Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037417.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY07140 | Canola | nucleus | 94.52 | 95.75 |
| CDY67348 | Canola | nucleus | 32.58 | 67.33 |
| CDX97251 | Canola | nucleus | 71.29 | 65.19 |
| AT4G01500.1 | Thale cress | nucleus | 65.16 | 60.66 |
| CDY43060 | Canola | cytosol | 30.0 | 57.06 |
| Zm00001d035982_P001 | Maize | nucleus | 14.52 | 51.14 |
| TraesCS7A01G461000.1 | Wheat | nucleus | 23.55 | 37.44 |
| TraesCS7D01G448900.1 | Wheat | nucleus | 23.55 | 37.24 |
| TraesCS7A01G020800.1 | Wheat | nucleus | 23.55 | 36.87 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 23.23 | 36.73 |
| Os06t0107800-02 | Rice | nucleus | 23.55 | 36.68 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 23.55 | 36.5 |
| TraesCS4A01G472700.1 | Wheat | nucleus | 24.19 | 34.56 |
| TraesCS7A01G020700.1 | Wheat | nucleus | 23.87 | 34.42 |
| TraesCS7D01G017000.1 | Wheat | nucleus | 23.55 | 33.64 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 23.87 | 33.64 |
| KXG19112 | Sorghum | nucleus | 21.94 | 33.17 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 25.16 | 31.33 |
| Zm00001d048815_P001 | Maize | nucleus | 23.23 | 31.03 |
| CDY69432 | Canola | nucleus | 27.74 | 30.94 |
| CDX67872 | Canola | nucleus | 28.39 | 30.88 |
| Zm00001d024545_P001 | Maize | nucleus | 24.52 | 30.52 |
| EES13386 | Sorghum | nucleus | 24.84 | 30.43 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 24.52 | 30.4 |
| Zm00001d035903_P001 | Maize | nucleus | 21.94 | 30.36 |
| CDY08512 | Canola | nucleus | 24.19 | 30.24 |
| Zm00001d024103_P001 | Maize | nucleus | 21.61 | 29.91 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 26.45 | 29.82 |
| CDX76605 | Canola | nucleus | 28.06 | 29.79 |
| CDY11388 | Canola | nucleus | 28.06 | 29.79 |
| Zm00001d010077_P001 | Maize | nucleus | 24.84 | 29.73 |
| TraesCS1A01G200500.1 | Wheat | nucleus | 26.45 | 29.5 |
| KXG19111 | Sorghum | nucleus | 22.58 | 29.41 |
| CDX84162 | Canola | nucleus | 22.9 | 29.22 |
| CDY43751 | Canola | nucleus | 22.9 | 29.22 |
| CDY01036 | Canola | nucleus | 24.19 | 29.18 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 19.35 | 29.13 |
| CDX75073 | Canola | nucleus | 23.23 | 29.03 |
| CDY62470 | Canola | nucleus | 21.29 | 28.95 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 19.68 | 28.91 |
| CDX73868 | Canola | nucleus | 21.94 | 28.81 |
| CDY15208 | Canola | nucleus | 29.68 | 28.57 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 20.65 | 28.57 |
| EER92015 | Sorghum | nucleus | 25.16 | 28.47 |
| CDX80053 | Canola | nucleus | 27.1 | 28.28 |
| CDY41564 | Canola | nucleus | 27.1 | 28.28 |
| Zm00001d029749_P001 | Maize | nucleus | 24.84 | 28.21 |
| TraesCS1D01G203900.1 | Wheat | nucleus | 26.45 | 28.18 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 26.45 | 27.99 |
| CDX90001 | Canola | nucleus | 30.97 | 27.91 |
| CDY27515 | Canola | nucleus | 27.1 | 27.63 |
| CDY48008 | Canola | nucleus | 27.1 | 27.63 |
| CDX83351 | Canola | nucleus | 27.42 | 27.6 |
| CDY58763 | Canola | nucleus | 28.06 | 27.36 |
| CDY47260 | Canola | nucleus | 23.55 | 27.34 |
| CDY50908 | Canola | nucleus | 27.74 | 27.3 |
| CDY58764 | Canola | nucleus | 28.06 | 27.19 |
| Zm00001d047359_P001 | Maize | nucleus | 24.19 | 27.08 |
| Os03t0120900-01 | Rice | nucleus | 27.1 | 27.01 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 27.42 | 26.65 |
| TraesCS5A01G516600.1 | Wheat | nucleus | 27.1 | 26.5 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 28.71 | 26.41 |
| OQU93364 | Sorghum | nucleus | 28.06 | 26.36 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 23.23 | 26.28 |
| Zm00001d027409_P001 | Maize | nucleus | 27.42 | 25.99 |
| Os08t0157700-00 | Rice | nucleus | 23.55 | 25.44 |
| Os04t0581400-01 | Rice | nucleus | 23.87 | 25.26 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 19.03 | 25.11 |
| Os10t0537100-00 | Rice | nucleus | 25.16 | 25.0 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 27.42 | 24.93 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 26.45 | 24.85 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.03 | 24.48 |
| CDX80996 | Canola | nucleus | 21.61 | 24.36 |
| CDX97996 | Canola | nucleus | 24.52 | 23.38 |
| CDY61361 | Canola | nucleus | 24.52 | 23.24 |
| CDY58354 | Canola | nucleus | 24.19 | 23.01 |
| CDY72302 | Canola | nucleus | 24.19 | 23.01 |
| CDX81561 | Canola | nucleus | 25.16 | 22.74 |
| CDY45849 | Canola | nucleus, plastid | 25.48 | 22.57 |
| CDY40973 | Canola | nucleus | 22.9 | 22.54 |
| CDX99755 | Canola | nucleus | 24.19 | 22.06 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 19.35 | 22.06 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 21.61 | 22.04 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 20.0 | 21.53 |
| CDY24391 | Canola | nucleus | 23.23 | 21.3 |
| Zm00001d026005_P001 | Maize | nucleus | 27.42 | 21.04 |
| Zm00001d002562_P001 | Maize | nucleus | 27.74 | 21.03 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 19.35 | 20.98 |
| TraesCS2A01G394700.1 | Wheat | nucleus | 27.1 | 20.79 |
| CDY36099 | Canola | nucleus | 23.23 | 20.57 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 27.1 | 20.54 |
| TraesCS2D01G392400.1 | Wheat | nucleus | 27.1 | 20.54 |
| CDX84999 | Canola | nucleus | 23.23 | 20.34 |
| EES12712 | Sorghum | nucleus | 27.42 | 20.24 |
| CDY16133 | Canola | nucleus | 23.23 | 20.11 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 26.13 | 19.8 |
| Os02t0683500-01 | Rice | nucleus | 26.13 | 19.66 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 25.81 | 19.56 |
| TraesCS6A01G259600.1 | Wheat | nucleus | 25.81 | 19.32 |
| TraesCS6D01G240600.1 | Wheat | nucleus | 25.81 | 19.32 |
| CDX98911 | Canola | nucleus | 14.84 | 19.25 |
| CDY70080 | Canola | nucleus | 14.84 | 19.25 |
| Zm00001d051471_P001 | Maize | nucleus | 25.81 | 19.05 |
| Zm00001d017618_P001 | Maize | nucleus | 25.48 | 18.72 |
| EES07445 | Sorghum | nucleus | 25.81 | 18.43 |
| CDX83547 | Canola | nucleus | 18.06 | 17.28 |
| CDY29599 | Canola | nucleus | 18.06 | 17.23 |
| CDY37109 | Canola | nucleus | 18.39 | 17.12 |
| CDY22814 | Canola | nucleus | 18.39 | 16.91 |
| CDY37130 | Canola | nucleus | 18.06 | 16.52 |
| CDY65812 | Canola | nucleus | 14.84 | 16.37 |
| CDY29620 | Canola | nucleus | 18.06 | 16.28 |
| CDY35575 | Canola | nucleus | 18.06 | 16.23 |
| CDY46564 | Canola | nucleus | 17.74 | 16.22 |
| CDY51249 | Canola | nucleus | 17.74 | 16.22 |
| CDY22826 | Canola | nucleus | 17.42 | 15.98 |
| CDY25209 | Canola | nucleus | 17.42 | 15.21 |
| CDY22801 | Canola | nucleus | 16.45 | 14.66 |
| CDY37108 | Canola | nucleus, plastid | 16.13 | 14.58 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | GO:A0A078IJP9 | UniProt:A0A078IJP9 | InterPro:B3_DNA-bd | EnsemblPlants:CDY49614 |
| ProteinID:CDY49614 | ProteinID:CDY49614.1 | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00093463001 | InterPro:IPR003340 | InterPro:IPR015300 | PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF4 | SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0002542080 | SEG:seg | : |
Description
BnaA09g03240DBnaA09g03240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IJP9]
Coordinates
chrLK032847:-:112285..113878
Molecular Weight (calculated)
35688.6 Da
IEP (calculated)
7.326
GRAVY (calculated)
-0.876
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGSGSNSN DFNMAMGEHM FDKVLTTSDV GKLNRLVIPK QHAENYFPLE EIENGTMLEF QDRNGKMWKF RYLYWSSSQS YVMTKGWVRF VKDKNLESGD
101: TISFHRSYVP DDTEPGKRIK KLYVDWRHRA DRNLVHNINH HHHYPLLMPP TYPTAGYYPL SGYSMPHYQR LPPFYHNQFQ ERDFSGYGYG GPYYARSPLD
201: HHHHYQYGRS EPLVYNSYPV YPTTGVPSSS ARLPPYPPPH QPPQEGTAKK LRLFGVDVEE SSSSGEARGE MAVAGYSSSS PVVIRDEESS SAMQLSEDEE
301: YKRKGKSIDF
101: TISFHRSYVP DDTEPGKRIK KLYVDWRHRA DRNLVHNINH HHHYPLLMPP TYPTAGYYPL SGYSMPHYQR LPPFYHNQFQ ERDFSGYGYG GPYYARSPLD
201: HHHHYQYGRS EPLVYNSYPV YPTTGVPSSS ARLPPYPPPH QPPQEGTAKK LRLFGVDVEE SSSSGEARGE MAVAGYSSSS PVVIRDEESS SAMQLSEDEE
301: YKRKGKSIDF
001: MNISTMNLDQ ELAEIRASSS DHTNYFYSSE RREHMFDKVL TPSDVGKLNR LVIPKQHAEN FFPLEDNQNG TVLDFQDKNG KMWRFRYSYW NSSQSYVMTK
101: GWSRFVKEKK LFAGDTVSFY RGYIPDDNAQ PERRRKIMFI DWRPRAEINF VHNINNHNFV FGSPTYPTAR FYPVTPEYSM PYRSFPPFYQ NQFQEREYLG
201: YGYGRVVNGN GVRYYAGSPL DQHHQWNLGR SEPLVYDSVP VFPAGRVPPS APPQPSTTKK LRLFGVDVEE SSSSGDTRGE MGVAGYSSSS PVVIRDDDQS
301: FWRSPRGEMA SSSSAMQLSD DEEYKRKGKS LEL
101: GWSRFVKEKK LFAGDTVSFY RGYIPDDNAQ PERRRKIMFI DWRPRAEINF VHNINNHNFV FGSPTYPTAR FYPVTPEYSM PYRSFPPFYQ NQFQEREYLG
201: YGYGRVVNGN GVRYYAGSPL DQHHQWNLGR SEPLVYDSVP VFPAGRVPPS APPQPSTTKK LRLFGVDVEE SSSSGDTRGE MGVAGYSSSS PVVIRDDDQS
301: FWRSPRGEMA SSSSAMQLSD DEEYKRKGKS LEL
Arabidopsis Description
NGA4NGA4 [Source:UniProtKB/TrEMBL;Acc:A0A178V2Z9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.