | Canola | nucleus | 24.85 | 30.22 |
| CDY46564 | Canola | nucleus | 30.18 | 30.09 |
| CDY22814 | Canola | nucleus | 29.88 | 29.97 |
| CDX67872 | Canola | nucleus | 25.15 | 29.82 |
| CDY37130 | Canola | nucleus | 29.88 | 29.79 |
| CDY51249 | Canola | nucleus | 29.88 | 29.79 |
| CDY11388 | Canola | nucleus | 25.15 | 29.11 |
| CDX76605 | Canola | nucleus | 25.15 | 29.11 |
| CDX80996 | Canola | nucleus | 23.67 | 29.09 |
| CDY25209 | Canola | nucleus | 30.47 | 29.01 |
| CDY27515 | Canola | nucleus | 25.44 | 28.29 |
| CDY48008 | Canola | nucleus | 25.44 | 28.29 |
| CDX80053 | Canola | nucleus | 24.85 | 28.28 |
| CDY41564 | Canola | nucleus | 24.85 | 28.28 |
| CDY15208 | Canola | nucleus | 26.63 | 27.95 |
| CDX83351 | Canola | nucleus | 25.44 | 27.92 |
| CDY37108 | Canola | nucleus, plastid | 28.11 | 27.7 |
| CDY22801 | Canola | nucleus | 28.4 | 27.59 |
| CDY50908 | Canola | nucleus | 25.44 | 27.3 |
| CDY58763 | Canola | nucleus | 25.15 | 26.73 |
| CDY58764 | Canola | nucleus | 25.15 | 26.56 |
| CDX90001 | Canola | nucleus | 26.92 | 26.45 |
| CDX97251 | Canola | nucleus | 24.85 | 24.78 |
| CDY07140 | Canola | nucleus | 21.6 | 23.86 |
| CDY49614 | Canola | nucleus | 21.3 | 23.23 |
| CDY70080 | Canola | nucleus | 15.38 | 21.76 |
| CDX98911 | Canola | nucleus | 15.38 | 21.76 |
Protein Annotations
| MapMan:15.5.5.3 | MapMan:15.5.7.5 | Gene3D:2.40.330.10 | Gene3D:3.30.730.10 | GO:A0A078GG81 | UniProt:A0A078GG81 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:B3_DNA-bd | EnsemblPlants:CDY24391 | ProteinID:CDY24391 | ProteinID:CDY24391.1 |
| InterPro:DNA-bd_dom_sf | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00026623001 | InterPro:IPR001471 | InterPro:IPR003340 | InterPro:IPR015300 | InterPro:IPR036955 | PFAM:PF00847 |
| PFAM:PF02362 | PFscan:PS50863 | PFscan:PS51032 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF9 | SMART:SM00380 |
| SMART:SM01019 | SUPFAM:SSF101936 | SUPFAM:SSF54171 | UniParc:UPI0004EEE2F8 | SEG:seg | : |
Description
BnaCnng04580DBnaCnng04580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GG81]
Coordinates
chrLK032158:+:129705..130763
Molecular Weight (calculated)
37992.7 Da
IEP (calculated)
9.865
GRAVY (calculated)
-0.650
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYSCIDDNT SNTSETLSMS KKTPPQATMR LYRMGSGGSS VVLDLENGVE TESSRKLPSS KFKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEEEAAASYD
101: IAARRFRGRD AVTNFKSPSS DAESAFLEAH SKAEIVDMLR KHTYADELRQ SERKFLDGDG NGKKRREEVL FEKAVTPSDV GKLNRLVIPK QHAEKHFPLP
201: VSVTPSPTKG VLINLEDRTG KVWRFRYSYW NSSQSYVLTK GWSRFVKEKN LRAGDVVCFE RSSGPDQQLY IDWKVRSGIE KTTSVQTVVR LFGVNIFNAT
301: TNANTNDAVG ESSSKKRSRE VDLFALGCSK KQAIINVL
101: IAARRFRGRD AVTNFKSPSS DAESAFLEAH SKAEIVDMLR KHTYADELRQ SERKFLDGDG NGKKRREEVL FEKAVTPSDV GKLNRLVIPK QHAEKHFPLP
201: VSVTPSPTKG VLINLEDRTG KVWRFRYSYW NSSQSYVLTK GWSRFVKEKN LRAGDVVCFE RSSGPDQQLY IDWKVRSGIE KTTSVQTVVR LFGVNIFNAT
301: TNANTNDAVG ESSSKKRSRE VDLFALGCSK KQAIINVL
001: MEYSCVDDSS TTSESLSIST TPKPTTTTEK KLSSPPATSM RLYRMGSGGS SVVLDSENGV ETESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN
101: EEEEAASSYD IAVRRFRGRD AVTNFKSQVD GNDAESAFLD AHSKAEIVDM LRKHTYADEF EQSRRKFVNG DGKRSGLETA TYGNDAVLRA REVLFEKTVT
201: PSDVGKLNRL VIPKQHAEKH FPLPAMTTAM GMNPSPTKGV LINLEDRTGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVCFER STGPDRQLYI
301: HWKVRSSPVQ TVVRLFGVNI FNVSNEKPND VAVECVGKKR SREDDLFSLG CSKKQAIINI L
101: EEEEAASSYD IAVRRFRGRD AVTNFKSQVD GNDAESAFLD AHSKAEIVDM LRKHTYADEF EQSRRKFVNG DGKRSGLETA TYGNDAVLRA REVLFEKTVT
201: PSDVGKLNRL VIPKQHAEKH FPLPAMTTAM GMNPSPTKGV LINLEDRTGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVCFER STGPDRQLYI
301: HWKVRSSPVQ TVVRLFGVNI FNVSNEKPND VAVECVGKKR SREDDLFSLG CSKKQAIINI L
Arabidopsis Description
TEM1AP2/ERF and B3 domain-containing transcription repressor TEM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6M5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.