Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014415.1-P | Field mustard | nucleus | 99.69 | 99.69 |
| CDY58763 | Canola | nucleus | 98.12 | 98.74 |
| CDY69432 | Canola | nucleus | 73.44 | 84.53 |
| CDX67872 | Canola | nucleus | 75.0 | 84.21 |
| CDX76605 | Canola | nucleus | 75.62 | 82.88 |
| CDY11388 | Canola | nucleus | 75.62 | 82.88 |
| AT3G61970.1 | Thale cress | nucleus | 75.0 | 80.27 |
| CDY48008 | Canola | nucleus | 58.12 | 61.18 |
| CDY27515 | Canola | nucleus | 57.81 | 60.86 |
| Zm00001d035982_P001 | Maize | nucleus | 16.56 | 60.23 |
| CDX83351 | Canola | nucleus | 57.81 | 60.06 |
| CDY50908 | Canola | nucleus | 58.75 | 59.68 |
| CDX80053 | Canola | nucleus | 55.0 | 59.26 |
| CDY41564 | Canola | nucleus | 54.69 | 58.92 |
| CDY67348 | Canola | nucleus | 22.5 | 48.0 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 32.81 | 42.0 |
| CDY43060 | Canola | cytosol | 21.25 | 41.72 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 25.62 | 41.41 |
| Zm00001d048815_P001 | Maize | nucleus | 30.0 | 41.38 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 25.0 | 41.03 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 24.69 | 40.31 |
| Os06t0107800-02 | Rice | nucleus | 25.0 | 40.2 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 24.38 | 39.8 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 30.94 | 39.76 |
| Zm00001d029749_P001 | Maize | nucleus | 33.75 | 39.56 |
| Os03t0120900-01 | Rice | nucleus | 38.44 | 39.55 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 24.69 | 39.5 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 39.38 | 39.5 |
| EER92015 | Sorghum | nucleus | 33.44 | 39.05 |
| Zm00001d010077_P001 | Maize | nucleus | 31.56 | 39.0 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 25.62 | 38.86 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 38.44 | 38.8 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 26.25 | 38.71 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 26.25 | 38.71 |
| CDX90001 | Canola | nucleus | 41.56 | 38.66 |
| Zm00001d047359_P001 | Maize | nucleus | 33.44 | 38.63 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 25.94 | 38.6 |
| CDY15208 | Canola | nucleus | 38.44 | 38.2 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 26.25 | 38.18 |
| Zm00001d027409_P001 | Maize | nucleus | 38.75 | 37.92 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 32.5 | 37.82 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 32.5 | 37.41 |
| OQU93364 | Sorghum | nucleus | 38.44 | 37.27 |
| CDY43751 | Canola | nucleus | 27.81 | 36.63 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 26.88 | 36.6 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 37.5 | 36.36 |
| Os10t0537100-00 | Rice | nucleus | 35.31 | 36.22 |
| Zm00001d024103_P001 | Maize | nucleus | 25.31 | 36.16 |
| Zm00001d035903_P001 | Maize | nucleus | 25.31 | 36.16 |
| KXG19112 | Sorghum | nucleus | 23.12 | 36.1 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 32.81 | 35.84 |
| Os04t0581400-01 | Rice | nucleus | 32.81 | 35.84 |
| CDX84162 | Canola | nucleus | 27.19 | 35.8 |
| CDX75073 | Canola | nucleus | 27.5 | 35.48 |
| CDY08512 | Canola | nucleus | 27.5 | 35.48 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 22.81 | 35.44 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 32.19 | 35.4 |
| CDX73868 | Canola | nucleus | 25.94 | 35.17 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 29.69 | 34.67 |
| CDY62470 | Canola | nucleus | 24.69 | 34.65 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 36.88 | 34.6 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 23.44 | 33.48 |
| CDY01036 | Canola | nucleus | 26.88 | 33.46 |
| KXG19111 | Sorghum | nucleus | 24.69 | 33.19 |
| EES13386 | Sorghum | nucleus | 25.94 | 32.81 |
| GSMUA_AchrUn_... | Banana | cytosol | 24.69 | 32.78 |
| Zm00001d024545_P001 | Maize | nucleus | 25.31 | 32.53 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 27.5 | 32.35 |
| KRG97268 | Soybean | nucleus | 41.56 | 32.2 |
| KRH68988 | Soybean | nucleus | 42.19 | 32.14 |
| CDY47260 | Canola | nucleus | 26.56 | 31.84 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 28.44 | 31.82 |
| Os02t0683500-01 | Rice | nucleus | 40.94 | 31.8 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 45.62 | 31.67 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 40.31 | 31.54 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 40.31 | 31.54 |
| Zm00001d002562_P001 | Maize | nucleus | 40.31 | 31.54 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 39.69 | 31.44 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 39.69 | 31.05 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 39.69 | 31.05 |
| Zm00001d026005_P001 | Maize | nucleus | 39.06 | 30.94 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 40.0 | 30.92 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 40.0 | 30.92 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 32.19 | 30.56 |
| EES12712 | Sorghum | nucleus | 40.0 | 30.48 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 28.75 | 30.26 |
| Os08t0157700-00 | Rice | nucleus | 26.88 | 29.97 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 26.88 | 29.86 |
| Zm00001d017618_P001 | Maize | nucleus | 38.12 | 28.91 |
| Zm00001d051471_P001 | Maize | nucleus | 37.81 | 28.81 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 40.94 | 28.73 |
| CDX97251 | Canola | nucleus | 30.0 | 28.32 |
| CDY07140 | Canola | nucleus | 26.88 | 28.1 |
| CDY49614 | Canola | nucleus | 27.19 | 28.06 |
| KRH47753 | Soybean | nucleus | 43.75 | 28.0 |
| EES07445 | Sorghum | nucleus | 37.5 | 27.65 |
| CDX80996 | Canola | nucleus | 23.75 | 27.64 |
| CDX81561 | Canola | nucleus | 28.12 | 26.24 |
| CDY45849 | Canola | nucleus, plastid | 28.44 | 26.0 |
| CDX97996 | Canola | nucleus | 25.62 | 25.23 |
| CDY58354 | Canola | nucleus | 25.62 | 25.15 |
| CDY72302 | Canola | nucleus | 25.62 | 25.15 |
| CDY24391 | Canola | nucleus | 26.56 | 25.15 |
| CDY61361 | Canola | nucleus | 25.62 | 25.08 |
| CDY36099 | Canola | nucleus | 26.88 | 24.57 |
| KRH06334 | Soybean | nucleus | 44.69 | 24.57 |
| CDY40973 | Canola | nucleus | 24.06 | 24.44 |
| CDX84999 | Canola | nucleus | 26.25 | 23.73 |
| CDY16133 | Canola | nucleus | 26.25 | 23.46 |
| CDX98911 | Canola | nucleus | 17.5 | 23.43 |
| CDY70080 | Canola | nucleus | 17.5 | 23.43 |
| CDX99755 | Canola | nucleus | 24.38 | 22.94 |
| CDX83547 | Canola | nucleus | 18.75 | 18.52 |
| CDY29599 | Canola | nucleus | 18.12 | 17.85 |
| CDY22814 | Canola | nucleus | 18.44 | 17.51 |
| CDY37109 | Canola | nucleus | 18.12 | 17.42 |
| CDY37130 | Canola | nucleus | 17.81 | 16.81 |
| CDY65812 | Canola | nucleus | 14.69 | 16.73 |
| CDY29620 | Canola | nucleus | 17.5 | 16.28 |
| CDY22826 | Canola | nucleus | 17.19 | 16.27 |
| CDY35575 | Canola | nucleus | 17.5 | 16.23 |
| CDY46564 | Canola | nucleus | 16.56 | 15.63 |
| CDY51249 | Canola | nucleus | 16.56 | 15.63 |
| CDY22801 | Canola | nucleus | 16.88 | 15.52 |
| CDY25209 | Canola | nucleus | 16.88 | 15.21 |
| CDY37108 | Canola | nucleus, plastid | 16.25 | 15.16 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | GO:A0A078J0P6 | UniProt:A0A078J0P6 | InterPro:B3_DNA-bd | EnsemblPlants:CDY58764 |
| ProteinID:CDY58764 | ProteinID:CDY58764.1 | ncoils:Coil | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00025125001 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 |
| PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EEC4EE | SEG:seg |
Description
BnaA04g27480DBnaA04g27480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J0P6]
Coordinates
chrLK033697:-:39556..40601
Molecular Weight (calculated)
36470.0 Da
IEP (calculated)
9.308
GRAVY (calculated)
-0.737
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKSNDLER SENIDSQNKK MNLEEERPVQ EASSMEREHM FDKVVTPSDV GKLNRLVIPK QHAERYFPLD NNSSDNNKGL LLNFEDRIGI LWSFRYSYWN
101: SSQSYVMTKG WSRFVKDKKL DAGDIVSFHR GSCNKDKLFI DWKRRPKIPD HQVVGAMFPR FYSYPYPQIQ ASYERHNLYH RYQRDIGIGY YVRSMERYDP
201: TAVIESVPVI MQRRAHVATM ASSRGEKRLR LFGVDMECVR GGRGGGGSVN STEEESSTSG GSISRGGVSM AGVGSPLQLR LVSSDGDDQS LVAMGAARVD
301: EDHHLFTKKG KSSLSFDLDK
101: SSQSYVMTKG WSRFVKDKKL DAGDIVSFHR GSCNKDKLFI DWKRRPKIPD HQVVGAMFPR FYSYPYPQIQ ASYERHNLYH RYQRDIGIGY YVRSMERYDP
201: TAVIESVPVI MQRRAHVATM ASSRGEKRLR LFGVDMECVR GGRGGGGSVN STEEESSTSG GSISRGGVSM AGVGSPLQLR LVSSDGDDQS LVAMGAARVD
301: EDHHLFTKKG KSSLSFDLDK
001: MNQEDKEKPI EEASSSMERE HMFDKVVTPS DVGKLNRLVI PKQHAERYFP LDNSTTNDSN KGLLLNFEDR SGNSWRFRYS YWNSSQSYVM TKGWSRFVKD
101: KKLDAGDIVS FQRDSCNKDK LYIDWRRRPK IPDHHHQQFA GAMFPRFYTF PHPQMPTNYE THNLYHRFHQ RDLGIGYYVR SMERSHPTAV IESVPVMMQR
201: RAQVASMASR GEKRLRLFGV DMECGGGGGS VNSTEEESSS SGGSIPRGRV SMVGAGSLLQ LRLVSSDDES LVAMEAASLE DHHFFTKKGK PSLSFDLDR
101: KKLDAGDIVS FQRDSCNKDK LYIDWRRRPK IPDHHHQQFA GAMFPRFYTF PHPQMPTNYE THNLYHRFHQ RDLGIGYYVR SMERSHPTAV IESVPVMMQR
201: RAQVASMASR GEKRLRLFGV DMECGGGGGS VNSTEEESSS SGGSIPRGRV SMVGAGSLLQ LRLVSSDDES LVAMEAASLE DHHFFTKKGK PSLSFDLDR
Arabidopsis Description
NGA2NGA2 [Source:UniProtKB/TrEMBL;Acc:A0A178V7R1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.