Factsheet for AT3G25730.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40973	Canola	nucleus	75.98	80.32
Bra026509.1-P	Field mustard	nucleus	77.18	78.83
CDX99755	Canola	nucleus	79.58	77.94
CDX83547	Canola	nucleus	75.38	77.47
AT1G13260.1	Thale cress	nucleus	75.08	72.67
AT1G68840.1	Thale cress	nucleus	61.56	58.24
AT1G25560.1	Thale cress	nucleus	61.56	56.79
GSMUA_Achr5P09950_001	Banana	nucleus	54.35	56.21
VIT_01s0011g03070.t01	Wine grape	nucleus	63.36	55.82
KRH34761	Soybean	nucleus	57.66	54.7
GSMUA_Achr1P05400_001	Banana	nucleus	48.35	54.03
KRG92025	Soybean	nucleus	58.56	53.87
GSMUA_Achr4P03670_001	Banana	nucleus	46.85	53.06
Solyc05g009790.1.1	Tomato	nucleus	62.76	52.91
PGSC0003DMT400002125	Potato	nucleus	63.06	52.76
KRH75484	Soybean	nucleus	60.06	52.08
GSMUA_Achr10P...	Banana	nucleus	45.65	52.05
GSMUA_Achr3P29380_001	Banana	nucleus	40.84	51.71
GSMUA_Achr2P22560_001	Banana	nucleus	47.15	50.65
GSMUA_Achr6P09880_001	Banana	nucleus	43.54	50.17
HORVU4Hr1G074300.4	Barley	nucleus	22.52	50.0
KRH70603	Soybean	nucleus	60.06	49.88
TraesCS3D01G260100.1	Wheat	nucleus	55.26	49.2
TraesCS3A01G259900.1	Wheat	nucleus	54.65	48.53
TraesCS3B01G293000.1	Wheat	nucleus	55.56	48.3
HORVU3Hr1G064640.4	Barley	nucleus	54.65	47.89
Zm00001d009468_P001	Maize	nucleus, plastid	53.75	47.73
Zm00001d043782_P001	Maize	nucleus	55.26	47.3
GSMUA_Achr4P06710_001	Banana	nucleus	49.55	47.14
Os05t0549800-01	Rice	nucleus	48.35	46.94
Os01t0693400-01	Rice	nucleus	55.26	46.82
GSMUA_Achr9P21470_001	Banana	nucleus	43.24	46.45
TraesCS1D01G378900.1	Wheat	nucleus	54.05	45.92
TraesCS1A01G372300.1	Wheat	nucleus	54.05	45.92
TraesCS1B01G392300.1	Wheat	nucleus	53.75	45.78
HORVU3Hr1G064590.1	Barley	nucleus	26.43	45.36
GSMUA_AchrUn_...	Banana	nucleus	50.75	45.19
KXG22484	Sorghum	nucleus, plastid	55.26	45.1
HORVU1Hr1G082670.6	Barley	nucleus	53.15	45.04
EES03472	Sorghum	nucleus, plastid	55.56	44.79
Zm00001d038907_P001	Maize	nucleus, plastid	54.35	44.58
Zm00001d011639_P001	Maize	nucleus	53.15	43.7
TraesCS1B01G392000.1	Wheat	nucleus	52.85	42.82
TraesCS1B01G392200.1	Wheat	nucleus, plastid	53.45	42.79
TraesCS1D01G378400.1	Wheat	nucleus	52.85	42.72
TraesCS1A01G372200.1	Wheat	nucleus	52.85	42.62
TraesCS1D01G378800.1	Wheat	nucleus	52.55	42.17
TraesCS1D01G378500.1	Wheat	nucleus	52.85	42.0
TraesCS1A01G372100.1	Wheat	nucleus	53.15	40.05
GSMUA_Achr3P21100_001	Banana	nucleus	46.85	37.86
AT2G36080.1	Thale cress	nucleus	25.23	34.43
AT5G06250.4	Thale cress	nucleus	24.92	29.23
AT1G50680.1	Thale cress	nucleus	29.43	29.08
AT1G51120.1	Thale cress	nucleus	29.43	27.84
AT2G46870.1	Thale cress	nucleus	24.62	26.45
AT4G01500.1	Thale cress	nucleus	26.13	26.13
AT3G61970.1	Thale cress	nucleus	23.12	25.75
AT1G01030.1	Thale cress	nucleus	25.23	23.46
AT3G11580.3	Thale cress	cytosol, endoplasmic reticulum, nucleus	23.72	21.29

Protein Annotations

MapMan:15.5.5.3	MapMan:15.5.7.5	Gene3D:2.40.330.10	Gene3D:3.30.730.10	EntrezGene:822164	UniProt:A0A178VJD4
ProteinID:AEE77062.1	EMBL:AJ441073	EMBL:AK229415	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ArrayExpress:AT3G25730
EnsemblPlantsGene:AT3G25730	RefSeq:AT3G25730	TAIR:AT3G25730	RefSeq:AT3G25730-TAIR-G	EnsemblPlants:AT3G25730.1	TAIR:AT3G25730.1
EMBL:AY087951	InterPro:B3_DNA-bd	ProteinID:BAA95760.1	InterPro:DNA-bd_dom_sf	InterPro:DNA-bd_pseudobarrel_sf	Symbol:EDF3
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719
GO:GO:0009873	GO:GO:0009987	GO:GO:0043565	GO:GO:0044212	InterPro:IPR001471	InterPro:IPR003340
InterPro:IPR015300	InterPro:IPR036955	RefSeq:NP_189201.1	ProteinID:OAP06439.1	PFAM:PF00847	PFAM:PF02362
PO:PO:0000293	PO:PO:0007611	PO:PO:0009005	PO:PO:0009010	PO:PO:0009046	PO:PO:0020030
PO:PO:0020100	PFscan:PS50863	PFscan:PS51032	PANTHER:PTHR31140	PANTHER:PTHR31140:SF9	UniProt:Q9LS06
SMART:SM00380	SMART:SM01019	SUPFAM:SSF101936	SUPFAM:SSF54171	UniParc:UPI00000A79AE	SEG:seg

Description

ARF14AP2/ERF and B3 domain-containing transcription factor ARF14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS06]

Coordinates

chr3:+:9396272..9397766

Molecular Weight (calculated)

37757.9 Da

IEP (calculated)

9.722

GRAVY (calculated)

-0.534

Length

333 amino acids

Sequence
(BLAST)

001: MDAMSSVDES STTTDSIPAR KSSSPASLLY RMGSGTSVVL DSENGVEVEV EAESRKLPSS RFKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAAHRFRGRD AVTNFKDTTF EEEVEFLNAH SKSEIVDMLR KHTYKEELDQ RKRNRDGNGK ETTAFALASM VVMTGFKTAE LLFEKTVTPS DVGKLNRLVI
201: PKHQAEKHFP LPLGNNNVSV KGMLLNFEDV NGKVWRFRYS YWNSSQSYVL TKGWSRFVKE KRLCAGDLIS FKRSNDQDQK FFIGWKSKSG LDLETGRVMR
301: LFGVDISLNA VVVVKETTEV LMSSLRCKKQ RVL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.