Factsheet for TraesCS4B01G325600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G322500.1	Wheat	nucleus	94.48	95.41
HORVU4Hr1G082090.2	Barley	mitochondrion	91.56	81.98
TraesCSU01G179500.1	Wheat	nucleus	85.06	81.88
TraesCS3A01G053900.1	Wheat	nucleus	84.74	81.56
TraesCS3B01G065000.1	Wheat	mitochondrion, nucleus	40.26	56.88
TraesCS3B01G064900.1	Wheat	nucleus	64.29	55.62
TraesCS3B01G065100.1	Wheat	nucleus	62.34	54.86
TraesCS4B01G325700.1	Wheat	plastid	59.09	54.17
OQU77426	Sorghum	nucleus	25.0	47.83
TraesCS3B01G293000.1	Wheat	nucleus	56.49	45.43
TraesCS1B01G392300.1	Wheat	nucleus	53.25	41.94
TraesCS1B01G392000.1	Wheat	nucleus	53.9	40.39
TraesCS7B01G362500.1	Wheat	nucleus	25.32	39.8
TraesCS1B01G392200.1	Wheat	nucleus, plastid	52.6	38.94
TraesCS5B01G126200.1	Wheat	nucleus	26.95	31.32
TraesCS2B01G482400.1	Wheat	nucleus	26.62	30.71
TraesCS1B01G215000.1	Wheat	nucleus	27.27	30.55
TraesCS4B01G117100.1	Wheat	nucleus	26.3	29.03
Os02t0764100-01	Rice	mitochondrion	22.08	26.88
TraesCS4B01G348500.1	Wheat	nucleus	26.95	26.02
TraesCS2B01G412700.1	Wheat	nucleus	32.47	24.45
TraesCS6B01G286900.1	Wheat	nucleus	31.17	23.47

Protein Annotations

MapMan:15.5.5.3	MapMan:15.5.7.5	Gene3D:2.40.330.10	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:B3_DNA-bd	InterPro:DNA-bd_dom_sf	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR003340	InterPro:IPR015300
InterPro:IPR036955	PFAM:PF00847	PFAM:PF02362	PIRSF:PIRSF038123	PFscan:PS50863	PFscan:PS51032
PANTHER:PTHR31140	PANTHER:PTHR31140:SF9	SMART:SM00380	SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF54171
EnsemblPlantsGene:TraesCS4B01G325600	EnsemblPlants:TraesCS4B01G325600.1	TIGR:cd00018	TIGR:cd10017	SEG:seg	:

Description

No Description!

Coordinates

chr4B:-:616735800..616736726

Molecular Weight (calculated)

33344.5 Da

IEP (calculated)

6.320

GRAVY (calculated)

-0.605

Length

308 amino acids

Sequence
(BLAST)

001: MASSKPTNPE IDNGMECSSP ESGAEDAVES SSPAPAPSSR FKGVVPQPNG RWGAQIYEKH SRVWLGTFAD EESAARAYDV AALRFRGRDA VTNYQHPLAA
101: EGASSSSTSE LAFLADHSKA EIVDMLRKHT YADELRQGLR RGHGRAQPTP AWAREFLFEK AVTPSDVGKL NRLVVPKQHA EKHFPPTTAA ATGSNGKGLL
201: LNFEDGEGKV WRFRYSYWNS SQSYVLTKGW SRFVREKGLC AGDTVTFSRS AYVMNDTDEQ LFIDYKQSNK NDEAADAATA DENEAGHVAV KLFGVDIGGG
301: GMGGSSGG

Best Arabidopsis Sequence Match ( AT3G25730.1 )
(BLAST)

001: MDAMSSVDES STTTDSIPAR KSSSPASLLY RMGSGTSVVL DSENGVEVEV EAESRKLPSS RFKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAAHRFRGRD AVTNFKDTTF EEEVEFLNAH SKSEIVDMLR KHTYKEELDQ RKRNRDGNGK ETTAFALASM VVMTGFKTAE LLFEKTVTPS DVGKLNRLVI
201: PKHQAEKHFP LPLGNNNVSV KGMLLNFEDV NGKVWRFRYS YWNSSQSYVL TKGWSRFVKE KRLCAGDLIS FKRSNDQDQK FFIGWKSKSG LDLETGRVMR
301: LFGVDISLNA VVVVKETTEV LMSSLRCKKQ RVL

Arabidopsis Description

ARF14AP2/ERF and B3 domain-containing transcription factor ARF14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS06]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.