Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra001411.1-P | Field mustard | nucleus | 100.0 | 100.0 |
CDY01036 | Canola | nucleus | 82.2 | 75.49 |
CDY08512 | Canola | nucleus | 78.81 | 75.0 |
CDY62470 | Canola | nucleus | 69.07 | 71.49 |
CDY47260 | Canola | nucleus | 61.86 | 54.68 |
AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 82.2 | 52.29 |
CDY43751 | Canola | nucleus | 50.42 | 48.97 |
CDX84162 | Canola | nucleus | 50.42 | 48.97 |
CDX75073 | Canola | nucleus | 50.0 | 47.58 |
CDY70080 | Canola | nucleus | 46.19 | 45.61 |
CDX98911 | Canola | nucleus | 46.19 | 45.61 |
GSMUA_Achr9P02600_001 | Banana | nucleus | 37.29 | 45.6 |
CDX80996 | Canola | nucleus | 52.12 | 44.73 |
GSMUA_Achr3P19210_001 | Banana | nucleus | 37.29 | 43.78 |
GSMUA_Achr6P35600_001 | Banana | nucleus | 42.8 | 41.74 |
GSMUA_Achr6P13140_001 | Banana | nucleus | 42.37 | 40.49 |
TraesCS5B01G126200.1 | Wheat | nucleus | 45.34 | 40.38 |
TraesCS5D01G134700.1 | Wheat | nucleus | 45.34 | 40.23 |
TraesCS5A01G127100.1 | Wheat | nucleus | 44.49 | 39.47 |
TraesCS2A01G460700.1 | Wheat | nucleus | 44.07 | 39.1 |
KXG27771 | Sorghum | nucleus | 44.92 | 38.69 |
TraesCS2B01G482400.1 | Wheat | nucleus | 43.64 | 38.58 |
TraesCS4A01G198300.2 | Wheat | nucleus | 45.34 | 38.35 |
CDY67348 | Canola | nucleus | 24.15 | 38.0 |
TraesCS4B01G117100.1 | Wheat | nucleus | 44.92 | 37.99 |
TraesCS2D01G460900.1 | Wheat | nucleus | 42.8 | 37.83 |
HORVU4Hr1G021650.22 | Barley | nucleus | 44.49 | 37.63 |
TraesCS4D01G114900.1 | Wheat | nucleus | 44.92 | 37.59 |
GSMUA_Achr9P08980_001 | Banana | nucleus | 25.42 | 37.04 |
Os11t0156000-01 | Rice | nucleus | 43.64 | 36.92 |
VIT_08s0007g02810.t01 | Wine grape | nucleus | 44.49 | 36.84 |
KRH67965 | Soybean | nucleus | 44.92 | 36.81 |
GSMUA_Achr11P... | Banana | nucleus | 28.81 | 36.76 |
HORVU5Hr1G040620.4 | Barley | nucleus | 41.1 | 35.4 |
KRG96220 | Soybean | nucleus | 44.49 | 35.12 |
Zm00001d023446_P001 | Maize | nucleus | 41.95 | 34.98 |
KRH32791 | Soybean | nucleus | 49.15 | 34.42 |
KRH72242 | Soybean | nucleus | 50.0 | 34.3 |
Solyc09g010230.1.1 | Tomato | nucleus | 49.58 | 33.91 |
Zm00001d052591_P001 | Maize | nucleus | 44.07 | 33.88 |
KXG22988 | Sorghum | plastid | 45.34 | 33.44 |
PGSC0003DMT400023077 | Potato | nucleus | 47.03 | 33.13 |
CDY43060 | Canola | cytosol | 22.88 | 33.13 |
CDY48008 | Canola | nucleus | 39.41 | 30.59 |
CDX80053 | Canola | nucleus | 38.14 | 30.3 |
CDY41564 | Canola | nucleus | 38.14 | 30.3 |
CDY27515 | Canola | nucleus | 38.98 | 30.26 |
CDY69432 | Canola | nucleus | 34.75 | 29.5 |
CDX76605 | Canola | nucleus | 36.44 | 29.45 |
CDY11388 | Canola | nucleus | 36.44 | 29.45 |
CDY50908 | Canola | nucleus | 38.98 | 29.21 |
CDX83351 | Canola | nucleus | 37.71 | 28.9 |
CDX67872 | Canola | nucleus | 34.32 | 28.42 |
CDY58763 | Canola | nucleus | 35.17 | 26.1 |
CDY58764 | Canola | nucleus | 35.17 | 25.94 |
CDY15208 | Canola | nucleus | 35.17 | 25.78 |
Os12t0157000-01 | Rice | cytosol, nucleus | 22.88 | 25.71 |
CDY72302 | Canola | nucleus | 35.17 | 25.46 |
CDY58354 | Canola | nucleus | 35.17 | 25.46 |
CDX90001 | Canola | nucleus | 36.86 | 25.29 |
CDX97996 | Canola | nucleus | 34.75 | 25.23 |
CDY61361 | Canola | nucleus | 34.75 | 25.08 |
CDY40973 | Canola | nucleus | 33.05 | 24.76 |
CDY24391 | Canola | nucleus | 35.17 | 24.56 |
CDX81561 | Canola | nucleus | 35.59 | 24.49 |
CDY45849 | Canola | nucleus, plastid | 36.02 | 24.29 |
CDY36099 | Canola | nucleus | 35.59 | 24.0 |
CDX84999 | Canola | nucleus | 34.75 | 23.16 |
CDX99755 | Canola | nucleus | 32.63 | 22.65 |
CDY16133 | Canola | nucleus | 34.32 | 22.63 |
CDY07140 | Canola | nucleus | 28.81 | 22.22 |
CDX97251 | Canola | nucleus | 31.78 | 22.12 |
CDY49614 | Canola | nucleus | 28.81 | 21.94 |
GSMUA_Achr6P18320_001 | Banana | nucleus | 30.51 | 21.18 |
CDX83547 | Canola | nucleus | 25.0 | 18.21 |
CDY29599 | Canola | nucleus | 24.58 | 17.85 |
CDY46564 | Canola | nucleus | 25.42 | 17.7 |
CDY51249 | Canola | nucleus | 25.42 | 17.7 |
CDY65812 | Canola | nucleus | 20.76 | 17.44 |
CDY22826 | Canola | nucleus | 24.58 | 17.16 |
CDY29620 | Canola | nucleus | 25.0 | 17.15 |
CDY37109 | Canola | nucleus | 24.15 | 17.12 |
CDY22814 | Canola | nucleus | 24.15 | 16.91 |
CDY37130 | Canola | nucleus | 24.15 | 16.81 |
CDY35575 | Canola | nucleus | 24.58 | 16.81 |
CDY25209 | Canola | nucleus | 24.15 | 16.06 |
CDY22801 | Canola | nucleus | 22.46 | 15.23 |
CDY37108 | Canola | nucleus, plastid | 21.61 | 14.87 |
Protein Annotations
EnsemblPlants:CDX73868 | EnsemblPlantsGene:GSBRNA2T00111579001 | Gene3D:2.40.330.10 | GO:A0A078CFS3 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0005488 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | InterPro:IPR003340 | InterPro:IPR015300 |
PANTHER:PTHR31140 | PANTHER:PTHR31140:SF2 | PFAM:PF02362 | PFscan:PS50863 | ProteinID:CDX73868 | ProteinID:CDX73868.1 |
SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0002540720 | MapMan:15.5.5.3 | : | : |
Description
BnaA03g31790D
Coordinates
chrLK031800:+:310515..311984
Molecular Weight (calculated)
26841.1 Da
IEP (calculated)
7.767
GRAVY (calculated)
-0.690
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGNHYSRDI HHNTLSLHPH QNDTASHKES LFEKSLTPSD VGKLNRLVIP KQHAEKYLPL NNGGGEVTSE TTEKGMLLSF EDESGKCWKF RYSYWNSSQS
101: YVLTKGWSKY VKDKHLDAGD VVFFQRHRFD FHRLFIGWRR RGEASSLSAV SQEARVNTTA YWSGLTTPYR QVEASTSSYP NIHQEYSQYG AVAETPTVVA
201: GTSRTVRLFG VNLECHGDVV EPPPCSDGYN GQHIYY
101: YVLTKGWSKY VKDKHLDAGD VVFFQRHRFD FHRLFIGWRR RGEASSLSAV SQEARVNTTA YWSGLTTPYR QVEASTSSYP NIHQEYSQYG AVAETPTVVA
201: GTSRTVRLFG VNLECHGDVV EPPPCSDGYN GQHIYY
001: MSVNHYHNTL SLHHHHQNDV AIAQRESLFE KSLTPSDVGK LNRLVIPKQH AEKYFPLNNN NNNGGSGDDV ATTEKGMLLS FEDESGKCWK FRYSYWNSSQ
101: SYVLTKGWSR YVKDKHLDAG DVVFFQRHRF DLHRLFIGWR RRGEASSSPA VSVVSQEALV NTTAYWSGLT TPYRQVHAST TYPNIHQEYS HYGAVVDHAQ
201: SIPPVVAGSS RTVRLFGVNL ECHGDAVEPP PRPDVYNDQH IYYYSTPHPM VNIFFFYIFV RFKFLLTYDI IIKQMSWLFL ETRQMKISNF KIDLKEIFMF
301: NKLYKGGIRE NNTIHLTVKP HGQFGFYLIT LICFVYSFVS VASFCSLINI SRKYIVSCEN SLYFGFTILI C
101: SYVLTKGWSR YVKDKHLDAG DVVFFQRHRF DLHRLFIGWR RRGEASSSPA VSVVSQEALV NTTAYWSGLT TPYRQVHAST TYPNIHQEYS HYGAVVDHAQ
201: SIPPVVAGSS RTVRLFGVNL ECHGDAVEPP PRPDVYNDQH IYYYSTPHPM VNIFFFYIFV RFKFLLTYDI IIKQMSWLFL ETRQMKISNF KIDLKEIFMF
301: NKLYKGGIRE NNTIHLTVKP HGQFGFYLIT LICFVYSFVS VASFCSLINI SRKYIVSCEN SLYFGFTILI C
Arabidopsis Description
AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LT60]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.