Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0156000-01 | Rice | nucleus | 65.24 | 49.1 |
| Zm00001d023446_P001 | Maize | nucleus | 61.43 | 45.58 |
| KXG22988 | Sorghum | plastid | 64.29 | 42.19 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 28.57 | 29.85 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 34.76 | 29.55 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 31.9 | 27.69 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 20.48 | 26.54 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 24.29 | 26.42 |
| GSMUA_Achr11P... | Banana | nucleus | 22.86 | 25.95 |
| CDY08512 | Canola | nucleus | 28.1 | 23.79 |
| CDY01036 | Canola | nucleus | 29.05 | 23.74 |
| Bra017262.1-P | Field mustard | nucleus | 27.14 | 23.27 |
| CDX73868 | Canola | nucleus | 25.71 | 22.88 |
| Bra001411.1-P | Field mustard | nucleus | 25.71 | 22.88 |
| Bra034828.1-P | Field mustard | nucleus | 28.1 | 22.87 |
| CDX84162 | Canola | nucleus | 26.19 | 22.63 |
| CDY43751 | Canola | nucleus | 26.19 | 22.63 |
| CDX75073 | Canola | nucleus | 26.67 | 22.58 |
| Bra005301.1-P | Field mustard | nucleus | 26.67 | 22.58 |
| AT2G36080.1 | Thale cress | nucleus | 26.19 | 22.54 |
| Bra041023.1-P | Field mustard | nucleus | 28.1 | 22.35 |
| KRH32791 | Soybean | nucleus | 34.29 | 21.36 |
| CDY62470 | Canola | nucleus | 22.86 | 21.05 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 28.57 | 21.05 |
| KRH72242 | Soybean | nucleus | 33.33 | 20.35 |
| AT5G06250.4 | Thale cress | nucleus | 26.19 | 19.37 |
| CDY47260 | Canola | nucleus | 24.29 | 19.1 |
| Bra005886.1-P | Field mustard | nucleus | 24.29 | 19.1 |
| KRH67965 | Soybean | nucleus | 26.19 | 19.1 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 29.52 | 18.24 |
| KRG96220 | Soybean | nucleus | 25.71 | 18.06 |
| PGSC0003DMT400072354 | Potato | nucleus | 24.29 | 17.71 |
| Os06t0107800-02 | Rice | nucleus | 16.19 | 17.09 |
| Solyc10g083210.1.1 | Tomato | nucleus | 24.76 | 16.88 |
| Solyc09g010230.1.1 | Tomato | nucleus | 27.62 | 16.81 |
| Os03t0120900-01 | Rice | nucleus | 24.76 | 16.72 |
| PGSC0003DMT400023077 | Potato | nucleus | 26.67 | 16.72 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 29.52 | 16.71 |
| Os10t0537100-00 | Rice | nucleus | 23.81 | 16.03 |
| Os02t0455800-01 | Rice | nucleus | 19.05 | 14.98 |
| CDX80996 | Canola | nucleus | 19.52 | 14.91 |
| CDX98911 | Canola | nucleus | 16.67 | 14.64 |
| CDY70080 | Canola | nucleus | 16.67 | 14.64 |
| Bra009171.1-P | Field mustard | nucleus | 16.67 | 14.64 |
| Os02t0455900-00 | Rice | nucleus | 16.67 | 12.87 |
| Os02t0683500-01 | Rice | nucleus | 23.81 | 12.14 |
| Os04t0581400-01 | Rice | nucleus | 16.19 | 11.6 |
| Os08t0157700-00 | Rice | nucleus | 15.71 | 11.5 |
| Os05t0549800-01 | Rice | nucleus | 18.1 | 11.08 |
| Os02t0764100-01 | Rice | mitochondrion | 13.33 | 11.07 |
| Os01t0693400-01 | Rice | nucleus | 16.67 | 8.91 |
| Os01t0141000-01 | Rice | nucleus, plastid | 13.81 | 7.95 |
| Os01t0140700-00 | Rice | nucleus | 11.9 | 7.89 |
Protein Annotations
| EnsemblPlants:Os12t0157000-01 | EnsemblPlantsGene:Os12g0157000 | Gene3D:2.40.330.10 | InterPro:DNA-bd_pseudobarrel_sf | InterPro:IPR015300 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF19 | ProteinID:BAH95528.1 | ProteinID:BAT15961.1 | SEG:seg | UniParc:UPI0001B66AED | UniProt:C7JAA9 |
| MapMan:35.1 | : | : | : | : | : |
Description
DNA-binding pseudobarrel domain domain containing protein. (Os12t0157000-01)
Coordinates
chr12:-:2835307..2837128
Molecular Weight (calculated)
22972.6 Da
IEP (calculated)
7.776
GRAVY (calculated)
-0.656
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: TTHHHHLHLL PPLLSSPLLH YPTFAPNTSL FRSTDRSALA QPHRYVKEKR LDAGDVVHFE RVRGLGAADR LFIGCRRRGE SAPAPPPAVR VTPQPPALNG
101: GEQQPWSPMC YSTSGSSYDP TSPANSYAYH RSVDQDHSDI LHAGESQREA DAKSSSAASA PPPSRRLRLF GVNLDCGPEP EADQATAMYG YMHHQSPYAA
201: VSTVPNYWGS
101: GEQQPWSPMC YSTSGSSYDP TSPANSYAYH RSVDQDHSDI LHAGESQREA DAKSSSAASA PPPSRRLRLF GVNLDCGPEP EADQATAMYG YMHHQSPYAA
201: VSTVPNYWGS
001: MSVNHYSTDH HHTLLWQQQQ HRHTTDTSET TTTATWLHDD LKESLFEKSL TPSDVGKLNR LVIPKQHAEK YFPLNAVLVS SAAADTSSSE KGMLLSFEDE
101: SGKSWRFRYS YWNSSQSYVL TKGWSRFVKD KQLDPGDVVF FQRHRSDSRR LFIGWRRRGQ GSSSSVAATN SAVNTSSMGA LSYHQIHATS NYSNPPSHSE
201: YSHYGAAVAT AAETHSTPSS SVVGSSRTVR LFGVNLECQM DENDGDDSVA VATTVESPDG YYGQNMYYYY SHPHNMVILT LL
101: SGKSWRFRYS YWNSSQSYVL TKGWSRFVKD KQLDPGDVVF FQRHRSDSRR LFIGWRRRGQ GSSSSVAATN SAVNTSSMGA LSYHQIHATS NYSNPPSHSE
201: YSHYGAAVAT AAETHSTPSS SVVGSSRTVR LFGVNLECQM DENDGDDSVA VATTVESPDG YYGQNMYYYY SHPHNMVILT LL
Arabidopsis Description
AP2/B3-like transcriptional factor family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BF34]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.