Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G198300.2 | Wheat | nucleus | 97.49 | 97.49 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 95.7 | 94.68 |
| TraesCS5B01G126200.1 | Wheat | nucleus | 76.7 | 80.75 |
| TraesCS2B01G482400.1 | Wheat | nucleus | 75.63 | 79.03 |
| HORVU4Hr1G021650.22 | Barley | nucleus | 76.7 | 76.7 |
| KXG27771 | Sorghum | nucleus | 75.27 | 76.64 |
| Os11t0156000-01 | Rice | nucleus | 74.19 | 74.19 |
| Zm00001d052591_P001 | Maize | nucleus | 70.97 | 64.5 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 41.94 | 58.21 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 39.43 | 56.99 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 47.31 | 54.55 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 46.95 | 53.04 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 27.96 | 48.15 |
| AT2G36080.1 | Thale cress | nucleus | 40.86 | 46.72 |
| Bra017262.1-P | Field mustard | nucleus | 40.14 | 45.71 |
| CDY43751 | Canola | nucleus | 39.78 | 45.68 |
| CDY62470 | Canola | nucleus | 36.92 | 45.18 |
| Bra001411.1-P | Field mustard | nucleus | 37.99 | 44.92 |
| CDX73868 | Canola | nucleus | 37.99 | 44.92 |
| CDX84162 | Canola | nucleus | 39.07 | 44.86 |
| Bra005301.1-P | Field mustard | nucleus | 39.43 | 44.35 |
| CDX75073 | Canola | nucleus | 39.43 | 44.35 |
| CDY01036 | Canola | nucleus | 40.14 | 43.58 |
| CDY08512 | Canola | nucleus | 38.71 | 43.55 |
| Bra041023.1-P | Field mustard | nucleus | 40.86 | 43.18 |
| Bra034828.1-P | Field mustard | nucleus | 39.78 | 43.02 |
| GSMUA_Achr11P... | Banana | nucleus | 27.96 | 42.16 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 40.5 | 39.65 |
| TraesCS7B01G362500.1 | Wheat | nucleus | 27.6 | 39.29 |
| Bra005886.1-P | Field mustard | nucleus | 36.92 | 38.58 |
| CDY47260 | Canola | nucleus | 36.92 | 38.58 |
| KRH67965 | Soybean | nucleus | 39.43 | 38.19 |
| AT5G06250.4 | Thale cress | nucleus | 38.35 | 37.68 |
| KRG96220 | Soybean | nucleus | 40.14 | 37.46 |
| KRH32791 | Soybean | nucleus | 45.16 | 37.39 |
| PGSC0003DMT400072354 | Potato | nucleus | 38.35 | 37.15 |
| CDX80996 | Canola | nucleus | 34.77 | 35.27 |
| KRH72242 | Soybean | nucleus | 43.37 | 35.17 |
| Solyc10g083210.1.1 | Tomato | nucleus | 38.71 | 35.06 |
| TraesCS3B01G065000.1 | Wheat | mitochondrion, nucleus | 27.24 | 34.86 |
| TraesCS1B01G215000.1 | Wheat | nucleus | 34.05 | 34.55 |
| Solyc09g010230.1.1 | Tomato | nucleus | 39.78 | 32.17 |
| TraesCS4B01G348500.1 | Wheat | nucleus | 36.2 | 31.66 |
| PGSC0003DMT400023077 | Potato | nucleus | 37.99 | 31.64 |
| CDY70080 | Canola | nucleus | 26.16 | 30.54 |
| CDX98911 | Canola | nucleus | 26.16 | 30.54 |
| Bra009171.1-P | Field mustard | nucleus | 26.16 | 30.54 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 39.78 | 29.92 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 32.97 | 27.06 |
| TraesCS4B01G325600.1 | Wheat | nucleus | 29.03 | 26.3 |
| TraesCS2B01G412700.1 | Wheat | nucleus | 36.92 | 25.18 |
| TraesCS6B01G286900.1 | Wheat | nucleus | 36.2 | 24.69 |
| TraesCS1B01G392300.1 | Wheat | nucleus | 34.05 | 24.3 |
| TraesCS3B01G293000.1 | Wheat | nucleus | 32.97 | 24.02 |
| TraesCS4B01G325700.1 | Wheat | plastid | 28.67 | 23.81 |
| TraesCS3B01G064900.1 | Wheat | nucleus | 29.75 | 23.31 |
| TraesCS1B01G392000.1 | Wheat | nucleus | 33.69 | 22.87 |
| TraesCS3B01G065100.1 | Wheat | nucleus | 28.67 | 22.86 |
| TraesCS1B01G392200.1 | Wheat | nucleus, plastid | 33.33 | 22.36 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G117100.1 | EnsemblPlantsGene:TraesCS4B01G117100 | Gene3D:2.40.330.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | InterPro:IPR003340 | InterPro:IPR015300 | PANTHER:PTHR31140 |
| PANTHER:PTHR31140:SF19 | PFAM:PF02362 | PFscan:PS50863 | SEG:seg | SMART:SM01019 | SUPFAM:SSF101936 |
| TIGR:cd10017 | MapMan:15.5.5.3 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:135211405..135212431
Molecular Weight (calculated)
31275.4 Da
IEP (calculated)
7.963
GRAVY (calculated)
-0.705
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMNPLSQEH PNAWPWGVAM YTNLHYQQYH YEKEHLFEKA LTPSDVGKLN RLVIPKQHAE RCFPLGGDSG EKGLLLSFDD EAGKPWRFRY SYWTSSQSYV
101: LTKGWSRYVK EKHLEAGDVV HFERVRGLGT GDRLFIGCRR RGDVSAPTAV APPPAVRVVP ASGQSPREQL QYQQPWSPMC YSTSSSYPTS PATSHAYRRS
201: AEHDHRDMHH AGESQWDADT RSCSPASAPT RRLRLFGVNL DCGPEPEAEA VPATPAMYGY VHQSPYAAVS PVPNNWGSS
101: LTKGWSRYVK EKHLEAGDVV HFERVRGLGT GDRLFIGCRR RGDVSAPTAV APPPAVRVVP ASGQSPREQL QYQQPWSPMC YSTSSSYPTS PATSHAYRRS
201: AEHDHRDMHH AGESQWDADT RSCSPASAPT RRLRLFGVNL DCGPEPEAEA VPATPAMYGY VHQSPYAAVS PVPNNWGSS
001: MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL NRLVIPKQHA ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGT LFI
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGT LFI
Arabidopsis Description
ARF31B3 domain-containing protein At2g36080 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.