Factsheet for HORVU1Hr1G082670.6

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G372300.1	Wheat	nucleus	89.31	89.54
TraesCS1D01G378900.1	Wheat	nucleus	89.31	89.54
TraesCS1B01G392300.1	Wheat	nucleus	87.53	87.98
TraesCS1B01G392000.1	Wheat	nucleus	87.53	83.7
TraesCS1A01G372200.1	Wheat	nucleus	84.73	80.63
TraesCS1B01G392200.1	Wheat	nucleus, plastid	84.73	80.05
TraesCS1D01G378500.1	Wheat	nucleus	85.24	79.95
TraesCS1D01G378400.1	Wheat	nucleus	83.72	79.85
TraesCS1D01G378800.1	Wheat	nucleus	83.97	79.52
TraesCS1A01G372100.1	Wheat	nucleus	85.5	76.02
Os05t0549800-01	Rice	nucleus	62.09	71.14
Zm00001d009468_P001	Maize	nucleus, plastid	66.67	69.87
KXG22484	Sorghum	nucleus, plastid	71.76	69.12
HORVU3Hr1G064640.4	Barley	nucleus	65.9	68.16
HORVU3Hr1G064590.1	Barley	nucleus	31.81	64.43
GSMUA_Achr1P21250_001	Banana	nucleus	44.53	59.52
CDX97996	Canola	nucleus	46.56	56.31
CDY72302	Canola	nucleus	46.56	56.13
HORVU4Hr1G074300.4	Barley	nucleus	21.37	56.0
KRH34761	Soybean	nucleus	49.87	55.84
CDY58354	Canola	nucleus	46.31	55.83
CDY61361	Canola	nucleus	46.06	55.35
CDY40973	Canola	nucleus	44.02	54.92
AT1G68840.1	Thale cress	nucleus	49.11	54.83
CDY24391	Canola	nucleus	47.07	54.73
CDX84999	Canola	nucleus	49.11	54.52
KRG92025	Soybean	nucleus	50.13	54.42
Bra026917.1-P	Field mustard	nucleus	47.07	54.41
CDY36099	Canola	nucleus	48.35	54.29
AT1G13260.1	Thale cress	nucleus	47.33	54.07
Bra019821.1-P	Field mustard	nucleus	46.82	53.96
CDX81561	Canola	nucleus	47.07	53.94
CDY16133	Canola	nucleus	48.85	53.63
AT3G25730.1	Thale cress	nucleus	45.04	53.15
Bra011002.1-P	Field mustard	nucleus	48.35	52.92
CDY45849	Canola	nucleus, plastid	47.07	52.86
Bra038346.1-P	Field mustard	nucleus, plastid	47.07	52.86
VIT_01s0011g03070.t01	Wine grape	nucleus	50.13	52.12
AT1G25560.1	Thale cress	nucleus	47.84	52.08
Bra026509.1-P	Field mustard	nucleus	43.0	51.84
CDX99755	Canola	nucleus	44.78	51.76
GSMUA_Achr6P01420_001	Banana	nucleus	41.48	51.58
KRH75484	Soybean	nucleus	50.38	51.56
Bra024735.1-P	Field mustard	nucleus	48.6	51.34
KRH70603	Soybean	nucleus	51.65	50.62
HORVU3Hr1G010100.2	Barley	nucleus	40.46	49.69
CDX83547	Canola	nucleus	40.71	49.38
Solyc05g009790.1.1	Tomato	nucleus	49.36	49.11
PGSC0003DMT400002125	Potato	nucleus	49.62	48.99
HORVU3Hr1G010240.1	Barley	nucleus	42.75	48.28
HORVU4Hr1G082090.2	Barley	mitochondrion	40.97	46.8
HORVU3Hr1G010200.1	Barley	mitochondrion	25.95	46.58
HORVU4Hr1G082030.2	Barley	nucleus	29.77	46.06
HORVU3Hr1G010060.1	Barley	nucleus	40.46	45.17
HORVU3Hr1G010190.5	Barley	nucleus	42.49	43.49
HORVU0Hr1G022200.1	Barley	nucleus	21.12	41.5
HORVU7Hr1G002230.1	Barley	nucleus	22.14	39.55
HORVU1Hr1G051780.2	Barley	nucleus	23.66	31.74
HORVU5Hr1G040620.4	Barley	nucleus	21.63	31.02
HORVU4Hr1G021650.22	Barley	nucleus	21.37	30.11
HORVU7Hr1G046950.1	Barley	nucleus	19.59	28.1
HORVU4Hr1G084950.3	Barley	nucleus	23.66	27.27
HORVU6Hr1G066190.2	Barley	nucleus	27.23	26.16
HORVU3Hr1G010140.3	Barley	nucleus	25.19	25.52
HORVU3Hr1G010260.2	Barley	mitochondrion	12.72	25.25

Protein Annotations

MapMan:15.5.5.3	MapMan:15.5.7.5	Gene3D:2.40.330.10	Gene3D:3.30.730.10	UniProt:A0A287GHZ6	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	InterPro:B3_DNA-bd	InterPro:DNA-bd_dom_sf	InterPro:DNA-bd_pseudobarrel_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU1Hr1G082670	EnsemblPlants:HORVU1Hr1G082670.6	InterPro:IPR001471	InterPro:IPR003340
InterPro:IPR015300	InterPro:IPR036955	PFAM:PF00847	PFAM:PF02362	PFscan:PS50863	PFscan:PS51032
PANTHER:PTHR31140	PANTHER:PTHR31140:SF21	SMART:SM00380	SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF54171
UniParc:UPI000B4771C4	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:530231489..530233562

Molecular Weight (calculated)

42145.5 Da

IEP (calculated)

10.102

GRAVY (calculated)

-0.488

Length

393 amino acids

Sequence
(BLAST)

001: MDSARSCLVD DASSGGSTGK KASPAPPAPT TKPLQRVGSG ASTVMDAPEP GAEADSGRGG RLPSSKYKGV VPQPNGRWGA QIYERHQRVW LGTFTGEAEA
101: ARAYDAAAQR FRGRDAVTNF RPLAESDPDD AAELRFLAAR SKAEVVDLLR KHTYPDELTQ HKRAYFAAAA ASSPTPSSLP PASSPSSGAA TPSPAARRDH
201: LFDKTVTPSD VGKLNRLVIP KQHAEKHFPL QLPSAGAAVS GECKGMLLNF DDAAGKVWRF RYSYWNSSQS YVLTKGWSRF VKDKGLKAGD AVEFYRAASG
301: NSQLFIDCKL RSKTTTTTTF VNATVSTPSP APVMRTVRLF GVDLLTAPAP RHAPEHDDYG TAKTNKRSMD ATSVALTPAH AVWKKQCIDL ALT

Best Arabidopsis Sequence Match ( AT1G13260.1 )
(BLAST)

001: MESSSVDEST TSTGSICETP AITPAKKSSV GNLYRMGSGS SVVLDSENGV EAESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAVHRFRRRD AVTNFKDVKM DEDEVDFLNS HSKSEIVDML RKHTYNEELE QSKRRRNGNG NMTRTLLTSG LSNDGVSTTG FRSAEALFEK AVTPSDVGKL
201: NRLVIPKHHA EKHFPLPSSN VSVKGVLLNF EDVNGKVWRF RYSYWNSSQS YVLTKGWSRF VKEKNLRAGD VVSFSRSNGQ DQQLYIGWKS RSGSDLDAGR
301: VLRLFGVNIS PESSRNDVVG NKRVNDTEML SLVCSKKQRI FHAS

Arabidopsis Description

RAV1AP2/ERF and B3 domain-containing transcription factor RAV1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWM9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.