Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G198300.2 | Wheat | nucleus | 77.06 | 77.06 |
| TraesCS4B01G117100.1 | Wheat | nucleus | 76.7 | 76.7 |
| TraesCS4D01G114900.1 | Wheat | nucleus | 75.63 | 74.82 |
| HORVU5Hr1G040620.4 | Barley | nucleus | 64.52 | 65.69 |
| KXG27771 | Sorghum | nucleus | 63.8 | 64.96 |
| Os11t0156000-01 | Rice | nucleus | 63.8 | 63.8 |
| Zm00001d052591_P001 | Maize | nucleus | 59.86 | 54.4 |
| GSMUA_Achr9P02600_001 | Banana | nucleus | 37.28 | 53.89 |
| GSMUA_Achr3P19210_001 | Banana | nucleus | 37.99 | 52.74 |
| GSMUA_Achr6P13140_001 | Banana | nucleus | 44.44 | 50.2 |
| GSMUA_Achr6P35600_001 | Banana | nucleus | 43.37 | 50.0 |
| GSMUA_Achr9P08980_001 | Banana | nucleus | 27.96 | 48.15 |
| HORVU4Hr1G074300.4 | Barley | nucleus | 24.37 | 45.33 |
| CDY62470 | Canola | nucleus | 36.92 | 45.18 |
| CDX73868 | Canola | nucleus | 37.63 | 44.49 |
| Bra001411.1-P | Field mustard | nucleus | 37.63 | 44.49 |
| AT2G36080.1 | Thale cress | nucleus | 38.71 | 44.26 |
| Bra017262.1-P | Field mustard | nucleus | 37.99 | 43.27 |
| CDX84162 | Canola | nucleus | 37.63 | 43.21 |
| CDY43751 | Canola | nucleus | 37.63 | 43.21 |
| Bra005301.1-P | Field mustard | nucleus | 37.63 | 42.34 |
| CDX75073 | Canola | nucleus | 37.63 | 42.34 |
| HORVU3Hr1G064590.1 | Barley | nucleus | 29.03 | 41.75 |
| CDY01036 | Canola | nucleus | 38.35 | 41.63 |
| CDY08512 | Canola | nucleus | 36.92 | 41.53 |
| Bra034828.1-P | Field mustard | nucleus | 38.35 | 41.47 |
| Bra041023.1-P | Field mustard | nucleus | 39.07 | 41.29 |
| GSMUA_Achr11P... | Banana | nucleus | 26.16 | 39.46 |
| CDY47260 | Canola | nucleus | 35.84 | 37.45 |
| Bra005886.1-P | Field mustard | nucleus | 35.84 | 37.45 |
| VIT_08s0007g02810.t01 | Wine grape | nucleus | 36.92 | 36.14 |
| HORVU0Hr1G022200.1 | Barley | nucleus | 25.81 | 36.0 |
| CDX80996 | Canola | nucleus | 35.48 | 36.0 |
| AT5G06250.4 | Thale cress | nucleus | 36.56 | 35.92 |
| KRH67965 | Soybean | nucleus | 36.92 | 35.76 |
| KRG96220 | Soybean | nucleus | 37.63 | 35.12 |
| KRH32791 | Soybean | nucleus | 41.94 | 34.72 |
| PGSC0003DMT400072354 | Potato | nucleus | 35.13 | 34.03 |
| KRH72242 | Soybean | nucleus | 40.86 | 33.14 |
| Solyc10g083210.1.1 | Tomato | nucleus | 35.48 | 32.14 |
| HORVU7Hr1G046950.1 | Barley | nucleus | 31.18 | 31.75 |
| HORVU1Hr1G051780.2 | Barley | nucleus | 32.62 | 31.06 |
| HORVU3Hr1G010200.1 | Barley | mitochondrion | 24.37 | 31.05 |
| HORVU7Hr1G002230.1 | Barley | nucleus | 24.01 | 30.45 |
| Solyc09g010230.1.1 | Tomato | nucleus | 37.63 | 30.43 |
| PGSC0003DMT400023077 | Potato | nucleus | 35.84 | 29.85 |
| HORVU4Hr1G084950.3 | Barley | nucleus | 36.2 | 29.62 |
| AT3G11580.3 | Thale cress | cytosol, endoplasmic reticulum, nucleus | 37.99 | 28.57 |
| CDY70080 | Canola | nucleus | 24.37 | 28.45 |
| CDX98911 | Canola | nucleus | 24.37 | 28.45 |
| Bra009171.1-P | Field mustard | nucleus | 24.37 | 28.45 |
| GSMUA_Achr6P18320_001 | Banana | nucleus | 31.18 | 25.59 |
| HORVU3Hr1G010100.2 | Barley | nucleus | 27.96 | 24.38 |
| HORVU6Hr1G066190.2 | Barley | nucleus | 35.48 | 24.21 |
| HORVU4Hr1G082090.2 | Barley | mitochondrion | 28.32 | 22.97 |
| HORVU3Hr1G064640.4 | Barley | nucleus | 31.18 | 22.89 |
| HORVU3Hr1G010060.1 | Barley | nucleus | 27.96 | 22.16 |
| HORVU1Hr1G082670.6 | Barley | nucleus | 30.11 | 21.37 |
| HORVU3Hr1G010240.1 | Barley | nucleus | 26.52 | 21.26 |
| HORVU3Hr1G010190.5 | Barley | nucleus | 26.52 | 19.27 |
| HORVU3Hr1G010140.3 | Barley | nucleus | 25.81 | 18.56 |
| HORVU4Hr1G082030.2 | Barley | nucleus | 16.49 | 18.11 |
| HORVU3Hr1G010260.2 | Barley | mitochondrion | 11.47 | 16.16 |
Protein Annotations
| MapMan:15.5.5.3 | Gene3D:2.40.330.10 | UniProt:A0A287NHU3 | InterPro:B3_DNA-bd | InterPro:DNA-bd_pseudobarrel_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:HORVU4Hr1G021650 | EnsemblPlants:HORVU4Hr1G021650.22 | InterPro:IPR003340 | InterPro:IPR015300 |
| PFAM:PF02362 | PFscan:PS50863 | PANTHER:PTHR31140 | PANTHER:PTHR31140:SF19 | SMART:SM01019 | SUPFAM:SSF101936 |
| UniParc:UPI000B46C436 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:112471521..112472423
Molecular Weight (calculated)
31732.5 Da
IEP (calculated)
10.637
GRAVY (calculated)
-0.887
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMNPLSQEH PNAWPWGVAM YTNLHYQQYH YEKEHLFEKA LTPSDVGKLN RLVIPKQHAE RCFPLGGESG EKGLLLSFDD EAGKPWRFRY SYWTSSQSYV
101: LTKGWSRYVK EKHLDAGDVV HFERVRGLGT GDRLFIGCRR RGDVSAPTAV PPPPAVRVVP ASGHNPREQQ PWSPMCYSTS GSYPTSPATS HAYRRSAEHD
201: HSDMHHAGHF CGMNNRRRTP VGRRRQKLQP SLGTDTPAQV VRREPRLRAR ARGRSRAGDV RLRAPEPLRR HVSSSQQPV
101: LTKGWSRYVK EKHLDAGDVV HFERVRGLGT GDRLFIGCRR RGDVSAPTAV PPPPAVRVVP ASGHNPREQQ PWSPMCYSTS GSYPTSPATS HAYRRSAEHD
201: HSDMHHAGHF CGMNNRRRTP VGRRRQKLQP SLGTDTPAQV VRREPRLRAR ARGRSRAGDV RLRAPEPLRR HVSSSQQPV
001: MSINQYSSDF HYHSLMWQQQ QQQQQHQNDV VEEKEALFEK PLTPSDVGKL NRLVIPKQHA ERYFPLAAAA ADAVEKGLLL CFEDEEGKPW RFRYSYWNSS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS
101: QSYVLTKGWS RYVKEKHLDA GDVVLFHRHR SDGGRFFIGW RRRGDSSSSS DSYRHVQSNA SLQYYPHAGA QAVESQRGNS KTLRLFGVNM ECQLDSDWSE
201: PSTPDGSNTY TTNHDQFHFY PQQQHYPPPY YMDISFTGDM NRTS
Arabidopsis Description
ARF31B3 domain-containing protein At2g36080 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYJ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.