Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11388 | Canola | nucleus | 100.0 | 100.0 |
| Bra007646.1-P | Field mustard | nucleus | 98.97 | 98.97 |
| AT3G61970.1 | Thale cress | nucleus | 87.67 | 85.62 |
| CDX67872 | Canola | nucleus | 83.56 | 85.61 |
| CDY69432 | Canola | nucleus | 80.82 | 84.89 |
| CDY58764 | Canola | nucleus | 82.88 | 75.62 |
| CDY58763 | Canola | nucleus | 82.19 | 75.47 |
| CDY48008 | Canola | nucleus | 64.73 | 62.17 |
| CDY27515 | Canola | nucleus | 64.04 | 61.51 |
| CDX80053 | Canola | nucleus | 61.99 | 60.94 |
| CDY41564 | Canola | nucleus | 61.99 | 60.94 |
| CDX83351 | Canola | nucleus | 63.01 | 59.74 |
| CDY50908 | Canola | nucleus | 64.04 | 59.37 |
| Zm00001d035982_P001 | Maize | nucleus | 17.81 | 59.09 |
| CDY67348 | Canola | nucleus | 24.32 | 47.33 |
| CDY43060 | Canola | cytosol | 23.63 | 42.33 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 34.93 | 40.8 |
| Os06t0107800-02 | Rice | nucleus | 27.74 | 40.7 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 27.4 | 40.4 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 26.71 | 40.0 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 33.9 | 39.76 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 26.37 | 39.29 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 26.37 | 39.29 |
| Zm00001d048815_P001 | Maize | nucleus | 31.16 | 39.22 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 26.37 | 38.5 |
| Zm00001d029749_P001 | Maize | nucleus | 35.96 | 38.46 |
| Os03t0120900-01 | Rice | nucleus | 40.75 | 38.26 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 41.78 | 38.24 |
| EER92015 | Sorghum | nucleus | 35.62 | 37.96 |
| Zm00001d010077_P001 | Maize | nucleus | 33.56 | 37.84 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 28.08 | 37.79 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 28.08 | 37.79 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 27.74 | 37.67 |
| Zm00001d047359_P001 | Maize | nucleus | 35.62 | 37.55 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 40.75 | 37.54 |
| CDX90001 | Canola | nucleus | 44.18 | 37.5 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 28.08 | 37.27 |
| KXG19112 | Sorghum | nucleus | 26.03 | 37.07 |
| CDY15208 | Canola | nucleus | 40.75 | 36.96 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 34.93 | 36.69 |
| OQU93364 | Sorghum | nucleus | 41.44 | 36.67 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 26.37 | 36.49 |
| CDX73868 | Canola | nucleus | 29.45 | 36.44 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 34.25 | 36.36 |
| Zm00001d024103_P001 | Maize | nucleus | 27.74 | 36.16 |
| Zm00001d035903_P001 | Maize | nucleus | 27.74 | 36.16 |
| Zm00001d027409_P001 | Maize | nucleus | 40.41 | 36.09 |
| CDY08512 | Canola | nucleus | 30.48 | 35.89 |
| CDY43751 | Canola | nucleus | 29.79 | 35.8 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 40.07 | 35.45 |
| CDY62470 | Canola | nucleus | 27.4 | 35.09 |
| CDX84162 | Canola | nucleus | 29.11 | 34.98 |
| Os10t0537100-00 | Rice | nucleus | 37.33 | 34.94 |
| CDX75073 | Canola | nucleus | 29.45 | 34.68 |
| CDY01036 | Canola | nucleus | 30.48 | 34.63 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 34.59 | 34.47 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 27.74 | 34.47 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 40.07 | 34.31 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 33.9 | 34.02 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 31.51 | 33.58 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 23.63 | 33.5 |
| KXG19111 | Sorghum | nucleus | 27.05 | 33.19 |
| KRG97268 | Soybean | nucleus | 45.89 | 32.45 |
| Os04t0581400-01 | Rice | nucleus | 32.53 | 32.42 |
| CDY47260 | Canola | nucleus | 29.11 | 31.84 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 24.32 | 31.7 |
| GSMUA_AchrUn_... | Banana | cytosol | 26.03 | 31.54 |
| KRH68988 | Soybean | nucleus | 45.21 | 31.43 |
| Zm00001d024545_P001 | Maize | nucleus | 26.71 | 31.33 |
| VIT_15s0048g02370.t01 | Wine grape | nucleus | 48.97 | 31.02 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 28.77 | 30.88 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 35.62 | 30.86 |
| Os02t0683500-01 | Rice | nucleus | 42.47 | 30.1 |
| EES13386 | Sorghum | nucleus | 26.03 | 30.04 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 28.77 | 29.37 |
| Os08t0157700-00 | Rice | nucleus | 28.77 | 29.27 |
| Zm00001d026005_P001 | Maize | nucleus | 40.41 | 29.21 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 40.75 | 29.1 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 40.75 | 29.1 |
| Zm00001d002562_P001 | Maize | nucleus | 40.75 | 29.1 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 40.07 | 28.96 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 40.41 | 28.85 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 28.42 | 28.82 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 40.07 | 28.61 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 40.41 | 28.5 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 40.41 | 28.5 |
| CDY07140 | Canola | nucleus | 29.79 | 28.43 |
| EES12712 | Sorghum | nucleus | 40.75 | 28.33 |
| CDX97251 | Canola | nucleus | 32.88 | 28.32 |
| VIT_02s0025g03000.t01 | Wine grape | nucleus | 44.18 | 28.29 |
| CDY49614 | Canola | nucleus | 29.79 | 28.06 |
| CDX80996 | Canola | nucleus | 26.37 | 28.0 |
| Zm00001d017618_P001 | Maize | nucleus | 40.41 | 27.96 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 28.77 | 27.63 |
| Zm00001d051471_P001 | Maize | nucleus | 39.73 | 27.62 |
| KRH47753 | Soybean | nucleus | 46.92 | 27.4 |
| CDX81561 | Canola | nucleus | 31.51 | 26.82 |
| CDY45849 | Canola | nucleus, plastid | 31.85 | 26.57 |
| EES07445 | Sorghum | nucleus | 39.38 | 26.5 |
| CDX97996 | Canola | nucleus | 28.08 | 25.23 |
| CDY24391 | Canola | nucleus | 29.11 | 25.15 |
| CDY61361 | Canola | nucleus | 28.08 | 25.08 |
| CDY58354 | Canola | nucleus | 27.74 | 24.85 |
| CDY72302 | Canola | nucleus | 27.74 | 24.85 |
| CDY36099 | Canola | nucleus | 29.45 | 24.57 |
| CDY40973 | Canola | nucleus | 26.03 | 24.13 |
| CDY16133 | Canola | nucleus | 29.45 | 24.02 |
| CDX84999 | Canola | nucleus | 29.11 | 24.01 |
| KRH06334 | Soybean | nucleus | 47.26 | 23.71 |
| CDX99755 | Canola | nucleus | 26.37 | 22.65 |
| CDX98911 | Canola | nucleus | 18.49 | 22.59 |
| CDY70080 | Canola | nucleus | 18.49 | 22.59 |
| CDX83547 | Canola | nucleus | 20.55 | 18.52 |
| CDY37109 | Canola | nucleus | 20.55 | 18.02 |
| CDY29599 | Canola | nucleus | 19.86 | 17.85 |
| CDY22814 | Canola | nucleus | 19.86 | 17.21 |
| CDY65812 | Canola | nucleus | 16.1 | 16.73 |
| CDY22826 | Canola | nucleus | 19.18 | 16.57 |
| CDY37130 | Canola | nucleus | 19.18 | 16.52 |
| CDY29620 | Canola | nucleus | 19.18 | 16.28 |
| CDY35575 | Canola | nucleus | 19.18 | 16.23 |
| CDY46564 | Canola | nucleus | 18.84 | 16.22 |
| CDY51249 | Canola | nucleus | 18.84 | 16.22 |
| CDY25209 | Canola | nucleus | 18.84 | 15.49 |
| CDY22801 | Canola | nucleus | 18.15 | 15.23 |
| CDY37108 | Canola | nucleus, plastid | 17.12 | 14.58 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | GO:A0A078FH33 | UniProt:A0A078FH33 | InterPro:B3_DNA-bd | EnsemblPlants:CDX76605 |
| ProteinID:CDX76605 | ProteinID:CDX76605.1 | ProteinID:CDY11388.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00127059001 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 |
| PANTHER:PTHR31140 | PANTHER:PTHR31140:SF4 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EDCD92 | SEG:seg |
Description
BnaC08g31910DBnaA09g39540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FH33]
Coordinates
chrLK031808:+:154022..154900
Molecular Weight (calculated)
33002.8 Da
IEP (calculated)
7.752
GRAVY (calculated)
-0.674
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQENKKPLE EASTSMEREN MFDKVVTPSD VGKLNRLVIP KQHAERYFPL DNSSTNNKGL LLDFEDRTGS SWRFRYSYWN SSQSYVMTKG WSRFVKDKKL
101: DAGDIVSFQR DPCNKDKLYI DWRRRPKIPD HHQFAGAMFP RFYSFPHPQM PTSFESSHNL YHHRFQRDLG IGYYPTAVIE SVPVIMQRRE AQVANMVSSR
201: GEKRLRLFGV DMECGGGGGG SVNSTEEESS SSGGSMSRGG VSMAGVGSLL QLRLVSSDDE SLVAMEGASV DEDHHLFTTK KGKSSLSFDL DI
101: DAGDIVSFQR DPCNKDKLYI DWRRRPKIPD HHQFAGAMFP RFYSFPHPQM PTSFESSHNL YHHRFQRDLG IGYYPTAVIE SVPVIMQRRE AQVANMVSSR
201: GEKRLRLFGV DMECGGGGGG SVNSTEEESS SSGGSMSRGG VSMAGVGSLL QLRLVSSDDE SLVAMEGASV DEDHHLFTTK KGKSSLSFDL DI
001: MNQEDKEKPI EEASSSMERE HMFDKVVTPS DVGKLNRLVI PKQHAERYFP LDNSTTNDSN KGLLLNFEDR SGNSWRFRYS YWNSSQSYVM TKGWSRFVKD
101: KKLDAGDIVS FQRDSCNKDK LYIDWRRRPK IPDHHHQQFA GAMFPRFYTF PHPQMPTNYE THNLYHRFHQ RDLGIGYYVR SMERSHPTAV IESVPVMMQR
201: RAQVASMASR GEKRLRLFGV DMECGGGGGS VNSTEEESSS SGGSIPRGRV SMVGAGSLLQ LRLVSSDDES LVAMEAASLE DHHFFTKKGK PSLSFDLDR
101: KKLDAGDIVS FQRDSCNKDK LYIDWRRRPK IPDHHHQQFA GAMFPRFYTF PHPQMPTNYE THNLYHRFHQ RDLGIGYYVR SMERSHPTAV IESVPVMMQR
201: RAQVASMASR GEKRLRLFGV DMECGGGGGS VNSTEEESSS SGGSIPRGRV SMVGAGSLLQ LRLVSSDDES LVAMEAASLE DHHFFTKKGK PSLSFDLDR
Arabidopsis Description
NGA2NGA2 [Source:UniProtKB/TrEMBL;Acc:A0A178V7R1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.