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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY40973 Canola nucleus 76.54 78.73
CDX99755 Canola nucleus 81.17 77.35
Bra026509.1-P Field mustard nucleus 77.16 76.69
AT3G25730.1 Thale cress nucleus 77.47 75.38
CDX97996 Canola nucleus 68.21 68.0
CDY72302 Canola nucleus 67.9 67.48
CDY61361 Canola nucleus 67.59 66.97
CDY58354 Canola nucleus 66.67 66.26
CDY24391 Canola nucleus 58.02 55.62
CDX84999 Canola nucleus 59.57 54.52
CDY16133 Canola nucleus 58.95 53.35
GSMUA_Achr10P... Banana nucleus 47.84 53.08
CDY36099 Canola nucleus 57.1 52.86
CDX81561 Canola nucleus 55.56 52.48
CDY45849 Canola nucleus, plastid 56.17 52.0
GSMUA_Achr4P03670_001 Banana nucleus 46.6 51.36
GSMUA_Achr5P09950_001 Banana nucleus 50.93 51.24
VIT_01s0011g03070.t01 Wine grape nucleus 58.64 50.26
GSMUA_Achr1P05400_001 Banana nucleus 45.68 49.66
KRH34761 Soybean nucleus 53.4 49.29
PGSC0003DMT400002125 Potato nucleus 60.49 49.25
Solyc05g009790.1.1 Tomato nucleus 59.88 49.11
KRG92025 Soybean nucleus 53.7 48.07
KRH75484 Soybean nucleus 56.48 47.66
KRH70603 Soybean nucleus 57.41 46.38
GSMUA_Achr3P29380_001 Banana nucleus 37.04 45.63
GSMUA_Achr2P22560_001 Banana nucleus 43.52 45.48
GSMUA_Achr9P21470_001 Banana nucleus 43.21 45.16
TraesCS3D01G260100.1 Wheat nucleus 51.54 44.65
GSMUA_Achr6P09880_001 Banana nucleus 39.81 44.64
TraesCS3B01G293000.1 Wheat nucleus 52.16 44.13
TraesCS3A01G259900.1 Wheat nucleus 50.93 44.0
Zm00001d009468_P001 Maize nucleus, plastid 50.62 43.73
Zm00001d043782_P001 Maize nucleus 51.23 42.67
HORVU3Hr1G064640.4 Barley nucleus 50.0 42.63
TraesCS1A01G372300.1 Wheat nucleus 50.62 41.84
TraesCS1D01G378900.1 Wheat nucleus 50.62 41.84
Os01t0693400-01 Rice nucleus 50.62 41.73
GSMUA_Achr4P06710_001 Banana nucleus 45.06 41.71
TraesCS1B01G392300.1 Wheat nucleus 50.31 41.69
Os05t0549800-01 Rice nucleus 43.52 41.11
HORVU1Hr1G082670.6 Barley nucleus 49.38 40.71
Zm00001d038907_P001 Maize nucleus, plastid 50.93 40.64
EES03472 Sorghum nucleus, plastid 51.54 40.44
Zm00001d011639_P001 Maize nucleus 50.31 40.25
KXG22484 Sorghum nucleus, plastid 50.31 39.95
GSMUA_AchrUn_... Banana nucleus 45.99 39.84
TraesCS1D01G378400.1 Wheat nucleus 50.0 39.32
TraesCS1A01G372200.1 Wheat nucleus 50.0 39.23
TraesCS1B01G392200.1 Wheat nucleus, plastid 50.31 39.18
TraesCS1B01G392000.1 Wheat nucleus 49.07 38.69
TraesCS1D01G378800.1 Wheat nucleus 49.38 38.55
TraesCS1D01G378500.1 Wheat nucleus 49.38 38.19
TraesCS1A01G372100.1 Wheat nucleus 49.07 35.97
HORVU4Hr1G074300.4 Barley nucleus 16.05 34.67
HORVU3Hr1G064590.1 Barley nucleus 20.37 34.02
GSMUA_Achr3P21100_001 Banana nucleus 42.9 33.74
CDY67348 Canola nucleus 13.89 30.0
CDY43751 Canola nucleus 19.44 25.93
CDX84162 Canola nucleus 19.44 25.93
CDX75073 Canola nucleus 19.44 25.4
CDX73868 Canola nucleus 18.21 25.0
CDY37109 Canola nucleus 25.62 24.92
CDY29599 Canola nucleus 25.0 24.92
CDY65812 Canola nucleus 21.6 24.91
CDY37130 Canola nucleus 25.93 24.78
CDY22814 Canola nucleus 25.62 24.63
CDY22826 Canola nucleus 25.62 24.56
CDY51249 Canola nucleus 25.62 24.48
CDY46564 Canola nucleus 25.62 24.48
CDY08512 Canola nucleus 18.21 23.79
CDY29620 Canola nucleus 25.0 23.55
CDY35575 Canola nucleus 25.0 23.48
CDY25209 Canola nucleus 25.62 23.38
CDY62470 Canola nucleus 16.36 23.25
CDY37108 Canola nucleus, plastid 24.38 23.03
CDY01036 Canola nucleus 18.21 22.96
CDY22801 Canola nucleus 24.38 22.7
CDY47260 Canola nucleus 17.9 21.72
CDX80053 Canola nucleus 19.75 21.55
CDY15208 Canola nucleus 21.3 21.43
CDY69432 Canola nucleus 18.21 21.22
CDY41564 Canola nucleus 19.44 21.21
CDX67872 Canola nucleus 18.52 21.05
CDY43060 Canola cytosol 10.49 20.86
CDX80996 Canola nucleus 17.59 20.73
CDX97251 Canola nucleus 21.6 20.65
CDX76605 Canola nucleus 18.52 20.55
CDY11388 Canola nucleus 18.52 20.55
CDX83351 Canola nucleus 19.44 20.45
CDY27515 Canola nucleus 18.83 20.07
CDY48008 Canola nucleus 18.83 20.07
CDX90001 Canola nucleus 21.3 20.06
CDY50908 Canola nucleus 19.44 20.0
CDY58763 Canola nucleus 18.52 18.87
CDY58764 Canola nucleus 18.52 18.75
CDY07140 Canola nucleus 17.59 18.63
CDY49614 Canola nucleus 17.28 18.06
CDY70080 Canola nucleus 9.26 12.55
CDX98911 Canola nucleus 9.26 12.55
Protein Annotations
MapMan:15.5.5.3MapMan:15.5.7.5Gene3D:2.40.330.10Gene3D:3.30.730.10GO:A0A078D359InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sfInterPro:B3_DNA-bdEnsemblPlants:CDX83547ProteinID:CDX83547ProteinID:CDX83547.1InterPro:DNA-bd_dom_sf
InterPro:DNA-bd_pseudobarrel_sfGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00139176001InterPro:IPR001471InterPro:IPR003340InterPro:IPR015300InterPro:IPR036955PFAM:PF00847
PFAM:PF02362PFscan:PS50863PFscan:PS51032PANTHER:PTHR31140PANTHER:PTHR31140:SF9SMART:SM00380
SMART:SM01019SUPFAM:SSF101936SUPFAM:SSF54171UniParc:UPI0004EEEE2ASEG:seg:
Description
BnaC07g22870D
Coordinates
chrLK031833:+:501940..503377
Molecular Weight (calculated)
36596.3 Da
IEP (calculated)
9.712
GRAVY (calculated)
-0.590
Length
324 amino acids
Sequence
(BLAST)
001: MDAASSVDES STSTDSVHTP AKIPPATARK SSSPASLYRM GSGSSVVLDS ENGVEAESRK LPSSRFKGVV PQPNGRWGAQ IYEKHQRVWL GTFNEEDEAA
101: RAYDVAAHRF RGRDAVTNFK ADTTLDNGDE IEFLNAHSKA EIVDMLRKHT YREELEQMKR NLHGKGNTKE TAFAAVRIAT GFKTAETLFE KAVTPRDVSV
201: RLTLLNFEDV NGKVWRFRYS YWNSSQSYVL TKGWSRFVKE KRLCAGDLIS FKRSNGQDQQ LYIGWKSKCE SDQDTGRVVV RLFGVDITSL KSQNDLVMKE
301: ETEMLSLRCN KKQRLLVIKM GLFV
Best Arabidopsis Sequence Match ( AT3G25730.1 )
(BLAST)
001: MDAMSSVDES STTTDSIPAR KSSSPASLLY RMGSGTSVVL DSENGVEVEV EAESRKLPSS RFKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEDEAARAYD
101: VAAHRFRGRD AVTNFKDTTF EEEVEFLNAH SKSEIVDMLR KHTYKEELDQ RKRNRDGNGK ETTAFALASM VVMTGFKTAE LLFEKTVTPS DVGKLNRLVI
201: PKHQAEKHFP LPLGNNNVSV KGMLLNFEDV NGKVWRFRYS YWNSSQSYVL TKGWSRFVKE KRLCAGDLIS FKRSNDQDQK FFIGWKSKSG LDLETGRVMR
301: LFGVDISLNA VVVVKETTEV LMSSLRCKKQ RVL
Arabidopsis Description
ARF14AP2/ERF and B3 domain-containing transcription factor ARF14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS06]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.