Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005886.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY70080 | Canola | nucleus | 66.29 | 74.06 |
| CDX98911 | Canola | nucleus | 66.29 | 74.06 |
| CDX80996 | Canola | nucleus | 71.91 | 69.82 |
| CDX73868 | Canola | nucleus | 54.68 | 61.86 |
| CDY08512 | Canola | nucleus | 54.68 | 58.87 |
| CDY01036 | Canola | nucleus | 54.31 | 56.42 |
| CDY62470 | Canola | nucleus | 45.32 | 53.07 |
| CDY43751 | Canola | nucleus | 46.82 | 51.44 |
| CDX84162 | Canola | nucleus | 45.32 | 49.79 |
| CDX75073 | Canola | nucleus | 46.07 | 49.6 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 32.96 | 43.78 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 31.09 | 43.01 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 38.58 | 41.7 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 37.45 | 41.32 |
| TraesCS5B01G126200.1 | Wheat | nucleus | 40.45 | 40.75 |
| TraesCS5D01G134700.1 | Wheat | nucleus | 40.45 | 40.6 |
| TraesCS5A01G127100.1 | Wheat | nucleus | 40.07 | 40.23 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 42.7 | 40.0 |
| CDY67348 | Canola | nucleus | 22.47 | 40.0 |
| TraesCS2A01G460700.1 | Wheat | nucleus | 39.7 | 39.85 |
| TraesCS2B01G482400.1 | Wheat | nucleus | 39.7 | 39.7 |
| KXG27771 | Sorghum | nucleus | 40.07 | 39.05 |
| TraesCS2D01G460900.1 | Wheat | nucleus | 38.95 | 38.95 |
| KRH67965 | Soybean | nucleus | 41.95 | 38.89 |
| GSMUA_Achr11P... | Banana | nucleus | 26.22 | 37.84 |
| TraesCS4A01G198300.2 | Wheat | nucleus | 38.95 | 37.28 |
| Zm00001d023446_P001 | Maize | nucleus | 39.33 | 37.1 |
| TraesCS4B01G117100.1 | Wheat | nucleus | 38.58 | 36.92 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 38.95 | 36.88 |
| Os11t0156000-01 | Rice | nucleus | 38.2 | 36.56 |
| KRG96220 | Soybean | nucleus | 40.82 | 36.45 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 22.1 | 36.42 |
| KRH32791 | Soybean | nucleus | 45.69 | 36.2 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 37.45 | 35.84 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 36.7 | 35.77 |
| KRH72242 | Soybean | nucleus | 46.07 | 35.76 |
| CDY43060 | Canola | cytosol | 21.35 | 34.97 |
| Solyc09g010230.1.1 | Tomato | nucleus | 44.19 | 34.2 |
| PGSC0003DMT400023077 | Potato | nucleus | 42.7 | 34.03 |
| Zm00001d052591_P001 | Maize | nucleus | 38.95 | 33.88 |
| KXG22988 | Sorghum | plastid | 38.2 | 31.88 |
| CDY48008 | Canola | nucleus | 35.21 | 30.92 |
| CDY27515 | Canola | nucleus | 34.83 | 30.59 |
| CDY41564 | Canola | nucleus | 33.71 | 30.3 |
| CDX80053 | Canola | nucleus | 33.71 | 30.3 |
| CDY69432 | Canola | nucleus | 31.46 | 30.22 |
| CDY50908 | Canola | nucleus | 35.58 | 30.16 |
| CDX83351 | Canola | nucleus | 34.46 | 29.87 |
| CDX67872 | Canola | nucleus | 31.46 | 29.47 |
| CDX76605 | Canola | nucleus | 31.84 | 29.11 |
| CDY11388 | Canola | nucleus | 31.84 | 29.11 |
| CDY58763 | Canola | nucleus | 31.84 | 26.73 |
| CDY58764 | Canola | nucleus | 31.84 | 26.56 |
| CDX90001 | Canola | nucleus | 33.33 | 25.87 |
| CDX97996 | Canola | nucleus | 31.46 | 25.85 |
| CDY72302 | Canola | nucleus | 31.46 | 25.77 |
| CDY58354 | Canola | nucleus | 31.46 | 25.77 |
| CDY61361 | Canola | nucleus | 31.46 | 25.69 |
| CDY15208 | Canola | nucleus | 30.34 | 25.16 |
| CDY40973 | Canola | nucleus | 29.21 | 24.76 |
| Os12t0157000-01 | Rice | cytosol, nucleus | 19.1 | 24.29 |
| CDX81561 | Canola | nucleus | 31.09 | 24.2 |
| CDY45849 | Canola | nucleus, plastid | 31.46 | 24.0 |
| CDY24391 | Canola | nucleus | 30.34 | 23.96 |
| CDY07140 | Canola | nucleus | 27.34 | 23.86 |
| CDY36099 | Canola | nucleus | 31.09 | 23.71 |
| CDY49614 | Canola | nucleus | 27.34 | 23.55 |
| CDX97251 | Canola | nucleus | 29.59 | 23.3 |
| CDX84999 | Canola | nucleus | 30.71 | 23.16 |
| CDX99755 | Canola | nucleus | 28.84 | 22.65 |
| CDY16133 | Canola | nucleus | 30.34 | 22.63 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 26.59 | 20.88 |
| CDY29599 | Canola | nucleus | 22.1 | 18.15 |
| CDX83547 | Canola | nucleus | 21.72 | 17.9 |
| CDY65812 | Canola | nucleus | 18.73 | 17.79 |
| CDY22814 | Canola | nucleus | 21.72 | 17.21 |
| CDY29620 | Canola | nucleus | 22.1 | 17.15 |
| CDY37130 | Canola | nucleus | 21.72 | 17.11 |
| CDY46564 | Canola | nucleus | 21.72 | 17.11 |
| CDY51249 | Canola | nucleus | 21.72 | 17.11 |
| CDY37109 | Canola | nucleus | 20.97 | 16.82 |
| CDY35575 | Canola | nucleus | 21.72 | 16.81 |
| CDY22826 | Canola | nucleus | 20.97 | 16.57 |
| CDY25209 | Canola | nucleus | 20.6 | 15.49 |
| CDY22801 | Canola | nucleus | 19.48 | 14.94 |
| CDY37108 | Canola | nucleus, plastid | 18.73 | 14.58 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | GO:A0A078I8L8 | UniProt:A0A078I8L8 | InterPro:B3_DNA-bd | EnsemblPlants:CDY47260 |
| ProteinID:CDY47260 | ProteinID:CDY47260.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00086985001 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF2 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI000253F5E4 | SEG:seg | : |
Description
BnaA02g29460DBnaA02g29460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8L8]
Coordinates
chrLK032704:+:175240..176502
Molecular Weight (calculated)
30350.6 Da
IEP (calculated)
6.845
GRAVY (calculated)
-0.817
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVNHYSTDH HQVHHHHTLF LQNLHTTDTS EPTTTAATSL REDQKEYLFE KSLTPSDVGK LNRLVIPKQH AEKYFPLNTI ISNNAEEKGM LLSFEDESGK
101: CWRFRYSYWN SSQSYVLTKG WSRYVKDKQL DPADVVFFQR QRSDSRRLFI GWRRRGQGSS SAANTTSYSS SMTAPPYSNY SNRPAHSEYS HYGAAVATAT
201: ETHFIPSSSA VGSSRTVRLF GVNLECQMDE DEGDDSVATA AAAECPRQDS YYDQNMYNYY TPHSSAS
101: CWRFRYSYWN SSQSYVLTKG WSRYVKDKQL DPADVVFFQR QRSDSRRLFI GWRRRGQGSS SAANTTSYSS SMTAPPYSNY SNRPAHSEYS HYGAAVATAT
201: ETHFIPSSSA VGSSRTVRLF GVNLECQMDE DEGDDSVATA AAAECPRQDS YYDQNMYNYY TPHSSAS
001: MSVNHYSTDH HHTLLWQQQQ HRHTTDTSET TTTATWLHDD LKESLFEKSL TPSDVGKLNR LVIPKQHAEK YFPLNAVLVS SAAADTSSSE KGMLLSFEDE
101: SGKSWRFRYS YWNSSQSYVL TKGWSRFVKD KQLDPGDVVF FQRHRSDSRR LFIGWRRRGQ GSSSSVAATN SAVNTSSMGA LSYHQIHATS NYSNPPSHSE
201: YSHYGAAVAT AAETHSTPSS SVVGSSRTVR LFGVNLECQM DENDGDDSVA VATTVESPDG YYGQNMYYYY SHPHNMVILT LL
101: SGKSWRFRYS YWNSSQSYVL TKGWSRFVKD KQLDPGDVVF FQRHRSDSRR LFIGWRRRGQ GSSSSVAATN SAVNTSSMGA LSYHQIHATS NYSNPPSHSE
201: YSHYGAAVAT AAETHSTPSS SVVGSSRTVR LFGVNLECQM DENDGDDSVA VATTVESPDG YYGQNMYYYY SHPHNMVILT LL
Arabidopsis Description
AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BF34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.