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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001411.1-P Field mustard nucleus 100.0 100.0
CDY01036 Canola nucleus 82.2 75.49
CDY08512 Canola nucleus 78.81 75.0
CDY62470 Canola nucleus 69.07 71.49
CDY47260 Canola nucleus 61.86 54.68
AT3G11580.3 Thale cress cytosol, endoplasmic reticulum, nucleus 82.2 52.29
CDY43751 Canola nucleus 50.42 48.97
CDX84162 Canola nucleus 50.42 48.97
CDX75073 Canola nucleus 50.0 47.58
CDY70080 Canola nucleus 46.19 45.61
CDX98911 Canola nucleus 46.19 45.61
GSMUA_Achr9P02600_001 Banana nucleus 37.29 45.6
CDX80996 Canola nucleus 52.12 44.73
GSMUA_Achr3P19210_001 Banana nucleus 37.29 43.78
GSMUA_Achr6P35600_001 Banana nucleus 42.8 41.74
GSMUA_Achr6P13140_001 Banana nucleus 42.37 40.49
TraesCS5B01G126200.1 Wheat nucleus 45.34 40.38
TraesCS5D01G134700.1 Wheat nucleus 45.34 40.23
TraesCS5A01G127100.1 Wheat nucleus 44.49 39.47
TraesCS2A01G460700.1 Wheat nucleus 44.07 39.1
KXG27771 Sorghum nucleus 44.92 38.69
TraesCS2B01G482400.1 Wheat nucleus 43.64 38.58
TraesCS4A01G198300.2 Wheat nucleus 45.34 38.35
CDY67348 Canola nucleus 24.15 38.0
TraesCS4B01G117100.1 Wheat nucleus 44.92 37.99
TraesCS2D01G460900.1 Wheat nucleus 42.8 37.83
HORVU4Hr1G021650.22 Barley nucleus 44.49 37.63
TraesCS4D01G114900.1 Wheat nucleus 44.92 37.59
GSMUA_Achr9P08980_001 Banana nucleus 25.42 37.04
Os11t0156000-01 Rice nucleus 43.64 36.92
VIT_08s0007g02810.t01 Wine grape nucleus 44.49 36.84
KRH67965 Soybean nucleus 44.92 36.81
GSMUA_Achr11P... Banana nucleus 28.81 36.76
HORVU5Hr1G040620.4 Barley nucleus 41.1 35.4
KRG96220 Soybean nucleus 44.49 35.12
Zm00001d023446_P001 Maize nucleus 41.95 34.98
KRH32791 Soybean nucleus 49.15 34.42
KRH72242 Soybean nucleus 50.0 34.3
Solyc09g010230.1.1 Tomato nucleus 49.58 33.91
Zm00001d052591_P001 Maize nucleus 44.07 33.88
KXG22988 Sorghum plastid 45.34 33.44
PGSC0003DMT400023077 Potato nucleus 47.03 33.13
CDY43060 Canola cytosol 22.88 33.13
CDY48008 Canola nucleus 39.41 30.59
CDX80053 Canola nucleus 38.14 30.3
CDY41564 Canola nucleus 38.14 30.3
CDY27515 Canola nucleus 38.98 30.26
CDY69432 Canola nucleus 34.75 29.5
CDX76605 Canola nucleus 36.44 29.45
CDY11388 Canola nucleus 36.44 29.45
CDY50908 Canola nucleus 38.98 29.21
CDX83351 Canola nucleus 37.71 28.9
CDX67872 Canola nucleus 34.32 28.42
CDY58763 Canola nucleus 35.17 26.1
CDY58764 Canola nucleus 35.17 25.94
CDY15208 Canola nucleus 35.17 25.78
Os12t0157000-01 Rice cytosol, nucleus 22.88 25.71
CDY72302 Canola nucleus 35.17 25.46
CDY58354 Canola nucleus 35.17 25.46
CDX90001 Canola nucleus 36.86 25.29
CDX97996 Canola nucleus 34.75 25.23
CDY61361 Canola nucleus 34.75 25.08
CDY40973 Canola nucleus 33.05 24.76
CDY24391 Canola nucleus 35.17 24.56
CDX81561 Canola nucleus 35.59 24.49
CDY45849 Canola nucleus, plastid 36.02 24.29
CDY36099 Canola nucleus 35.59 24.0
CDX84999 Canola nucleus 34.75 23.16
CDX99755 Canola nucleus 32.63 22.65
CDY16133 Canola nucleus 34.32 22.63
CDY07140 Canola nucleus 28.81 22.22
CDX97251 Canola nucleus 31.78 22.12
CDY49614 Canola nucleus 28.81 21.94
GSMUA_Achr6P18320_001 Banana nucleus 30.51 21.18
CDX83547 Canola nucleus 25.0 18.21
CDY29599 Canola nucleus 24.58 17.85
CDY46564 Canola nucleus 25.42 17.7
CDY51249 Canola nucleus 25.42 17.7
CDY65812 Canola nucleus 20.76 17.44
CDY22826 Canola nucleus 24.58 17.16
CDY29620 Canola nucleus 25.0 17.15
CDY37109 Canola nucleus 24.15 17.12
CDY22814 Canola nucleus 24.15 16.91
CDY37130 Canola nucleus 24.15 16.81
CDY35575 Canola nucleus 24.58 16.81
CDY25209 Canola nucleus 24.15 16.06
CDY22801 Canola nucleus 22.46 15.23
CDY37108 Canola nucleus, plastid 21.61 14.87
Protein Annotations
EnsemblPlants:CDX73868EnsemblPlantsGene:GSBRNA2T00111579001Gene3D:2.40.330.10GO:A0A078CFS3GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488InterPro:B3_DNA-bdInterPro:DNA-bd_pseudobarrel_sfInterPro:IPR003340InterPro:IPR015300
PANTHER:PTHR31140PANTHER:PTHR31140:SF2PFAM:PF02362PFscan:PS50863ProteinID:CDX73868ProteinID:CDX73868.1
SMART:SM01019SUPFAM:SSF101936UniParc:UPI0002540720MapMan:15.5.5.3::
Description
BnaA03g31790D
Coordinates
chrLK031800:+:310515..311984
Molecular Weight (calculated)
26841.1 Da
IEP (calculated)
7.767
GRAVY (calculated)
-0.690
Length
236 amino acids
Sequence
(BLAST)
001: MLGNHYSRDI HHNTLSLHPH QNDTASHKES LFEKSLTPSD VGKLNRLVIP KQHAEKYLPL NNGGGEVTSE TTEKGMLLSF EDESGKCWKF RYSYWNSSQS
101: YVLTKGWSKY VKDKHLDAGD VVFFQRHRFD FHRLFIGWRR RGEASSLSAV SQEARVNTTA YWSGLTTPYR QVEASTSSYP NIHQEYSQYG AVAETPTVVA
201: GTSRTVRLFG VNLECHGDVV EPPPCSDGYN GQHIYY
Best Arabidopsis Sequence Match ( AT3G11580.3 )
(BLAST)
001: MSVNHYHNTL SLHHHHQNDV AIAQRESLFE KSLTPSDVGK LNRLVIPKQH AEKYFPLNNN NNNGGSGDDV ATTEKGMLLS FEDESGKCWK FRYSYWNSSQ
101: SYVLTKGWSR YVKDKHLDAG DVVFFQRHRF DLHRLFIGWR RRGEASSSPA VSVVSQEALV NTTAYWSGLT TPYRQVHAST TYPNIHQEYS HYGAVVDHAQ
201: SIPPVVAGSS RTVRLFGVNL ECHGDAVEPP PRPDVYNDQH IYYYSTPHPM VNIFFFYIFV RFKFLLTYDI IIKQMSWLFL ETRQMKISNF KIDLKEIFMF
301: NKLYKGGIRE NNTIHLTVKP HGQFGFYLIT LICFVYSFVS VASFCSLINI SRKYIVSCEN SLYFGFTILI C
Arabidopsis Description
AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LT60]
SUBAcon: [endoplasmic reticulum,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.