Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | nucleus | 45.68 | 40.0 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 49.38 | 33.06 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 40.74 | 32.84 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 37.04 | 31.09 |
| GSMUA_Achr7P04630_001 | Banana | nucleus | 37.65 | 29.61 |
| TraesCS2B01G482400.1 | Wheat | nucleus | 48.77 | 29.59 |
| TraesCS5B01G126200.1 | Wheat | nucleus | 48.15 | 29.43 |
| TraesCS2A01G460700.1 | Wheat | nucleus | 48.15 | 29.32 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 44.44 | 29.15 |
| TraesCS5D01G134700.1 | Wheat | nucleus | 47.53 | 28.95 |
| TraesCS5A01G127100.1 | Wheat | nucleus | 47.53 | 28.95 |
| Os11t0156000-01 | Rice | nucleus | 49.38 | 28.67 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 48.15 | 28.47 |
| TraesCS2D01G460900.1 | Wheat | nucleus | 46.91 | 28.46 |
| GSMUA_Achr5P12850_001 | Banana | nucleus | 37.04 | 28.44 |
| KXG27771 | Sorghum | nucleus | 47.53 | 28.1 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 48.15 | 27.96 |
| TraesCS4A01G198300.2 | Wheat | nucleus | 48.15 | 27.96 |
| TraesCS4B01G117100.1 | Wheat | nucleus | 48.15 | 27.96 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 48.15 | 27.66 |
| Zm00001d023446_P001 | Maize | nucleus | 47.53 | 27.21 |
| CDY62470 | Canola | nucleus | 37.04 | 26.32 |
| GSMUA_Achr4P12210_001 | Banana | nucleus | 35.8 | 25.89 |
| CDY43751 | Canola | nucleus | 38.27 | 25.51 |
| Bra001411.1-P | Field mustard | nucleus | 37.04 | 25.42 |
| CDX73868 | Canola | nucleus | 37.04 | 25.42 |
| Bra017262.1-P | Field mustard | nucleus | 38.27 | 25.31 |
| CDX84162 | Canola | nucleus | 37.65 | 25.1 |
| KXG22988 | Sorghum | plastid | 49.38 | 25.0 |
| Zm00001d052591_P001 | Maize | nucleus | 46.91 | 24.76 |
| GSMUA_Achr4P24970_001 | Banana | nucleus | 35.8 | 24.68 |
| Bra005301.1-P | Field mustard | nucleus | 37.65 | 24.6 |
| CDX75073 | Canola | nucleus | 37.65 | 24.6 |
| CDY08512 | Canola | nucleus | 37.65 | 24.6 |
| AT2G36080.1 | Thale cress | nucleus | 37.04 | 24.59 |
| Bra041023.1-P | Field mustard | nucleus | 39.51 | 24.24 |
| CDY01036 | Canola | nucleus | 38.27 | 24.12 |
| GSMUA_AchrUn_... | Banana | cytosol | 35.8 | 24.07 |
| Bra034828.1-P | Field mustard | nucleus | 37.65 | 23.64 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 40.74 | 23.16 |
| GSMUA_Achr4P30170_001 | Banana | nucleus | 35.19 | 22.89 |
| GSMUA_Achr5P10220_001 | Banana | nucleus | 38.27 | 22.79 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 47.53 | 22.65 |
| GSMUA_Achr4P26430_001 | Banana | nucleus | 34.57 | 22.4 |
| KRH67965 | Soybean | nucleus | 39.51 | 22.22 |
| AT5G06250.4 | Thale cress | nucleus | 38.89 | 22.18 |
| Bra005886.1-P | Field mustard | nucleus | 36.42 | 22.1 |
| CDY47260 | Canola | nucleus | 36.42 | 22.1 |
| KRG96220 | Soybean | nucleus | 40.12 | 21.74 |
| PGSC0003DMT400072354 | Potato | nucleus | 38.27 | 21.53 |
| GSMUA_Achr2P00400_001 | Banana | nucleus | 37.65 | 21.18 |
| Solyc09g010230.1.1 | Tomato | nucleus | 45.06 | 21.16 |
| Solyc10g083210.1.1 | Tomato | nucleus | 40.12 | 21.1 |
| CDX80996 | Canola | nucleus | 35.8 | 21.09 |
| KRH32791 | Soybean | nucleus | 43.21 | 20.77 |
| GSMUA_Achr2P10230_001 | Banana | nucleus | 38.89 | 20.72 |
| KRH72242 | Soybean | nucleus | 43.83 | 20.64 |
| GSMUA_Achr9P18780_001 | Banana | nucleus | 36.42 | 20.63 |
| Os12t0157000-01 | Rice | cytosol, nucleus | 26.54 | 20.48 |
| GSMUA_Achr1P03600_001 | Banana | nucleus | 41.36 | 20.3 |
| GSMUA_Achr6P09880_001 | Banana | nucleus | 35.8 | 20.07 |
| PGSC0003DMT400023077 | Potato | nucleus | 41.36 | 20.0 |
| GSMUA_Achr1P21250_001 | Banana | nucleus | 35.19 | 19.39 |
| GSMUA_Achr2P22560_001 | Banana | nucleus | 37.04 | 19.35 |
| GSMUA_Achr6P01420_001 | Banana | nucleus | 37.65 | 19.3 |
| GSMUA_Achr1P05400_001 | Banana | nucleus | 35.19 | 19.13 |
| GSMUA_Achr3P29380_001 | Banana | nucleus | 30.86 | 19.01 |
| GSMUA_Achr5P09950_001 | Banana | nucleus | 37.65 | 18.94 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 40.74 | 17.79 |
| GSMUA_Achr5P20340_001 | Banana | nucleus | 33.95 | 16.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.42 | 15.78 |
| GSMUA_Achr4P06710_001 | Banana | nucleus | 31.48 | 14.57 |
| CDY70080 | Canola | nucleus | 20.99 | 14.23 |
| CDX98911 | Canola | nucleus | 20.99 | 14.23 |
| Bra009171.1-P | Field mustard | nucleus | 20.99 | 14.23 |
| GSMUA_Achr9P21470_001 | Banana | nucleus | 24.69 | 12.9 |
| GSMUA_Achr3P21100_001 | Banana | nucleus | 32.72 | 12.86 |
| GSMUA_Achr11P... | Banana | nucleus | 26.54 | 12.8 |
| GSMUA_Achr10P... | Banana | nucleus | 22.84 | 12.67 |
| GSMUA_Achr8P14650_001 | Banana | nucleus | 30.86 | 12.08 |
| GSMUA_Achr4P03670_001 | Banana | nucleus | 20.99 | 11.56 |
Protein Annotations
| Gene3D:2.40.330.10 | MapMan:35.1 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G08980_001 | EnsemblPlants:GSMUA_Achr9P08980_001 | EnsemblPlants:GSMUA_Achr9T08980_001 | InterPro:IPR003340 | InterPro:IPR015300 |
| UniProt:M0TYQ7 | PFAM:PF02362 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF2 | SMART:SM01019 | SUPFAM:SSF101936 |
| UniParc:UPI0002969155 | : | : | : | : | : |
Description
Putative hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G08980_001]
Coordinates
chr9:+:5808482..5809075
Molecular Weight (calculated)
18316.7 Da
IEP (calculated)
9.080
GRAVY (calculated)
-0.685
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMNPITQHH PQFCSWAPPL GNPHLYRHHT YRVSQEGDQY EREHMFEKSL TPSDVGKLNR LVIPKHYAEN QSYVLTKGWS RFVKEKGLDA GDLVSFGRLR
101: GGVDRLCISC RRRGENERPP AACTATTGDA AVPWSPTCYT ARAHAPTSHT GRICCIRSYN SM
101: GGVDRLCISC RRRGENERPP AACTATTGDA AVPWSPTCYT ARAHAPTSHT GRICCIRSYN SM
001: MNQEDKEKPI EEASSSMERE HMFDKVVTPS DVGKLNRLVI PKQHAERYFP LDNSTTNDSN KGLLLNFEDR SGNSWRFRYS YWNSSQSYVM TKGWSRFVKD
101: KKLDAGDIVS FQRDSCNKDK LYIDWRRRPK IPDHHHQQFA GAMFPRFYTF PHPQMPTNYE THNLYHRFHQ RDLGIGYYVR SMERSHPTAV IESVPVMMQR
201: RAQVASMASR GEKRLRLFGV DMECGGGGGS VNSTEEESSS SGGSIPRGRV SMVGAGSLLQ LRLVSSDDES LVAMEAASLE DHHFFTKKGK PSLSFDLDR
101: KKLDAGDIVS FQRDSCNKDK LYIDWRRRPK IPDHHHQQFA GAMFPRFYTF PHPQMPTNYE THNLYHRFHQ RDLGIGYYVR SMERSHPTAV IESVPVMMQR
201: RAQVASMASR GEKRLRLFGV DMECGGGGGS VNSTEEESSS SGGSIPRGRV SMVGAGSLLQ LRLVSSDDES LVAMEAASLE DHHFFTKKGK PSLSFDLDR
Arabidopsis Description
NGA2NGA2 [Source:UniProtKB/TrEMBL;Acc:A0A178V7R1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.