Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08512 | Canola | nucleus | 92.61 | 95.97 |
| CDX73868 | Canola | nucleus | 75.49 | 82.2 |
| CDY62470 | Canola | nucleus | 59.53 | 67.11 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 78.6 | 54.45 |
| CDY47260 | Canola | nucleus | 56.42 | 54.31 |
| CDY43751 | Canola | nucleus | 50.19 | 53.09 |
| CDX75073 | Canola | nucleus | 49.81 | 51.61 |
| CDX84162 | Canola | nucleus | 48.64 | 51.44 |
| CDY70080 | Canola | nucleus | 47.08 | 50.63 |
| CDX98911 | Canola | nucleus | 47.08 | 50.63 |
| CDX80996 | Canola | nucleus | 51.75 | 48.36 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 36.19 | 46.27 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 34.63 | 46.11 |
| TraesCS5B01G126200.1 | Wheat | nucleus | 44.36 | 43.02 |
| TraesCS5D01G134700.1 | Wheat | nucleus | 44.36 | 42.86 |
| TraesCS5A01G127100.1 | Wheat | nucleus | 43.58 | 42.11 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 40.08 | 41.7 |
| TraesCS2B01G482400.1 | Wheat | nucleus | 42.8 | 41.2 |
| TraesCS2A01G460700.1 | Wheat | nucleus | 42.41 | 40.98 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 38.52 | 40.91 |
| TraesCS4A01G198300.2 | Wheat | nucleus | 44.36 | 40.86 |
| KXG27771 | Sorghum | nucleus | 43.19 | 40.51 |
| TraesCS4B01G117100.1 | Wheat | nucleus | 43.58 | 40.14 |
| TraesCS2D01G460900.1 | Wheat | nucleus | 41.63 | 40.07 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 44.36 | 40.0 |
| CDY67348 | Canola | nucleus | 23.35 | 40.0 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 43.58 | 39.72 |
| GSMUA_Achr11P... | Banana | nucleus | 27.63 | 38.38 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 41.63 | 38.35 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 24.12 | 38.27 |
| KRH67965 | Soybean | nucleus | 42.8 | 38.19 |
| Zm00001d023446_P001 | Maize | nucleus | 42.02 | 38.16 |
| Os11t0156000-01 | Rice | nucleus | 41.25 | 37.99 |
| KRG96220 | Soybean | nucleus | 42.8 | 36.79 |
| Solyc09g010230.1.1 | Tomato | nucleus | 49.03 | 36.52 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 38.91 | 36.5 |
| Zm00001d052591_P001 | Maize | nucleus | 42.8 | 35.83 |
| KRH32791 | Soybean | nucleus | 46.69 | 35.61 |
| KRH72242 | Soybean | nucleus | 47.47 | 35.47 |
| KXG22988 | Sorghum | plastid | 43.97 | 35.31 |
| PGSC0003DMT400023077 | Potato | nucleus | 45.91 | 35.22 |
| CDY43060 | Canola | cytosol | 22.18 | 34.97 |
| CDY69432 | Canola | nucleus | 33.46 | 30.94 |
| CDY48008 | Canola | nucleus | 36.58 | 30.92 |
| CDY27515 | Canola | nucleus | 36.19 | 30.59 |
| CDY11388 | Canola | nucleus | 34.63 | 30.48 |
| CDX76605 | Canola | nucleus | 34.63 | 30.48 |
| CDX80053 | Canola | nucleus | 35.02 | 30.3 |
| CDY41564 | Canola | nucleus | 35.02 | 30.3 |
| CDX67872 | Canola | nucleus | 33.46 | 30.18 |
| CDY50908 | Canola | nucleus | 35.8 | 29.21 |
| Os12t0157000-01 | Rice | cytosol, nucleus | 23.74 | 29.05 |
| CDX83351 | Canola | nucleus | 34.63 | 28.9 |
| CDY58763 | Canola | nucleus | 33.46 | 27.04 |
| CDY58764 | Canola | nucleus | 33.46 | 26.88 |
| CDX97996 | Canola | nucleus | 32.68 | 25.85 |
| CDY58354 | Canola | nucleus | 32.68 | 25.77 |
| CDY72302 | Canola | nucleus | 32.68 | 25.77 |
| CDY61361 | Canola | nucleus | 32.68 | 25.69 |
| CDY24391 | Canola | nucleus | 32.68 | 24.85 |
| CDY15208 | Canola | nucleus | 31.13 | 24.84 |
| CDX81561 | Canola | nucleus | 33.07 | 24.78 |
| CDX90001 | Canola | nucleus | 33.07 | 24.71 |
| CDY45849 | Canola | nucleus, plastid | 33.46 | 24.57 |
| CDY07140 | Canola | nucleus | 29.18 | 24.51 |
| CDY49614 | Canola | nucleus | 29.18 | 24.19 |
| CDX97251 | Canola | nucleus | 31.91 | 24.19 |
| CDY40973 | Canola | nucleus | 29.57 | 24.13 |
| CDY36099 | Canola | nucleus | 32.68 | 24.0 |
| CDX84999 | Canola | nucleus | 32.3 | 23.45 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 30.35 | 22.94 |
| CDY16133 | Canola | nucleus | 31.91 | 22.91 |
| CDX99755 | Canola | nucleus | 29.57 | 22.35 |
| CDX83547 | Canola | nucleus | 22.96 | 18.21 |
| CDY29599 | Canola | nucleus | 22.96 | 18.15 |
| CDY65812 | Canola | nucleus | 19.46 | 17.79 |
| CDY37109 | Canola | nucleus | 22.96 | 17.72 |
| CDY22814 | Canola | nucleus | 22.96 | 17.51 |
| CDY37130 | Canola | nucleus | 22.96 | 17.4 |
| CDY29620 | Canola | nucleus | 22.96 | 17.15 |
| CDY46564 | Canola | nucleus | 22.57 | 17.11 |
| CDY51249 | Canola | nucleus | 22.57 | 17.11 |
| CDY22826 | Canola | nucleus | 22.18 | 16.86 |
| CDY35575 | Canola | nucleus | 22.57 | 16.81 |
| CDY22801 | Canola | nucleus | 21.4 | 15.8 |
| CDY25209 | Canola | nucleus | 21.79 | 15.77 |
| CDY37108 | Canola | nucleus, plastid | 20.62 | 15.45 |
Protein Annotations
| EnsemblPlants:CDY01036 | EnsemblPlantsGene:GSBRNA2T00111064001 | Gene3D:2.40.330.10 | GO:A0A078EIW6 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | InterPro:IPR003340 | InterPro:IPR015300 |
| PANTHER:PTHR31140 | PANTHER:PTHR31140:SF2 | PFAM:PF02362 | PFscan:PS50863 | ProteinID:CDY01036 | ProteinID:CDY01036.1 |
| SMART:SM01019 | SUPFAM:SSF101936 | UniParc:UPI0004EE7CD3 | MapMan:15.5.5.3 | : | : |
Description
BnaC05g41640D
Coordinates
chrLK031923:-:818260..820513
Molecular Weight (calculated)
29085.6 Da
IEP (calculated)
7.495
GRAVY (calculated)
-0.675
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVNHYSNTL SSHNHHIDHK ESLFEKSLTP SDVGKLNRLV IPKQHAERYL PLNNCGGGDD VTESTEKGVL LSFEDESGKS WKFRYSYWNS SQSYVLTKGW
101: SRYVKDKHLN AGDVVLFQRH RFDIHRLFIG WRRRGETSSF SAVSAVSQDP RANTTAFWNV LTTPYRQVHA STSSYPNNIH QEYSHYGPVA ETPTVVAGSS
201: RTVRLFGVNL ECHSDVVEPP PCPDAYNGQH IYYYSTPHPM NISYAGEAME QVGDGRG
101: SRYVKDKHLN AGDVVLFQRH RFDIHRLFIG WRRRGETSSF SAVSAVSQDP RANTTAFWNV LTTPYRQVHA STSSYPNNIH QEYSHYGPVA ETPTVVAGSS
201: RTVRLFGVNL ECHSDVVEPP PCPDAYNGQH IYYYSTPHPM NISYAGEAME QVGDGRG
001: MSVNHYHNTL SLHHHHQNDV AIAQRESLFE KSLTPSDVGK LNRLVIPKQH AEKYFPLNNN NNNGGSGDDV ATTEKGMLLS FEDESGKCWK FRYSYWNSSQ
101: SYVLTKGWSR YVKDKHLDAG DVVFFQRHRF DLHRLFIGWR RRGEASSSPA VSVVSQEALV NTTAYWSGLT TPYRQVHAST TYPNIHQEYS HYGAVVDHAQ
201: SIPPVVAGSS RTVRLFGVNL ECHGDAVEPP PRPDVYNDQH IYYYSTPHPM NISFAGEALE QVGDGRG
101: SYVLTKGWSR YVKDKHLDAG DVVFFQRHRF DLHRLFIGWR RRGEASSSPA VSVVSQEALV NTTAYWSGLT TPYRQVHAST TYPNIHQEYS HYGAVVDHAQ
201: SIPPVVAGSS RTVRLFGVNL ECHGDAVEPP PRPDVYNDQH IYYYSTPHPM NISFAGEALE QVGDGRG
Arabidopsis Description
AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LT60]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.