Factsheet for Bra024735.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16133	Canola	nucleus	95.7	99.44
CDX84999	Canola	nucleus	93.55	98.31
Bra011002.1-P	Field mustard	nucleus	81.99	84.96
AT1G25560.1	Thale cress	nucleus	81.99	84.49
Bra038346.1-P	Field mustard	nucleus, plastid	67.2	71.43
Bra019821.1-P	Field mustard	nucleus	61.56	67.16
Bra026917.1-P	Field mustard	nucleus	60.48	66.18
Bra026509.1-P	Field mustard	nucleus	55.11	62.88
KRH34761	Soybean	nucleus	59.14	62.68
GSMUA_Achr5P09950_001	Banana	nucleus	53.76	62.11
VIT_01s0011g03070.t01	Wine grape	nucleus	62.9	61.9
KRG92025	Soybean	nucleus	58.33	59.94
KRH75484	Soybean	nucleus	61.56	59.64
GSMUA_Achr1P05400_001	Banana	nucleus	47.04	58.72
KRH70603	Soybean	nucleus	61.56	57.11
Solyc05g009790.1.1	Tomato	nucleus	60.48	56.96
PGSC0003DMT400002125	Potato	nucleus	60.48	56.53
GSMUA_Achr3P29380_001	Banana	nucleus	38.98	55.13
GSMUA_Achr4P03670_001	Banana	nucleus	43.28	54.76
GSMUA_Achr10P...	Banana	nucleus	42.74	54.45
TraesCS3D01G260100.1	Wheat	nucleus	54.3	54.01
GSMUA_Achr6P09880_001	Banana	nucleus	41.67	53.63
TraesCS3A01G259900.1	Wheat	nucleus	53.49	53.07
TraesCS3B01G293000.1	Wheat	nucleus	54.57	53.0
GSMUA_Achr2P22560_001	Banana	nucleus	43.82	52.58
Zm00001d043782_P001	Maize	nucleus	54.03	51.67
HORVU3Hr1G064640.4	Barley	nucleus	52.69	51.58
Os01t0693400-01	Rice	nucleus	54.3	51.4
Zm00001d009468_P001	Maize	nucleus, plastid	51.34	50.93
GSMUA_Achr4P06710_001	Banana	nucleus	47.58	50.57
Os05t0549800-01	Rice	nucleus	46.51	50.44
HORVU3Hr1G064590.1	Barley	nucleus	25.81	49.48
TraesCS1B01G392300.1	Wheat	nucleus	51.88	49.36
GSMUA_AchrUn_...	Banana	nucleus	49.46	49.2
TraesCS1A01G372300.1	Wheat	nucleus	51.61	48.98
TraesCS1D01G378900.1	Wheat	nucleus	51.61	48.98
HORVU1Hr1G082670.6	Barley	nucleus	51.34	48.6
EES03472	Sorghum	nucleus, plastid	53.76	48.43
Zm00001d011639_P001	Maize	nucleus	52.42	48.15
KXG22484	Sorghum	nucleus, plastid	52.69	48.04
HORVU4Hr1G074300.4	Barley	nucleus	19.35	48.0
Zm00001d038907_P001	Maize	nucleus, plastid	52.15	47.78
GSMUA_Achr9P21470_001	Banana	nucleus	39.52	47.42
TraesCS1B01G392000.1	Wheat	nucleus	51.34	46.47
TraesCS1A01G372200.1	Wheat	nucleus	51.08	46.0
TraesCS1D01G378400.1	Wheat	nucleus	50.81	45.87
TraesCS1D01G378800.1	Wheat	nucleus	50.54	45.3
TraesCS1B01G392200.1	Wheat	nucleus, plastid	50.27	44.95
TraesCS1D01G378500.1	Wheat	nucleus	50.54	44.87
TraesCS1A01G372100.1	Wheat	nucleus	49.19	41.4
GSMUA_Achr3P21100_001	Banana	nucleus	44.89	40.53
Bra001411.1-P	Field mustard	nucleus	22.04	34.75
Bra017262.1-P	Field mustard	nucleus	22.85	34.69
Bra005301.1-P	Field mustard	nucleus	22.31	33.47
Bra041023.1-P	Field mustard	nucleus	23.12	32.58
Bra030458.1-P	Field mustard	nucleus	27.42	32.28
Bra034828.1-P	Field mustard	nucleus	22.31	32.17
Bra018868.1-P	Field mustard	nucleus	28.49	31.36
Bra030476.1-P	Field mustard	nucleus	26.88	30.77
Bra005886.1-P	Field mustard	nucleus	22.04	30.71
Bra018894.1-P	Field mustard	nucleus	27.69	30.47
Bra014282.1-P	Field mustard	nucleus	27.69	30.38
Bra003482.1-P	Field mustard	nucleus	22.85	29.72
Bra018854.1-P	Field mustard	nucleus	27.15	29.71
Bra040478.1-P	Field mustard	nucleus	23.39	29.69
Bra007646.1-P	Field mustard	nucleus	23.12	29.45
Bra018869.1-P	Field mustard	nucleus	26.08	29.04
Bra004501.1-P	Field mustard	nucleus	23.12	28.96
Bra000434.1-P	Field mustard	nucleus	23.39	28.06
Bra033294.1-P	Field mustard	nucleus	24.46	26.45
Bra014415.1-P	Field mustard	nucleus	22.58	26.25
Bra030497.1-P	Field mustard	nucleus	24.46	25.71
Bra008552.1-P	Field mustard	nucleus	22.58	24.85
Bra037417.1-P	Field mustard	nucleus	19.35	23.23
Bra009171.1-P	Field mustard	nucleus	13.98	21.76

Protein Annotations

MapMan:15.5.5.3	MapMan:15.5.7.5	Gene3D:2.40.330.10	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:B3_DNA-bd	EnsemblPlantsGene:Bra024735	EnsemblPlants:Bra024735.1	EnsemblPlants:Bra024735.1-P	InterPro:DNA-bd_dom_sf	InterPro:DNA-bd_pseudobarrel_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR003340
InterPro:IPR015300	InterPro:IPR036955	UniProt:M4E7I0	PFAM:PF00847	PFAM:PF02362	PFscan:PS50863
PFscan:PS51032	PANTHER:PTHR31140	PANTHER:PTHR31140:SF9	SMART:SM00380	SMART:SM01019	SUPFAM:SSF101936
SUPFAM:SSF54171	UniParc:UPI0002542737	SEG:seg	:	:	:

Description

AT1G25560 (E=6e-150) TEM1 | TEM1 (TEMPRANILLO 1); transcription factor

Coordinates

chrA09:-:23226388..23227506

Molecular Weight (calculated)

41071.7 Da

IEP (calculated)

9.959

GRAVY (calculated)

-0.573

Length

372 amino acids

Sequence
(BLAST)

001: MDNSCIDDST SNTSGSLSTS TLSAKKKLSP PPPPPATMRL YRMGSGGSSV VLDSENGVET ESRKLPSSKF KGVVPQPNGR WGAQIYEKHQ RVWLGTFNEE
101: EEAAASYDIA ARRFRGRDAV TNFKSPALDG TDAESAFLEA HSKAEIVDML RKHTYADELQ QSKRKFLDGN GKRCGSGTAA MSKGNDGVSR AREVLFEKAV
201: TPSDVGKLNR LVIPKQHAEK HFPLPAMTTA TVVTAMTPSP TKGVLINLED RTGKVWRFRY SYWNSSQSYV LTKGWSRFVK EKNLRAGDVV CFERSTGPDR
301: QLYIDWKVQS GKEEITPVQS VVRLFGVNIF NETTNAKPND VAVECGGKKR SREVDLFALG CSKKQTMMIN AL

Best Arabidopsis Sequence Match ( AT1G25560.1 )
(BLAST)

001: MEYSCVDDSS TTSESLSIST TPKPTTTTEK KLSSPPATSM RLYRMGSGGS SVVLDSENGV ETESRKLPSS KYKGVVPQPN GRWGAQIYEK HQRVWLGTFN
101: EEEEAASSYD IAVRRFRGRD AVTNFKSQVD GNDAESAFLD AHSKAEIVDM LRKHTYADEF EQSRRKFVNG DGKRSGLETA TYGNDAVLRA REVLFEKTVT
201: PSDVGKLNRL VIPKQHAEKH FPLPAMTTAM GMNPSPTKGV LINLEDRTGK VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVCFER STGPDRQLYI
301: HWKVRSSPVQ TVVRLFGVNI FNVSNEKPND VAVECVGKKR SREDDLFSLG CSKKQAIINI L

Arabidopsis Description

TEM1AP2/ERF and B3 domain-containing transcription repressor TEM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6M5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.