Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052591_P001 | Maize | nucleus | 85.4 | 76.22 |
| TraesCS4B01G117100.1 | Wheat | nucleus | 76.64 | 75.27 |
| TraesCS4A01G198300.2 | Wheat | nucleus | 75.91 | 74.55 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 76.64 | 74.47 |
| Os11t0156000-01 | Rice | nucleus | 73.36 | 72.04 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 64.96 | 63.8 |
| KXG22988 | Sorghum | plastid | 71.9 | 61.56 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 42.7 | 58.21 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 40.51 | 57.51 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 47.81 | 54.13 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 47.81 | 53.04 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 28.1 | 47.53 |
| AT2G36080.1 | Thale cress | nucleus | 41.24 | 46.31 |
| Bra017262.1-P | Field mustard | nucleus | 41.24 | 46.12 |
| CDY43751 | Canola | nucleus | 40.88 | 46.09 |
| CDX84162 | Canola | nucleus | 40.51 | 45.68 |
| CDX75073 | Canola | nucleus | 40.88 | 45.16 |
| Bra005301.1-P | Field mustard | nucleus | 40.88 | 45.16 |
| CDX73868 | Canola | nucleus | 38.69 | 44.92 |
| Bra001411.1-P | Field mustard | nucleus | 38.69 | 44.92 |
| CDY08512 | Canola | nucleus | 39.42 | 43.55 |
| CDY01036 | Canola | nucleus | 40.51 | 43.19 |
| Bra034828.1-P | Field mustard | nucleus | 40.15 | 42.64 |
| CDY62470 | Canola | nucleus | 34.67 | 41.67 |
| OQU77426 | Sorghum | nucleus | 24.45 | 41.61 |
| GSMUA_Achr11P... | Banana | nucleus | 27.74 | 41.08 |
| Bra041023.1-P | Field mustard | nucleus | 39.05 | 40.53 |
| CDY47260 | Canola | nucleus | 39.05 | 40.07 |
| Bra005886.1-P | Field mustard | nucleus | 39.05 | 40.07 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 41.61 | 40.0 |
| AT5G06250.4 | Thale cress | nucleus | 41.24 | 39.79 |
| KRG96220 | Soybean | nucleus | 41.61 | 38.13 |
| KRH67965 | Soybean | nucleus | 39.78 | 37.85 |
| KRH32791 | Soybean | nucleus | 45.99 | 37.39 |
| PGSC0003DMT400072354 | Potato | nucleus | 39.05 | 37.15 |
| KRH72242 | Soybean | nucleus | 45.62 | 36.34 |
| KXG19112 | Sorghum | nucleus | 27.01 | 36.1 |
| CDX80996 | Canola | nucleus | 36.13 | 36.0 |
| Solyc10g083210.1.1 | Tomato | nucleus | 39.42 | 35.06 |
| EER92015 | Sorghum | nucleus | 34.31 | 34.31 |
| PGSC0003DMT400023077 | Potato | nucleus | 40.88 | 33.43 |
| KXG19111 | Sorghum | nucleus | 28.83 | 33.19 |
| Solyc09g010230.1.1 | Tomato | nucleus | 41.61 | 33.04 |
| CDY70080 | Canola | nucleus | 27.01 | 30.96 |
| CDX98911 | Canola | nucleus | 27.01 | 30.96 |
| Bra009171.1-P | Field mustard | nucleus | 27.01 | 30.96 |
| OQU93364 | Sorghum | nucleus | 37.23 | 30.91 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 40.51 | 29.92 |
| EES13386 | Sorghum | nucleus | 27.37 | 29.64 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 32.85 | 26.47 |
| EES14747 | Sorghum | plastid | 25.18 | 24.73 |
| EES12712 | Sorghum | nucleus | 35.77 | 23.33 |
| KXG24821 | Sorghum | nucleus | 23.36 | 22.46 |
| EES07445 | Sorghum | nucleus | 35.4 | 22.35 |
| KXG22484 | Sorghum | nucleus, plastid | 33.21 | 22.3 |
| EES03472 | Sorghum | nucleus, plastid | 33.58 | 22.28 |
| EES02511 | Sorghum | nucleus | 29.56 | 20.88 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | EntrezGene:8058562 | InterPro:B3_DNA-bd | UniProt:C5Y515 | InterPro:DNA-bd_pseudobarrel_sf |
| ProteinID:EES08005.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR003340 | InterPro:IPR015300 |
| EnsemblPlants:KXG27771 | ProteinID:KXG27771 | ProteinID:KXG27771.1 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF19 | SMART:SM01019 | EnsemblPlantsGene:SORBI_3005G041400 | SUPFAM:SSF101936 | UniParc:UPI00081AD253 | RefSeq:XP_002449017.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:3828689..3830488
Molecular Weight (calculated)
30781.7 Da
IEP (calculated)
7.261
GRAVY (calculated)
-0.824
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMNHLSQEH PQAWPWGVAM YTNLHYQHHY EKEHLFEKPL TPSDVGKLNR LVIPKQHAER YFPLSGDSGE KGLILSFEDE AGKPWRFRYS YWTSSQSYVL
101: TKGWSRYVKE KQLDAGDVVH FERMRSFGMG DRLFISYRRH GESATVAAAP PPPPPPPAVR VVAPAQSTGG GEQQPWSPMC YSTSGSYPTS PANSHAYRHS
201: VDHDHSNMQH AGESQSDRDN RSCSAASAPS SRQLRLFGVN LDCGPGPELE PETPTAMYGY MHQSPYTSNN WSSP
101: TKGWSRYVKE KQLDAGDVVH FERMRSFGMG DRLFISYRRH GESATVAAAP PPPPPPPAVR VVAPAQSTGG GEQQPWSPMC YSTSGSYPTS PANSHAYRHS
201: VDHDHSNMQH AGESQSDRDN RSCSAASAPS SRQLRLFGVN LDCGPGPELE PETPTAMYGY MHQSPYTSNN WSSP
001: MSVNHYSTDH HHTLLWQQQQ HRHTTDTSET TTTATWLHDD LKESLFEKSL TPSDVGKLNR LVIPKQHAEK YFPLNAVLVS SAAADTSSSE KGMLLSFEDE
101: SGKSWRFRYS YWNSSQSYVL TKGWSRFVKD KQLDPGDVVF FQRHRSDSRR LFIGWRRRGQ GSSSSVAATN SAVNTSSMGA LSYHQIHATS NYSNPPSHSE
201: YSHYGAAVAT AAETHSTPSS SVVGSSRTVR LFGVNLECQM DENDGDDSVA VATTVESPDG YYGQNII
101: SGKSWRFRYS YWNSSQSYVL TKGWSRFVKD KQLDPGDVVF FQRHRSDSRR LFIGWRRRGQ GSSSSVAATN SAVNTSSMGA LSYHQIHATS NYSNPPSHSE
201: YSHYGAAVAT AAETHSTPSS SVVGSSRTVR LFGVNLECQM DENDGDDSVA VATTVESPDG YYGQNII
Arabidopsis Description
AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BF34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.