Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005301.1-P | Field mustard | nucleus | 99.19 | 99.19 |
| CDX84162 | Canola | nucleus | 91.13 | 93.0 |
| CDY43751 | Canola | nucleus | 87.5 | 89.3 |
| AT2G36080.1 | Thale cress | nucleus | 87.5 | 88.93 |
| CDY08512 | Canola | nucleus | 52.02 | 52.02 |
| CDX73868 | Canola | nucleus | 47.58 | 50.0 |
| CDY62470 | Canola | nucleus | 45.97 | 50.0 |
| CDY01036 | Canola | nucleus | 51.61 | 49.81 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 37.5 | 46.27 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 35.89 | 46.11 |
| CDY47260 | Canola | nucleus | 49.6 | 46.07 |
| TraesCS5B01G126200.1 | Wheat | nucleus | 46.37 | 43.4 |
| TraesCS5A01G127100.1 | Wheat | nucleus | 46.37 | 43.23 |
| TraesCS5D01G134700.1 | Wheat | nucleus | 46.37 | 43.23 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 42.74 | 42.91 |
| CDX80996 | Canola | nucleus | 47.58 | 42.91 |
| Os11t0156000-01 | Rice | nucleus | 47.58 | 42.29 |
| CDY67348 | Canola | nucleus | 25.4 | 42.0 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 40.73 | 41.74 |
| KRH67965 | Soybean | nucleus | 47.98 | 41.32 |
| TraesCS2B01G482400.1 | Wheat | nucleus | 44.35 | 41.2 |
| TraesCS2D01G460900.1 | Wheat | nucleus | 44.35 | 41.2 |
| TraesCS2A01G460700.1 | Wheat | nucleus | 43.95 | 40.98 |
| KXG27771 | Sorghum | nucleus | 45.16 | 40.88 |
| CDY70080 | Canola | nucleus | 38.71 | 40.17 |
| CDX98911 | Canola | nucleus | 38.71 | 40.17 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 45.97 | 40.0 |
| KRG96220 | Soybean | nucleus | 47.98 | 39.8 |
| TraesCS4A01G198300.2 | Wheat | nucleus | 44.76 | 39.78 |
| TraesCS4B01G117100.1 | Wheat | nucleus | 44.35 | 39.43 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 44.35 | 39.01 |
| Zm00001d023446_P001 | Maize | nucleus | 43.95 | 38.52 |
| GSMUA_Achr11P... | Banana | nucleus | 28.63 | 38.38 |
| KRH32791 | Soybean | nucleus | 52.02 | 38.28 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 24.6 | 37.65 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 42.34 | 37.63 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 41.13 | 37.23 |
| KRH72242 | Soybean | nucleus | 50.81 | 36.63 |
| CDY43060 | Canola | cytosol | 23.79 | 36.2 |
| Zm00001d052591_P001 | Maize | nucleus | 44.76 | 36.16 |
| KXG22988 | Sorghum | plastid | 45.16 | 35.0 |
| Solyc09g010230.1.1 | Tomato | nucleus | 48.39 | 34.78 |
| PGSC0003DMT400023077 | Potato | nucleus | 45.16 | 33.43 |
| CDY69432 | Canola | nucleus | 35.48 | 31.65 |
| CDX67872 | Canola | nucleus | 35.89 | 31.23 |
| CDY48008 | Canola | nucleus | 37.9 | 30.92 |
| CDX80053 | Canola | nucleus | 36.69 | 30.64 |
| CDY41564 | Canola | nucleus | 36.69 | 30.64 |
| CDY27515 | Canola | nucleus | 37.5 | 30.59 |
| CDX83351 | Canola | nucleus | 36.69 | 29.55 |
| CDY50908 | Canola | nucleus | 37.5 | 29.52 |
| CDY11388 | Canola | nucleus | 34.68 | 29.45 |
| CDX76605 | Canola | nucleus | 34.68 | 29.45 |
| CDY58763 | Canola | nucleus | 35.48 | 27.67 |
| CDY58764 | Canola | nucleus | 35.48 | 27.5 |
| CDX97996 | Canola | nucleus | 35.48 | 27.08 |
| CDY61361 | Canola | nucleus | 35.48 | 26.91 |
| CDY58354 | Canola | nucleus | 35.08 | 26.69 |
| CDY72302 | Canola | nucleus | 35.08 | 26.69 |
| Os12t0157000-01 | Rice | cytosol, nucleus | 22.58 | 26.67 |
| CDX90001 | Canola | nucleus | 36.69 | 26.45 |
| CDY15208 | Canola | nucleus | 33.87 | 26.09 |
| CDY40973 | Canola | nucleus | 32.66 | 25.71 |
| CDY24391 | Canola | nucleus | 33.87 | 24.85 |
| CDX81561 | Canola | nucleus | 34.27 | 24.78 |
| CDY45849 | Canola | nucleus, plastid | 34.68 | 24.57 |
| CDY36099 | Canola | nucleus | 33.47 | 23.71 |
| CDX97251 | Canola | nucleus | 32.26 | 23.6 |
| CDX99755 | Canola | nucleus | 32.26 | 23.53 |
| CDY07140 | Canola | nucleus | 29.03 | 23.53 |
| CDX84999 | Canola | nucleus | 33.47 | 23.45 |
| CDY49614 | Canola | nucleus | 29.03 | 23.23 |
| CDY16133 | Canola | nucleus | 33.06 | 22.91 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 30.24 | 22.06 |
| CDY29599 | Canola | nucleus | 25.81 | 19.69 |
| CDX83547 | Canola | nucleus | 25.4 | 19.44 |
| CDY65812 | Canola | nucleus | 21.77 | 19.22 |
| CDY22814 | Canola | nucleus | 25.0 | 18.4 |
| CDY37109 | Canola | nucleus | 24.6 | 18.32 |
| CDY37130 | Canola | nucleus | 24.6 | 17.99 |
| CDY22826 | Canola | nucleus | 23.79 | 17.46 |
| CDY29620 | Canola | nucleus | 24.19 | 17.44 |
| CDY46564 | Canola | nucleus | 23.79 | 17.4 |
| CDY51249 | Canola | nucleus | 23.79 | 17.4 |
| CDY35575 | Canola | nucleus | 23.79 | 17.1 |
| CDY25209 | Canola | nucleus | 23.39 | 16.34 |
| CDY37108 | Canola | nucleus, plastid | 22.18 | 16.04 |
| CDY22801 | Canola | nucleus | 21.77 | 15.52 |
Protein Annotations
| EnsemblPlants:CDX75073 | EnsemblPlantsGene:GSBRNA2T00117107001 | Gene3D:2.40.330.10 | GO:A0A078CJ45 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | InterPro:IPR003340 | InterPro:IPR015300 |
| PANTHER:PTHR31140 | PANTHER:PTHR31140:SF2 | PFAM:PF02362 | PFscan:PS50863 | ProteinID:CDX75073 | ProteinID:CDX75073.1 |
| SEG:seg | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EDE70F | MapMan:15.5.5.3 | : |
Description
BnaA05g08190D
Coordinates
chrLK031802:+:2338759..2341479
Molecular Weight (calculated)
28680.2 Da
IEP (calculated)
7.261
GRAVY (calculated)
-0.868
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MSINQYSSDF NYHSLMWQQQ QHRHHHHQND VAEEKEALFE KPLTPSDVGK LNRLVIPKQH AERYFPLAAA AADAMEKGLL LCFEDEEGKP WRFRYSYWNS
101: SQSYVLTKGW SRYVKEKQLD AGDVILFHRH RVDGGRFFIG WRRRGNSSSS SDSYRHLQSN ASLQYYPHAG VQAVESQRGN SKTLRLFGVN MECQLDSDLS
201: DPSTPDGSTI CPTSHDQFHL YPQQHYPPPY YMDISVTGDV HQTRSPQG
101: SQSYVLTKGW SRYVKEKQLD AGDVILFHRH RVDGGRFFIG WRRRGNSSSS SDSYRHLQSN ASLQYYPHAG VQAVESQRGN SKTLRLFGVN MECQLDSDLS
201: DPSTPDGSTI CPTSHDQFHL YPQQHYPPPY YMDISVTGDV HQTRSPQG
001: MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL NRLVIPKQHA ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS
Arabidopsis Description
ARF31B3 domain-containing protein At2g36080 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.